RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 CT47B1P0C2W7 299 aaPredicted RBP9.68□□□□□ -0.86
BRCC3-208ENST00000453705 RAD51AP2Q09MP3 1159 aa9.68□□□□□ -0.86
BRCC3-208ENST00000453705 HDGFL1Q5TGJ6 251 aa9.68□□□□□ -0.86
BRCC3-208ENST00000453705 MTMR14Q8NCE2 650 aa9.68□□□□□ -0.86
BRCC3-208ENST00000453705 ENOX1Q8TC92 643 aaKnown RBP9.68□□□□□ -0.86
BRCC3-208ENST00000453705 IL17RAQ96F46 866 aa9.68□□□□□ -0.86
BRCC3-208ENST00000453705 MPHOSPH6Q99547 160 aaKnown RBP9.68□□□□□ -0.86
BRCC3-208ENST00000453705 PCDH12Q9NPG4 1184 aa9.68□□□□□ -0.86
BRCC3-208ENST00000453705 IFT57Q9NWB7 429 aa9.68□□□□□ -0.86
BRCC3-208ENST00000453705 EGFL6Q8IUX8 553 aa9.67□□□□□ -0.86
BRCC3-208ENST00000453705 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
BRCC3-208ENST00000453705 PLEKHH1Q9ULM0 1364 aa9.67□□□□□ -0.86
BRCC3-208ENST00000453705 WASLO00401 505 aaPredicted RBP9.67□□□□□ -0.86
BRCC3-208ENST00000453705 INO80BQ9C086 356 aaPredicted RBP9.67□□□□□ -0.86
BRCC3-208ENST00000453705 SLC12A5Q9H2X9 1139 aa9.67□□□□□ -0.86
BRCC3-208ENST00000453705 ROBO2Q9HCK4 1378 aa9.66□□□□□ -0.86
BRCC3-208ENST00000453705 TNNI2P48788 182 aa9.66□□□□□ -0.86
BRCC3-208ENST00000453705 FILIP1Q7Z7B0 1213 aa9.66□□□□□ -0.86
BRCC3-208ENST00000453705 CHST12Q9NRB3 414 aa9.66□□□□□ -0.86
BRCC3-208ENST00000453705 SH3D19Q5HYK7 790 aa9.66□□□□□ -0.86
BRCC3-208ENST00000453705 ZNF513Q8N8E2 541 aaPredicted RBP9.66□□□□□ -0.86
BRCC3-208ENST00000453705 CDK19Q9BWU1 502 aa9.66□□□□□ -0.86
BRCC3-208ENST00000453705 PPIP5K1Q6PFW1 1433 aa9.66□□□□□ -0.86
BRCC3-208ENST00000453705 LTKP29376 864 aa9.65□□□□□ -0.86
BRCC3-208ENST00000453705 PUS10Q3MIT2 529 aaKnown RBP9.65□□□□□ -0.86
BRCC3-208ENST00000453705 HDGFL2Q7Z4V5 671 aaPredicted RBP9.65□□□□□ -0.86
BRCC3-208ENST00000453705 POGKQ9P215 609 aa9.65□□□□□ -0.86
BRCC3-208ENST00000453705 RGPD8O14715 1765 aaPredicted RBP9.65□□□□□ -0.86
BRCC3-208ENST00000453705 OVOS2A0A0J9YW53 1432 aa9.65□□□□□ -0.86
BRCC3-208ENST00000453705 OVOS2Q6IE36 1432 aa9.65□□□□□ -0.86
BRCC3-208ENST00000453705 TTC39BQ5VTQ0 682 aaPredicted RBP9.65□□□□□ -0.87
BRCC3-208ENST00000453705 SPC25Q9HBM1 224 aa9.65□□□□□ -0.87
BRCC3-208ENST00000453705 KIF1AQ12756 1690 aa9.64□□□□□ -0.87
BRCC3-208ENST00000453705 GOLIM4O00461 696 aa9.64□□□□□ -0.87
BRCC3-208ENST00000453705 S100BP04271 92 aaPredicted RBP9.64□□□□□ -0.87
BRCC3-208ENST00000453705 IBSPP21815 317 aaPredicted RBP9.64□□□□□ -0.87
BRCC3-208ENST00000453705 WDR43Q15061 677 aaKnown RBP eCLIP9.64□□□□□ -0.87
BRCC3-208ENST00000453705 NBPF20Q3BBV1 942 aa9.64□□□□□ -0.87
BRCC3-208ENST00000453705 PPP4R2Q9NY27 417 aa9.64□□□□□ -0.87
BRCC3-208ENST00000453705 TTF2Q9UNY4 1162 aaKnown RBP9.64□□□□□ -0.87
BRCC3-208ENST00000453705 ADAMTS8Q9UP79 889 aa9.64□□□□□ -0.87
BRCC3-208ENST00000453705 USP31Q70CQ4 1352 aa9.64□□□□□ -0.87
BRCC3-208ENST00000453705 LMOD1P29536 600 aaPredicted RBP9.64□□□□□ -0.87
BRCC3-208ENST00000453705 MARSP56192 900 aaKnown RBP9.64□□□□□ -0.87
BRCC3-208ENST00000453705 MORC1Q86VD1 984 aa9.64□□□□□ -0.87
BRCC3-208ENST00000453705 ANKLE2Q86XL3 938 aa9.64□□□□□ -0.87
BRCC3-208ENST00000453705 NT5DC4Q86YG4 428 aa9.64□□□□□ -0.87
BRCC3-208ENST00000453705 OTUD6BQ8N6M0 293 aa9.64□□□□□ -0.87
BRCC3-208ENST00000453705 NKTRP30414 1462 aaKnown RBP9.64□□□□□ -0.87
BRCC3-208ENST00000453705 MST1RQ04912 1400 aa9.63□□□□□ -0.87
BRCC3-208ENST00000453705 CBLBQ13191 982 aa9.63□□□□□ -0.87
BRCC3-208ENST00000453705 AXDND1Q5T1B0 1012 aaPredicted RBP9.63□□□□□ -0.87
BRCC3-208ENST00000453705 ICE2Q659A1 982 aa9.63□□□□□ -0.87
BRCC3-208ENST00000453705 TMC2Q8TDI7 906 aa9.63□□□□□ -0.87
BRCC3-208ENST00000453705 PAGR1Q9BTK6 254 aa9.63□□□□□ -0.87
BRCC3-208ENST00000453705 CABP2Q9NPB3 220 aa9.63□□□□□ -0.87
BRCC3-208ENST00000453705 DIS3Q9Y2L1 958 aaKnown RBP9.63□□□□□ -0.87
BRCC3-208ENST00000453705 FARP1Q9Y4F1 1045 aaPredicted RBP9.63□□□□□ -0.87
BRCC3-208ENST00000453705 PIK3C2AO00443 1686 aa9.63□□□□□ -0.87
BRCC3-208ENST00000453705 DYTNA2CJ06 578 aa9.63□□□□□ -0.87
BRCC3-208ENST00000453705 CALRP27797 417 aaKnown RBP9.63□□□□□ -0.87
BRCC3-208ENST00000453705 SKAP1Q86WV1 359 aa9.63□□□□□ -0.87
BRCC3-208ENST00000453705 TINF2Q9BSI4 451 aa9.63□□□□□ -0.87
BRCC3-208ENST00000453705 DDX56Q9NY93 547 aaKnown RBP9.63□□□□□ -0.87
BRCC3-208ENST00000453705 PDILTQ8N807 584 aa9.62□□□□□ -0.87
BRCC3-208ENST00000453705 CFAP53Q96M91 514 aa9.62□□□□□ -0.87
BRCC3-208ENST00000453705 RNF39Q9H2S5 420 aa9.62□□□□□ -0.87
BRCC3-208ENST00000453705 FYB1O15117 783 aa9.62□□□□□ -0.87
BRCC3-208ENST00000453705 PSEN1P49768 467 aa9.62□□□□□ -0.87
BRCC3-208ENST00000453705 SENP7Q9BQF6 1050 aa9.62□□□□□ -0.87
BRCC3-208ENST00000453705 LARP6Q9BRS8 491 aaKnown RBP9.62□□□□□ -0.87
BRCC3-208ENST00000453705 PPP1R12CQ9BZL4 782 aa9.62□□□□□ -0.87
BRCC3-208ENST00000453705 KIF24Q5T7B8 1368 aa9.62□□□□□ -0.87
BRCC3-208ENST00000453705 USP6P35125 1406 aa9.62□□□□□ -0.87
BRCC3-208ENST00000453705 NCOA3Q9Y6Q9 1424 aa9.62□□□□□ -0.87
BRCC3-208ENST00000453705 DHX8Q14562 1220 aaKnown RBP9.61□□□□□ -0.87
BRCC3-208ENST00000453705 DCAF8Q5TAQ9 597 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 SCYL1Q96KG9 808 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 STK26Q9P289 416 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 SWAP70Q9UH65 585 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 MINK1Q8N4C8 1332 aaPredicted RBP9.61□□□□□ -0.87
BRCC3-208ENST00000453705 DLG5Q8TDM6 1919 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 NPHP4O75161 1426 aaPredicted RBP9.61□□□□□ -0.87
BRCC3-208ENST00000453705 PEAK1Q9H792 1746 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 COPB2P35606 906 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 MAP2K5Q13163 448 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 RUNDC1Q96C34 613 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 TCEAL9Q9UHQ7 104 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 ZBTB12Q9Y330 459 aaPredicted RBP9.61□□□□□ -0.87
BRCC3-208ENST00000453705 NUB1Q9Y5A7 615 aa9.61□□□□□ -0.87
BRCC3-208ENST00000453705 FAM163BP0C2L3 166 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 SLFN5Q08AF3 891 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 LDLRAD1Q5T700 205 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 THRAP3Q9Y2W1 955 aaKnown RBP9.6□□□□□ -0.87
BRCC3-208ENST00000453705 CCDC61Q9Y6R9 512 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 IL16Q14005 1332 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 TTC21AQ8NDW8 1320 aa9.6□□□□□ -0.87
BRCC3-208ENST00000453705 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
BRCC3-208ENST00000453705 GIGYF1O75420 1035 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms