RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 RBM42Q9BTD8 480 aaKnown RBP24.78■■□□□ 1.56
HIGD1A-204ENST00000452906 CNTNAP4Q9C0A0 1308 aa24.78■■□□□ 1.56
HIGD1A-204ENST00000452906 PXDNLA1KZ92 1463 aa24.77■■□□□ 1.56
HIGD1A-204ENST00000452906 TCERG1O14776 1098 aaKnown RBP24.77■■□□□ 1.56
HIGD1A-204ENST00000452906 RC3H1Q5TC82 1133 aaKnown RBP24.77■■□□□ 1.56
HIGD1A-204ENST00000452906 GOLGB1Q14789 3259 aaKnown RBP24.76■■□□□ 1.55
HIGD1A-204ENST00000452906 KCNQ3O43525 872 aa24.76■■□□□ 1.55
HIGD1A-204ENST00000452906 ADRA2BP18089 450 aa24.76■■□□□ 1.55
HIGD1A-204ENST00000452906 TMEM57Q8N5G2 664 aa24.76■■□□□ 1.55
HIGD1A-204ENST00000452906 ZNF784Q8NCA9 323 aaPredicted RBP24.76■■□□□ 1.55
HIGD1A-204ENST00000452906 SLC4A9Q96Q91 983 aa24.76■■□□□ 1.55
HIGD1A-204ENST00000452906 DBF4Q9UBU7 674 aaPredicted RBP24.76■■□□□ 1.55
HIGD1A-204ENST00000452906 RTCBQ9Y3I0 505 aaKnown RBP24.76■■□□□ 1.55
HIGD1A-204ENST00000452906 GRIN3BO60391 1043 aa24.75■■□□□ 1.55
HIGD1A-204ENST00000452906 SNRPA1P09661 255 aaKnown RBP24.75■■□□□ 1.55
HIGD1A-204ENST00000452906 C4AP0C0L4 1744 aa24.75■■□□□ 1.55
HIGD1A-204ENST00000452906 TJP1Q07157 1748 aa24.75■■□□□ 1.55
HIGD1A-204ENST00000452906 FLIIQ13045 1269 aa24.74■■□□□ 1.55
HIGD1A-204ENST00000452906 SMIM5Q71RC9 77 aa24.74■■□□□ 1.55
HIGD1A-204ENST00000452906 TNNQ9UQP3 1299 aa24.74■■□□□ 1.55
HIGD1A-204ENST00000452906 KIF13BQ9NQT8 1826 aa24.74■■□□□ 1.55
HIGD1A-204ENST00000452906 EIF2S2P20042 333 aaKnown RBP24.73■■□□□ 1.55
HIGD1A-204ENST00000452906 SLC39A6Q13433 755 aa24.73■■□□□ 1.55
HIGD1A-204ENST00000452906 TRAPPC3LQ5T215 181 aa24.73■■□□□ 1.55
HIGD1A-204ENST00000452906 ERBB4Q15303 1308 aa24.72■■□□□ 1.55
HIGD1A-204ENST00000452906 INTS3Q68E01 1043 aaKnown RBP24.72■■□□□ 1.55
HIGD1A-204ENST00000452906 CENPQQ7L2Z9 268 aaPredicted RBP24.72■■□□□ 1.55
HIGD1A-204ENST00000452906 KCPQ6ZWJ8 1503 aa24.71■■□□□ 1.55
HIGD1A-204ENST00000452906 YBX3P16989 372 aaKnown RBP eCLIP24.71■■□□□ 1.55
HIGD1A-204ENST00000452906 CCT4P50991 539 aaKnown RBP24.71■■□□□ 1.55
HIGD1A-204ENST00000452906 ZNF496Q96IT1 587 aaPredicted RBP24.71■■□□□ 1.55
HIGD1A-204ENST00000452906 HYPKQ9NX55 129 aa24.71■■□□□ 1.55
HIGD1A-204ENST00000452906 PTCD1O75127 700 aaKnown RBP24.7■■□□□ 1.54
HIGD1A-204ENST00000452906 RPS6KA4O75676 772 aa24.7■■□□□ 1.54
HIGD1A-204ENST00000452906 FKBP5Q13451 457 aaPredicted RBP24.7■■□□□ 1.54
HIGD1A-204ENST00000452906 NLGN1Q8N2Q7 840 aa24.69■■□□□ 1.54
HIGD1A-204ENST00000452906 NECTIN2Q92692 538 aa24.69■■□□□ 1.54
HIGD1A-204ENST00000452906 CHPF2Q9P2E5 772 aa24.69■■□□□ 1.54
HIGD1A-204ENST00000452906 DDX21Q9NR30 783 aaKnown RBP eCLIP24.68■■□□□ 1.54
HIGD1A-204ENST00000452906 ARHGEF1Q92888 912 aaKnown RBP24.67■■□□□ 1.54
HIGD1A-204ENST00000452906 TEX13AQ9BXU3 409 aaPredicted RBP24.67■■□□□ 1.54
HIGD1A-204ENST00000452906 DDX58O95786 925 aaKnown RBP24.66■■□□□ 1.54
HIGD1A-204ENST00000452906 MMP10P09238 476 aa24.66■■□□□ 1.54
HIGD1A-204ENST00000452906 RFC4P35249 363 aa24.66■■□□□ 1.54
HIGD1A-204ENST00000452906 VSIG10Q8N0Z9 540 aa24.66■■□□□ 1.54
HIGD1A-204ENST00000452906 RWDD1Q9H446 243 aaPredicted RBP24.66■■□□□ 1.54
HIGD1A-204ENST00000452906 ZBTB40Q9NUA8 1239 aa24.66■■□□□ 1.54
HIGD1A-204ENST00000452906 CRKLP46109 303 aaKnown RBP24.65■■□□□ 1.54
HIGD1A-204ENST00000452906 G2E3Q7L622 706 aa24.65■■□□□ 1.54
HIGD1A-204ENST00000452906 KIAA1551Q9HCM1 1747 aa24.64■■□□□ 1.53
HIGD1A-204ENST00000452906 KDM2BQ8NHM5 1336 aa24.63■■□□□ 1.53
HIGD1A-204ENST00000452906 ZBTB7BO15156 539 aaPredicted RBP24.62■■□□□ 1.53
HIGD1A-204ENST00000452906 GYS1P13807 737 aa24.62■■□□□ 1.53
HIGD1A-204ENST00000452906 C10orf71Q711Q0 1435 aa24.61■■□□□ 1.53
HIGD1A-204ENST00000452906 ATP10DQ9P241 1426 aa24.61■■□□□ 1.53
HIGD1A-204ENST00000452906 SLC4A10Q6U841 1118 aa24.6■■□□□ 1.53
HIGD1A-204ENST00000452906 PHAXQ9H814 394 aaKnown RBP24.59■■□□□ 1.53
HIGD1A-204ENST00000452906 BRCA1P38398 1863 aaKnown RBP24.59■■□□□ 1.53
HIGD1A-204ENST00000452906 USP42Q9H9J4 1324 aaKnown RBP24.59■■□□□ 1.53
HIGD1A-204ENST00000452906 GNAI3P08754 354 aa24.58■■□□□ 1.53
HIGD1A-204ENST00000452906 TGFB2P61812 414 aa24.58■■□□□ 1.53
HIGD1A-204ENST00000452906 HDAC1Q13547 482 aaPredicted RBP24.58■■□□□ 1.53
HIGD1A-204ENST00000452906 INTS5Q6P9B9 1019 aaKnown RBP24.58■■□□□ 1.53
HIGD1A-204ENST00000452906 DNAAF4Q8WXU2 420 aa24.58■■□□□ 1.53
HIGD1A-204ENST00000452906 CCDC87Q9NVE4 849 aa24.58■■□□□ 1.53
HIGD1A-204ENST00000452906 IBTKQ9P2D0 1353 aaPredicted RBP24.57■■□□□ 1.52
HIGD1A-204ENST00000452906 PRAMEF22A3QJZ6 481 aa24.57■■□□□ 1.52
HIGD1A-204ENST00000452906 KSR2Q6VAB6 950 aa24.57■■□□□ 1.52
HIGD1A-204ENST00000452906 DNAJC10Q8IXB1 793 aa24.57■■□□□ 1.52
HIGD1A-204ENST00000452906 PARP3Q9Y6F1 533 aa24.57■■□□□ 1.52
HIGD1A-204ENST00000452906 STARD3NLO95772 234 aa24.56■■□□□ 1.52
HIGD1A-204ENST00000452906 HDAC5Q9UQL6 1122 aa24.56■■□□□ 1.52
HIGD1A-204ENST00000452906 PCDHB15Q9Y5E8 787 aa24.56■■□□□ 1.52
HIGD1A-204ENST00000452906 USP16Q9Y5T5 823 aa24.56■■□□□ 1.52
HIGD1A-204ENST00000452906 F6X3S4 739 aa24.55■■□□□ 1.52
HIGD1A-204ENST00000452906 CYP19A1P11511 503 aaPredicted RBP24.55■■□□□ 1.52
HIGD1A-204ENST00000452906 PDIA6Q15084 440 aa24.55■■□□□ 1.52
HIGD1A-204ENST00000452906 SRCIN1Q9C0H9 1055 aa24.55■■□□□ 1.52
HIGD1A-204ENST00000452906 ALDH1L1O75891 902 aa24.54■■□□□ 1.52
HIGD1A-204ENST00000452906 ADCY9O60503 1353 aa24.54■■□□□ 1.52
HIGD1A-204ENST00000452906 PI4KAP2A4QPH2 592 aa24.53■■□□□ 1.52
HIGD1A-204ENST00000452906 PROSER3Q2NL68 480 aa24.53■■□□□ 1.52
HIGD1A-204ENST00000452906 PI4KAP1Q8N8J0 262 aa24.53■■□□□ 1.52
HIGD1A-204ENST00000452906 ARFGEF2Q9Y6D5 1785 aa24.52■■□□□ 1.52
HIGD1A-204ENST00000452906 ARFGEF1Q9Y6D6 1849 aa24.52■■□□□ 1.52
HIGD1A-204ENST00000452906 NEXNQ0ZGT2 675 aa24.52■■□□□ 1.52
HIGD1A-204ENST00000452906 RPAP2Q8IXW5 612 aaPredicted RBP24.52■■□□□ 1.52
HIGD1A-204ENST00000452906 SRP68Q9UHB9 627 aaKnown RBP24.52■■□□□ 1.52
HIGD1A-204ENST00000452906 ANXA1P04083 346 aa24.51■■□□□ 1.51
HIGD1A-204ENST00000452906 MYL6BP14649 208 aa24.51■■□□□ 1.51
HIGD1A-204ENST00000452906 ZPR1O75312 459 aa24.5■■□□□ 1.51
HIGD1A-204ENST00000452906 XAGE3Q8WTP9 111 aa24.5■■□□□ 1.51
HIGD1A-204ENST00000452906 MAP3K2Q9Y2U5 619 aa24.5■■□□□ 1.51
HIGD1A-204ENST00000452906 COL15A1P39059 1388 aa24.5■■□□□ 1.51
HIGD1A-204ENST00000452906 IGHDP01880 384 aa24.49■■□□□ 1.51
HIGD1A-204ENST00000452906 GNAI2P04899 355 aa24.49■■□□□ 1.51
HIGD1A-204ENST00000452906 C1QTNF8P60827 252 aa24.49■■□□□ 1.51
HIGD1A-204ENST00000452906 RIC3Q7Z5B4 369 aa24.49■■□□□ 1.51
HIGD1A-204ENST00000452906 AFDNP55196 1824 aaKnown RBP24.49■■□□□ 1.51
HIGD1A-204ENST00000452906 HMMRO75330 724 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms