RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 TTC31Q49AM3 519 aaPredicted RBP21.99■■□□□ 1.11
PTPA-223ENST00000452489 IL17RAQ96F46 866 aa21.99■■□□□ 1.11
PTPA-223ENST00000452489 MAP3K4Q9Y6R4 1608 aa21.98■■□□□ 1.11
PTPA-223ENST00000452489 MEIS3Q99687 375 aa21.98■■□□□ 1.11
PTPA-223ENST00000452489 ARGLU1Q9NWB6 273 aaPredicted RBP21.98■■□□□ 1.11
PTPA-223ENST00000452489 PREX2Q70Z35 1606 aa21.98■■□□□ 1.11
PTPA-223ENST00000452489 NSD2O96028 1365 aa21.97■■□□□ 1.11
PTPA-223ENST00000452489 PRKAR2BP31323 418 aa21.97■■□□□ 1.11
PTPA-223ENST00000452489 SMC1AQ14683 1233 aaKnown RBP21.97■■□□□ 1.11
PTPA-223ENST00000452489 AXDND1Q5T1B0 1012 aaPredicted RBP21.97■■□□□ 1.11
PTPA-223ENST00000452489 TBC1D8O95759 1140 aa21.97■■□□□ 1.11
PTPA-223ENST00000452489 UNC5CLQ8IV45 518 aa21.97■■□□□ 1.11
PTPA-223ENST00000452489 CCDC83Q8IWF9 413 aa21.97■■□□□ 1.11
PTPA-223ENST00000452489 TTC14Q96N46 770 aa21.97■■□□□ 1.11
PTPA-223ENST00000452489 EPC1Q9H2F5 836 aa21.97■■□□□ 1.11
PTPA-223ENST00000452489 KIF24Q5T7B8 1368 aa21.96■■□□□ 1.11
PTPA-223ENST00000452489 ELP1O95163 1332 aa21.96■■□□□ 1.11
PTPA-223ENST00000452489 CPA1P15085 419 aa21.96■■□□□ 1.11
PTPA-223ENST00000452489 HSPA4P34932 840 aa21.96■■□□□ 1.11
PTPA-223ENST00000452489 UBXN4Q92575 508 aa21.96■■□□□ 1.11
PTPA-223ENST00000452489 MSH6P52701 1360 aa21.96■■□□□ 1.11
PTPA-223ENST00000452489 CARMIL2Q6F5E8 1435 aa21.96■■□□□ 1.11
PTPA-223ENST00000452489 DIAPH1O60610 1272 aaKnown RBP21.96■■□□□ 1.11
PTPA-223ENST00000452489 E2F4Q16254 413 aa21.96■■□□□ 1.11
PTPA-223ENST00000452489 FERMT3Q86UX7 667 aa21.96■■□□□ 1.11
PTPA-223ENST00000452489 LIMCH1Q9UPQ0 1083 aa21.96■■□□□ 1.11
PTPA-223ENST00000452489 KIF2AO00139 706 aaPredicted RBP21.95■■□□□ 1.1
PTPA-223ENST00000452489 BANK1Q8NDB2 785 aa21.95■■□□□ 1.1
PTPA-223ENST00000452489 E4F1Q66K89 784 aaPredicted RBP21.95■■□□□ 1.1
PTPA-223ENST00000452489 MRFAP1L1Q96HT8 127 aa21.95■■□□□ 1.1
PTPA-223ENST00000452489 PHACTR3Q96KR7 559 aa21.95■■□□□ 1.1
PTPA-223ENST00000452489 ATP2B1P20020 1258 aa21.94■■□□□ 1.1
PTPA-223ENST00000452489 PPP1R13BQ96KQ4 1090 aa21.94■■□□□ 1.1
PTPA-223ENST00000452489 AK7Q96M32 723 aa21.94■■□□□ 1.1
PTPA-223ENST00000452489 SSH2Q76I76 1423 aa21.94■■□□□ 1.1
PTPA-223ENST00000452489 ADAM21Q9UKJ8 722 aa21.94■■□□□ 1.1
PTPA-223ENST00000452489 FOXR1Q6PIV2 292 aa21.93■■□□□ 1.1
PTPA-223ENST00000452489 RBM43Q6ZSC3 357 aaKnown RBP21.93■■□□□ 1.1
PTPA-223ENST00000452489 CLSTN2Q9H4D0 955 aa21.93■■□□□ 1.1
PTPA-223ENST00000452489 LRRC7Q96NW7 1537 aa21.93■■□□□ 1.1
PTPA-223ENST00000452489 GOLGA6L19H0YKK7 550 aa21.92■■□□□ 1.1
PTPA-223ENST00000452489 GNAI1P63096 354 aa21.92■■□□□ 1.1
PTPA-223ENST00000452489 SNX14Q9Y5W7 946 aa21.92■■□□□ 1.1
PTPA-223ENST00000452489 NR1I2O75469 434 aa21.92■■□□□ 1.1
PTPA-223ENST00000452489 ACTN2P35609 894 aa21.92■■□□□ 1.1
PTPA-223ENST00000452489 MAGEA9P43362 315 aa21.92■■□□□ 1.1
PTPA-223ENST00000452489 KRT85P78386 507 aa21.92■■□□□ 1.1
PTPA-223ENST00000452489 IQCB1Q15051 598 aa21.92■■□□□ 1.1
PTPA-223ENST00000452489 SARM1Q6SZW1 724 aa21.92■■□□□ 1.1
PTPA-223ENST00000452489 C11orf57Q6ZUT1 292 aaPredicted RBP21.92■■□□□ 1.1
PTPA-223ENST00000452489 PLCH2O75038 1416 aa21.92■■□□□ 1.1
PTPA-223ENST00000452489 ARHGAP5Q13017 1502 aa21.91■■□□□ 1.1
PTPA-223ENST00000452489 NOM1Q5C9Z4 860 aaKnown RBP21.91■■□□□ 1.1
PTPA-223ENST00000452489 RASEFQ8IZ41 740 aa21.91■■□□□ 1.1
PTPA-223ENST00000452489 ZNF622Q969S3 477 aaKnown RBP eCLIP21.91■■□□□ 1.1
PTPA-223ENST00000452489 KCND1Q9NSA2 647 aa21.91■■□□□ 1.1
PTPA-223ENST00000452489 CEP83Q9Y592 693 aa21.91■■□□□ 1.1
PTPA-223ENST00000452489 SALL3Q9BXA9 1300 aa21.91■■□□□ 1.1
PTPA-223ENST00000452489 QRICH2Q9H0J4 1663 aa21.91■■□□□ 1.1
PTPA-223ENST00000452489 CCDC172P0C7W6 258 aa21.9■■□□□ 1.1
PTPA-223ENST00000452489 IQUBQ8NA54 791 aa21.9■■□□□ 1.1
PTPA-223ENST00000452489 EXOC4Q96A65 974 aa21.9■■□□□ 1.1
PTPA-223ENST00000452489 TTC21BQ7Z4L5 1316 aa21.9■■□□□ 1.1
PTPA-223ENST00000452489 UGGT1Q9NYU2 1555 aa21.9■■□□□ 1.1
PTPA-223ENST00000452489 GOLGA6L4A6NEF3 574 aa21.9■■□□□ 1.1
PTPA-223ENST00000452489 DDX19AQ9NUU7 478 aaKnown RBP21.9■■□□□ 1.1
PTPA-223ENST00000452489 TFIP11Q9UBB9 837 aaKnown RBP21.9■■□□□ 1.1
PTPA-223ENST00000452489 ANKRD65E5RJM6 399 aa21.89■■□□□ 1.1
PTPA-223ENST00000452489 CC2D1AQ6P1N0 951 aaPredicted RBP21.89■■□□□ 1.1
PTPA-223ENST00000452489 ZNF853P0CG23 659 aa21.89■■□□□ 1.09
PTPA-223ENST00000452489 TMEM132EQ6IEE7 984 aa21.89■■□□□ 1.09
PTPA-223ENST00000452489 CDC37L1Q7L3B6 337 aa21.89■■□□□ 1.09
PTPA-223ENST00000452489 DEF6Q9H4E7 631 aa21.89■■□□□ 1.09
PTPA-223ENST00000452489 EIF3CLB5ME19 914 aaKnown RBP21.88■■□□□ 1.09
PTPA-223ENST00000452489 H3BQF6 201 aa21.88■■□□□ 1.09
PTPA-223ENST00000452489 FCHSD2O94868 740 aa21.88■■□□□ 1.09
PTPA-223ENST00000452489 GNAI3P08754 354 aa21.88■■□□□ 1.09
PTPA-223ENST00000452489 HMOX1P09601 288 aa21.88■■□□□ 1.09
PTPA-223ENST00000452489 EIF3CQ99613 913 aaKnown RBP21.88■■□□□ 1.09
PTPA-223ENST00000452489 A0A087WWV3 80 aa21.88■■□□□ 1.09
PTPA-223ENST00000452489 TADA3O75528 432 aa21.88■■□□□ 1.09
PTPA-223ENST00000452489 NFE2L2Q16236 605 aa21.88■■□□□ 1.09
PTPA-223ENST00000452489 MNS1Q8NEH6 495 aa21.88■■□□□ 1.09
PTPA-223ENST00000452489 TTC21AQ8NDW8 1320 aa21.88■■□□□ 1.09
PTPA-223ENST00000452489 ATP8B1O43520 1251 aa21.87■■□□□ 1.09
PTPA-223ENST00000452489 ST3GAL1Q11201 340 aa21.87■■□□□ 1.09
PTPA-223ENST00000452489 CABP2Q9NPB3 220 aa21.87■■□□□ 1.09
PTPA-223ENST00000452489 PSD3Q9NYI0 1048 aa21.87■■□□□ 1.09
PTPA-223ENST00000452489 ZC3H13Q5T200 1668 aaKnown RBP21.87■■□□□ 1.09
PTPA-223ENST00000452489 CNPY4Q8N129 248 aa21.87■■□□□ 1.09
PTPA-223ENST00000452489 CARD6Q9BX69 1037 aa21.87■■□□□ 1.09
PTPA-223ENST00000452489 DNAI1Q9UI46 699 aa21.87■■□□□ 1.09
PTPA-223ENST00000452489 FANCAO15360 1455 aa21.86■■□□□ 1.09
PTPA-223ENST00000452489 HMMRO75330 724 aa21.86■■□□□ 1.09
PTPA-223ENST00000452489 SPATA32Q96LK8 384 aa21.86■■□□□ 1.09
PTPA-223ENST00000452489 HYPKQ9NX55 129 aa21.86■■□□□ 1.09
PTPA-223ENST00000452489 LEKR1Q6ZMV7 388 aa21.85■■□□□ 1.09
PTPA-223ENST00000452489 NECAB1Q8N987 351 aa21.85■■□□□ 1.09
PTPA-223ENST00000452489 CXorf56Q9H5V9 222 aa21.85■■□□□ 1.09
PTPA-223ENST00000452489 KIAA0232Q92628 1395 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms