RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-202ENST00000451716 ALDH1L1O75891 902 aa14.69□□□□□ -0.06
COL27A1-202ENST00000451716 COPS6Q7L5N1 327 aa14.69□□□□□ -0.06
COL27A1-202ENST00000451716 XAGE3Q8WTP9 111 aa14.69□□□□□ -0.06
COL27A1-202ENST00000451716 SPATA31A3Q5VYP0 1347 aa14.69□□□□□ -0.06
COL27A1-202ENST00000451716 GRM8O00222 908 aa14.69□□□□□ -0.06
COL27A1-202ENST00000451716 IGKV5-2P06315 115 aa14.69□□□□□ -0.06
COL27A1-202ENST00000451716 LINS1Q8NG48 757 aa14.69□□□□□ -0.06
COL27A1-202ENST00000451716 BICC1Q9H694 974 aaKnown RBP14.69□□□□□ -0.06
COL27A1-202ENST00000451716 TNS3Q68CZ2 1445 aa14.69□□□□□ -0.06
COL27A1-202ENST00000451716 KLHDC4Q8TBB5 520 aa14.68□□□□□ -0.06
COL27A1-202ENST00000451716 UPF3BQ9BZI7 483 aaKnown RBP14.68□□□□□ -0.06
COL27A1-202ENST00000451716 TUBGCP6Q96RT7 1819 aa14.68□□□□□ -0.06
COL27A1-202ENST00000451716 DDX58O95786 925 aaKnown RBP14.68□□□□□ -0.06
COL27A1-202ENST00000451716 SIL1Q9H173 461 aa14.68□□□□□ -0.06
COL27A1-202ENST00000451716 BRINP3Q76B58 766 aa14.67□□□□□ -0.06
COL27A1-202ENST00000451716 SIPA1L3O60292 1781 aaPredicted RBP14.67□□□□□ -0.06
COL27A1-202ENST00000451716 MTX1Q13505 466 aa14.67□□□□□ -0.06
COL27A1-202ENST00000451716 TTC5Q8N0Z6 440 aa14.67□□□□□ -0.06
COL27A1-202ENST00000451716 MYD88Q99836 296 aa14.67□□□□□ -0.06
COL27A1-202ENST00000451716 AOX1Q06278 1338 aa14.67□□□□□ -0.06
COL27A1-202ENST00000451716 HSP90AB4PQ58FF6 505 aa14.67□□□□□ -0.06
COL27A1-202ENST00000451716 CWC27Q6UX04 472 aaKnown RBP14.67□□□□□ -0.06
COL27A1-202ENST00000451716 CLASRPQ8N2M8 674 aaKnown RBP14.67□□□□□ -0.06
COL27A1-202ENST00000451716 FOXD4L5Q5VV16 416 aaPredicted RBP14.66□□□□□ -0.06
COL27A1-202ENST00000451716 PLCD3Q8N3E9 789 aa14.66□□□□□ -0.06
COL27A1-202ENST00000451716 FOXD4L4Q8WXT5 416 aaPredicted RBP14.66□□□□□ -0.06
COL27A1-202ENST00000451716 CHAMP1Q96JM3 812 aa14.66□□□□□ -0.06
COL27A1-202ENST00000451716 MCCP23508 829 aa14.66□□□□□ -0.06
COL27A1-202ENST00000451716 DCAF5Q96JK2 942 aa14.66□□□□□ -0.06
COL27A1-202ENST00000451716 DCCP43146 1447 aa14.65□□□□□ -0.06
COL27A1-202ENST00000451716 COL18A1P39060 1754 aa14.65□□□□□ -0.06
COL27A1-202ENST00000451716 CABP4P57796 275 aa14.65□□□□□ -0.06
COL27A1-202ENST00000451716 TMX3Q96JJ7 454 aa14.65□□□□□ -0.06
COL27A1-202ENST00000451716 PRDM11Q9NQV5 511 aa14.65□□□□□ -0.06
COL27A1-202ENST00000451716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.65□□□□□ -0.061e-16■□□□□ 10.1
COL27A1-202ENST00000451716 GOLGA6L3A6NEY3 463 aa14.65□□□□□ -0.06
COL27A1-202ENST00000451716 BAG4O95429 457 aaKnown RBP14.65□□□□□ -0.06
COL27A1-202ENST00000451716 EPHA10Q5JZY3 1008 aa14.65□□□□□ -0.06
COL27A1-202ENST00000451716 AACSQ86V21 672 aa14.65□□□□□ -0.06
COL27A1-202ENST00000451716 NEURL1BA8MQ27 555 aa14.64□□□□□ -0.07
COL27A1-202ENST00000451716 SNRPA1P09661 255 aaKnown RBP14.64□□□□□ -0.07
COL27A1-202ENST00000451716 IFIT2P09913 472 aaKnown RBP14.64□□□□□ -0.07
COL27A1-202ENST00000451716 LARP1Q6PKG0 1096 aaKnown RBP14.64□□□□□ -0.07
COL27A1-202ENST00000451716 CNTROBQ8N137 903 aa14.64□□□□□ -0.07
COL27A1-202ENST00000451716 C5P01031 1676 aa14.64□□□□□ -0.07
COL27A1-202ENST00000451716 ATP5J2-PTCD1G3V325 749 aa14.64□□□□□ -0.07
COL27A1-202ENST00000451716 PTCD1O75127 700 aaKnown RBP14.64□□□□□ -0.07
COL27A1-202ENST00000451716 SASH1O94885 1247 aa14.64□□□□□ -0.07
COL27A1-202ENST00000451716 NEXNQ0ZGT2 675 aa14.64□□□□□ -0.07
COL27A1-202ENST00000451716 TOM1L2Q6ZVM7 507 aa14.64□□□□□ -0.07
COL27A1-202ENST00000451716 CCDC8Q9H0W5 538 aaPredicted RBP14.64□□□□□ -0.07
COL27A1-202ENST00000451716 SCN11AQ9UI33 1791 aa14.64□□□□□ -0.07
COL27A1-202ENST00000451716 ADAMTS7Q9UKP4 1686 aa14.64□□□□□ -0.07
COL27A1-202ENST00000451716 XRCC6P12956 609 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL27A1-202ENST00000451716 MCTP1Q6DN14 999 aa14.63□□□□□ -0.07
COL27A1-202ENST00000451716 ANKRD13DQ6ZTN6 518 aa14.63□□□□□ -0.07
COL27A1-202ENST00000451716 PANK2Q9BZ23 570 aa14.63□□□□□ -0.07
COL27A1-202ENST00000451716 SGSM2O43147 1006 aa14.63□□□□□ -0.07
COL27A1-202ENST00000451716 GCKRQ14397 625 aa14.63□□□□□ -0.07
COL27A1-202ENST00000451716 FMNL2Q96PY5 1086 aa14.63□□□□□ -0.07
COL27A1-202ENST00000451716 TLR7Q9NYK1 1049 aaKnown RBP14.63□□□□□ -0.07
COL27A1-202ENST00000451716 GLRX3O76003 335 aaKnown RBP14.63□□□□□ -0.07
COL27A1-202ENST00000451716 LRP10Q7Z4F1 713 aa14.63□□□□□ -0.07
COL27A1-202ENST00000451716 EAF2Q96CJ1 260 aaPredicted RBP14.63□□□□□ -0.07
COL27A1-202ENST00000451716 ECHDC1Q9NTX5 307 aa14.63□□□□□ -0.07
COL27A1-202ENST00000451716 FSD2A1L4K1 749 aa14.62□□□□□ -0.07
COL27A1-202ENST00000451716 G3BP1Q13283 466 aaKnown RBP eCLIP14.62□□□□□ -0.07
COL27A1-202ENST00000451716 SECISBP2LQ93073 1101 aaKnown RBP14.62□□□□□ -0.07
COL27A1-202ENST00000451716 LARP6Q9BRS8 491 aaKnown RBP14.62□□□□□ -0.07
COL27A1-202ENST00000451716 METTL22Q9BUU2 404 aaPredicted RBP14.62□□□□□ -0.07
COL27A1-202ENST00000451716 ZDHHC9Q9Y397 364 aa14.62□□□□□ -0.07
COL27A1-202ENST00000451716 ZNF335Q9H4Z2 1342 aaPredicted RBP14.62□□□□□ -0.07
COL27A1-202ENST00000451716 NUCB2P80303 420 aa14.62□□□□□ -0.07
COL27A1-202ENST00000451716 UTYO14607 1347 aa14.62□□□□□ -0.07
COL27A1-202ENST00000451716 CYP2E1P05181 493 aaPredicted RBP14.61□□□□□ -0.07
COL27A1-202ENST00000451716 L1TD1Q5T7N2 865 aaKnown RBP14.61□□□□□ -0.07
COL27A1-202ENST00000451716 DDX54Q8TDD1 881 aaKnown RBP14.61□□□□□ -0.07
COL27A1-202ENST00000451716 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
COL27A1-202ENST00000451716 CRYBG1Q9Y4K1 1723 aa14.61□□□□□ -0.07
COL27A1-202ENST00000451716 HSPA4P34932 840 aa14.61□□□□□ -0.07
COL27A1-202ENST00000451716 ANAPC15P60006 121 aa14.61□□□□□ -0.07
COL27A1-202ENST00000451716 RASEFQ8IZ41 740 aa14.61□□□□□ -0.07
COL27A1-202ENST00000451716 PDCL3Q9H2J4 239 aa14.61□□□□□ -0.07
COL27A1-202ENST00000451716 CWC22Q9HCG8 908 aaKnown RBP14.61□□□□□ -0.07
COL27A1-202ENST00000451716 SLAIN2Q9P270 581 aa14.61□□□□□ -0.07
COL27A1-202ENST00000451716 TTC41PQ6P2S7 1318 aa14.61□□□□□ -0.07
COL27A1-202ENST00000451716 UBE3BQ7Z3V4 1068 aa14.6□□□□□ -0.07
COL27A1-202ENST00000451716 ERC1Q8IUD2 1116 aa14.6□□□□□ -0.07
COL27A1-202ENST00000451716 LSG1Q9H089 658 aaKnown RBP14.6□□□□□ -0.07
COL27A1-202ENST00000451716 DIAPH3Q9NSV4 1193 aa14.6□□□□□ -0.07
COL27A1-202ENST00000451716 HDAC5Q9UQL6 1122 aa14.6□□□□□ -0.07
COL27A1-202ENST00000451716 GOLGA6L22H0YM25 854 aa14.59□□□□□ -0.07
COL27A1-202ENST00000451716 CPA1P15085 419 aa14.59□□□□□ -0.07
COL27A1-202ENST00000451716 ZCRB1Q8TBF4 217 aaKnown RBP14.59□□□□□ -0.07
COL27A1-202ENST00000451716 DDX49Q9Y6V7 483 aaKnown RBP14.59□□□□□ -0.07
COL27A1-202ENST00000451716 RAD50Q92878 1312 aa14.59□□□□□ -0.07
COL27A1-202ENST00000451716 USP42Q9H9J4 1324 aaKnown RBP14.59□□□□□ -0.07
COL27A1-202ENST00000451716 CPDO75976 1380 aa14.59□□□□□ -0.07
COL27A1-202ENST00000451716 KIAA1211Q6ZU35 1233 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms