RNA–Protein interactions for RNA: ENST00000450288.3

PDXDC1-203, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5 BASIC

Gene PDXDC1, Length 4,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-203ENST00000450288 REREQ9P2R6 1566 aa9.9□□□□□ -0.82
PDXDC1-203ENST00000450288 SMARCC1Q92922 1105 aaPredicted RBP9.9□□□□□ -0.82
PDXDC1-203ENST00000450288 OVOS2A0A0J9YW53 1432 aa9.9□□□□□ -0.82
PDXDC1-203ENST00000450288 OVOS2Q6IE36 1432 aa9.9□□□□□ -0.82
PDXDC1-203ENST00000450288 REC8O95072 547 aa9.9□□□□□ -0.82
PDXDC1-203ENST00000450288 RRP12Q5JTH9 1297 aaKnown RBP9.9□□□□□ -0.82
PDXDC1-203ENST00000450288 RHPN1Q8TCX5 695 aa9.9□□□□□ -0.82
PDXDC1-203ENST00000450288 SLIT1O75093 1534 aa9.9□□□□□ -0.83
PDXDC1-203ENST00000450288 IRS4O14654 1257 aaPredicted RBP9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 TIMM10P62072 90 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 HSP90AB3PQ58FF7 597 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 MST1RQ04912 1400 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 AAMPQ13685 434 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 DDX46Q7L014 1031 aaKnown RBP9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 TRMT2AQ8IZ69 625 aaKnown RBP9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 ANKRD44Q8N8A2 993 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 SUCLG2Q96I99 432 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 SOS2Q07890 1332 aaPredicted RBP9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 ANKRD18BA2A2Z9 1011 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 ERVV-2B6SEH9 535 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 C6orf229H3BNL8 230 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 ERC1Q8IUD2 1116 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 PNPLA6Q8IY17 1366 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 ZNF853P0CG23 659 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 SYNE4Q8N205 404 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 RUFY2Q8WXA3 655 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 UPF3BQ9BZI7 483 aaKnown RBP9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 USP44Q9H0E7 712 aa9.89□□□□□ -0.83
PDXDC1-203ENST00000450288 LRRC7Q96NW7 1537 aa9.88□□□□□ -0.83
PDXDC1-203ENST00000450288 NEK4P51957 841 aa9.88□□□□□ -0.83
PDXDC1-203ENST00000450288 USP31Q70CQ4 1352 aa9.88□□□□□ -0.83
PDXDC1-203ENST00000450288 GOLIM4O00461 696 aa9.88□□□□□ -0.83
PDXDC1-203ENST00000450288 PPFIA3O75145 1194 aa9.88□□□□□ -0.83
PDXDC1-203ENST00000450288 CCDC87Q9NVE4 849 aa9.88□□□□□ -0.83
PDXDC1-203ENST00000450288 RPGRQ92834 1020 aaKnown RBP9.88□□□□□ -0.83
PDXDC1-203ENST00000450288 RAI14Q9P0K7 980 aa9.88□□□□□ -0.83
PDXDC1-203ENST00000450288 LRP2BPQ9P2M1 347 aa9.88□□□□□ -0.83
PDXDC1-203ENST00000450288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 IFIT1P09914 478 aaKnown RBP9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 ZKSCAN1P17029 563 aaPredicted RBP9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 ATP8B2P98198 1209 aa9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 TRAPPC3LQ5T215 181 aa9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 METTL22Q9BUU2 404 aaPredicted RBP9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 CDCA7Q9BWT1 371 aaPredicted RBP9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 KIAA1210Q9ULL0 1709 aa9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 RTL1A6NKG5 1358 aa9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 ST18O60284 1047 aa9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 TAF5LO75529 589 aa9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 CRKLP46109 303 aaKnown RBP9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 MAP2P11137 1827 aaKnown RBP9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 DTNBO60941 627 aa9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 PLBD2Q8NHP8 589 aa9.87□□□□□ -0.83
PDXDC1-203ENST00000450288 RXRBP28702 533 aa9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 RBM5P52756 815 aaKnown RBP eCLIP9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 GCKRQ14397 625 aa9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 FAM196AQ6ZSG2 479 aa9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 KRT27Q7Z3Y8 459 aa9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 SRP68Q9UHB9 627 aaKnown RBP9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 TFCP2Q12800 502 aa9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 STK3Q13188 491 aa9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 GNL2Q13823 731 aaKnown RBP9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 UTP14AQ9BVJ6 771 aaKnown RBP9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 ATG3Q9NT62 314 aa9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 NSFL1CQ9UNZ2 370 aaKnown RBP9.86□□□□□ -0.83
PDXDC1-203ENST00000450288 GOLGA6L22H0YM25 854 aa9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 SEC24BO95487 1268 aa9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 PLCB2Q00722 1185 aa9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 USPL1Q5W0Q7 1092 aa9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 ALDH1L1O75891 902 aa9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 MARCH10Q8NA82 808 aaPredicted RBP9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 NLRP3Q96P20 1036 aa9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 F8W031 263 aaPredicted RBP9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 EDC3Q96F86 508 aaKnown RBP9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 GJD4Q96KN9 370 aaPredicted RBP9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 NOL10Q9BSC4 688 aaKnown RBP9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.85□□□□□ -0.831e-7■■■□□ 14.6
PDXDC1-203ENST00000450288 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 NEURL1BA8MQ27 555 aa9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 NUCB1Q02818 461 aa9.85□□□□□ -0.83
PDXDC1-203ENST00000450288 SDSP20132 328 aa9.84□□□□□ -0.83
PDXDC1-203ENST00000450288 HLFQ16534 295 aa9.84□□□□□ -0.83
PDXDC1-203ENST00000450288 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
PDXDC1-203ENST00000450288 TCEANC2Q96MN5 208 aa9.84□□□□□ -0.83
PDXDC1-203ENST00000450288 PDE1AP54750 535 aa9.84□□□□□ -0.83
PDXDC1-203ENST00000450288 HDAC1Q13547 482 aaPredicted RBP9.84□□□□□ -0.83
PDXDC1-203ENST00000450288 TPTE2Q6XPS3 522 aa9.84□□□□□ -0.83
PDXDC1-203ENST00000450288 TBC1D9Q6ZT07 1266 aa9.84□□□□□ -0.83
PDXDC1-203ENST00000450288 ECHDC1Q9NTX5 307 aa9.84□□□□□ -0.83
PDXDC1-203ENST00000450288 EIF5BO60841 1220 aaKnown RBP9.83□□□□□ -0.84
PDXDC1-203ENST00000450288 GLRX3O76003 335 aaKnown RBP9.83□□□□□ -0.84
PDXDC1-203ENST00000450288 ITGA6P23229 1130 aa9.83□□□□□ -0.84
PDXDC1-203ENST00000450288 BEND3Q5T5X7 828 aa9.83□□□□□ -0.84
PDXDC1-203ENST00000450288 DCTPP1Q9H773 170 aa9.83□□□□□ -0.84
PDXDC1-203ENST00000450288 SNAP23O00161 211 aa9.83□□□□□ -0.84
PDXDC1-203ENST00000450288 HAND2P61296 217 aa9.83□□□□□ -0.84
PDXDC1-203ENST00000450288 MCTP1Q6DN14 999 aa9.83□□□□□ -0.84
PDXDC1-203ENST00000450288 JCADQ9P266 1359 aa9.83□□□□□ -0.84
PDXDC1-203ENST00000450288 NFXL1Q6ZNB6 911 aa9.83□□□□□ -0.84
PDXDC1-203ENST00000450288 TRDNQ13061 729 aa9.82□□□□□ -0.84
PDXDC1-203ENST00000450288 GOLGA6L4A6NEF3 574 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms