RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 ITGB4P16144 1822 aa26.67■■□□□ 1.86
NPAS1-202ENST00000449844 TNS2Q63HR2 1409 aa26.67■■□□□ 1.86
NPAS1-202ENST00000449844 RIC3Q7Z5B4 369 aa26.66■■□□□ 1.86
NPAS1-202ENST00000449844 HSP90AB4PQ58FF6 505 aa26.66■■□□□ 1.86
NPAS1-202ENST00000449844 SRGAP3O43295 1099 aa26.65■■□□□ 1.86
NPAS1-202ENST00000449844 SURF6O75683 361 aaKnown RBP26.65■■□□□ 1.86
NPAS1-202ENST00000449844 COPS6Q7L5N1 327 aa26.65■■□□□ 1.86
NPAS1-202ENST00000449844 HSP90AA1P07900 732 aaKnown RBP26.65■■□□□ 1.86
NPAS1-202ENST00000449844 MTX1Q13505 466 aa26.65■■□□□ 1.86
NPAS1-202ENST00000449844 LRP6O75581 1613 aa26.64■■□□□ 1.86
NPAS1-202ENST00000449844 ERBB4Q15303 1308 aa26.64■■□□□ 1.86
NPAS1-202ENST00000449844 EXOC5O00471 708 aa26.64■■□□□ 1.86
NPAS1-202ENST00000449844 LINS1Q8NG48 757 aa26.64■■□□□ 1.86
NPAS1-202ENST00000449844 KIF1BPQ96EK5 621 aa26.64■■□□□ 1.86
NPAS1-202ENST00000449844 PIP4K2AP48426 406 aaPredicted RBP26.63■■□□□ 1.85
NPAS1-202ENST00000449844 LRP10Q7Z4F1 713 aa26.63■■□□□ 1.85
NPAS1-202ENST00000449844 RHPN1Q8TCX5 695 aa26.63■■□□□ 1.85
NPAS1-202ENST00000449844 C9orf78Q9NZ63 289 aaPredicted RBP26.63■■□□□ 1.85
NPAS1-202ENST00000449844 PTCD1O75127 700 aaKnown RBP26.63■■□□□ 1.85
NPAS1-202ENST00000449844 CWF19L2Q2TBE0 894 aaKnown RBP26.63■■□□□ 1.85
NPAS1-202ENST00000449844 TSHZ3Q63HK5 1081 aa26.63■■□□□ 1.85
NPAS1-202ENST00000449844 SPATA31A1Q5TZJ5 1347 aa26.62■■□□□ 1.85
NPAS1-202ENST00000449844 CDCA7Q9BWT1 371 aaPredicted RBP26.62■■□□□ 1.85
NPAS1-202ENST00000449844 ARFGEF2Q9Y6D5 1785 aa26.62■■□□□ 1.85
NPAS1-202ENST00000449844 NEXNQ0ZGT2 675 aa26.61■■□□□ 1.85
NPAS1-202ENST00000449844 ESYT1Q9BSJ8 1104 aa26.61■■□□□ 1.85
NPAS1-202ENST00000449844 THRAP3Q9Y2W1 955 aaKnown RBP26.61■■□□□ 1.85
NPAS1-202ENST00000449844 RAB3GAP1Q15042 981 aa26.6■■□□□ 1.85
NPAS1-202ENST00000449844 IL1RAPL2Q9NP60 686 aa26.6■■□□□ 1.85
NPAS1-202ENST00000449844 DDX11L8A8MPP1 907 aa26.6■■□□□ 1.85
NPAS1-202ENST00000449844 CHMLP26374 656 aa26.6■■□□□ 1.85
NPAS1-202ENST00000449844 ANKRD13DQ6ZTN6 518 aa26.6■■□□□ 1.85
NPAS1-202ENST00000449844 SLIT2O94813 1529 aa26.59■■□□□ 1.85
NPAS1-202ENST00000449844 TRIM6-TRIM34B2RNG4 842 aa26.59■■□□□ 1.85
NPAS1-202ENST00000449844 KAT6BQ8WYB5 2073 aa26.59■■□□□ 1.85
NPAS1-202ENST00000449844 AFDNP55196 1824 aaKnown RBP26.59■■□□□ 1.85
NPAS1-202ENST00000449844 ST18O60284 1047 aa26.58■■□□□ 1.85
NPAS1-202ENST00000449844 PIGBQ92521 554 aa26.58■■□□□ 1.85
NPAS1-202ENST00000449844 RILPL2Q969X0 211 aa26.58■■□□□ 1.85
NPAS1-202ENST00000449844 METTL22Q9BUU2 404 aaPredicted RBP26.58■■□□□ 1.85
NPAS1-202ENST00000449844 GRM8O00222 908 aa26.57■■□□□ 1.84
NPAS1-202ENST00000449844 MYD88Q99836 296 aa26.57■■□□□ 1.84
NPAS1-202ENST00000449844 UTYO14607 1347 aa26.57■■□□□ 1.84
NPAS1-202ENST00000449844 EPB41L2O43491 1005 aaKnown RBP26.56■■□□□ 1.84
NPAS1-202ENST00000449844 IGKV5-2P06315 115 aa26.56■■□□□ 1.84
NPAS1-202ENST00000449844 DOT1LQ8TEK3 1739 aa26.56■■□□□ 1.84
NPAS1-202ENST00000449844 NBPF26B4DH59 902 aa26.56■■□□□ 1.84
NPAS1-202ENST00000449844 NBPF14Q5TI25 921 aa26.56■■□□□ 1.84
NPAS1-202ENST00000449844 NBPF10Q6P3W6 841 aaKnown RBP26.56■■□□□ 1.84
NPAS1-202ENST00000449844 NUTM1Q86Y26 1132 aa26.56■■□□□ 1.84
NPAS1-202ENST00000449844 NBPF15Q8N660 670 aa26.56■■□□□ 1.84
NPAS1-202ENST00000449844 TNPO1Q92973 898 aaKnown RBP26.56■■□□□ 1.84
NPAS1-202ENST00000449844 ASAP1Q9ULH1 1129 aa26.56■■□□□ 1.84
NPAS1-202ENST00000449844 SPATA31A5Q5VU36 1347 aa26.56■■□□□ 1.84
NPAS1-202ENST00000449844 SPATA31A7Q8IWB4 1347 aa26.56■■□□□ 1.84
NPAS1-202ENST00000449844 JCADQ9P266 1359 aa26.55■■□□□ 1.84
NPAS1-202ENST00000449844 MCCP23508 829 aa26.55■■□□□ 1.84
NPAS1-202ENST00000449844 GBP4Q96PP9 640 aa26.55■■□□□ 1.84
NPAS1-202ENST00000449844 CCDC9Q9Y3X0 531 aaKnown RBP26.55■■□□□ 1.84
NPAS1-202ENST00000449844 USP42Q9H9J4 1324 aaKnown RBP26.55■■□□□ 1.84
NPAS1-202ENST00000449844 NEURL1BA8MQ27 555 aa26.55■■□□□ 1.84
NPAS1-202ENST00000449844 BCL9O00512 1426 aa26.55■■□□□ 1.84
NPAS1-202ENST00000449844 DDB1Q16531 1140 aa26.54■■□□□ 1.84
NPAS1-202ENST00000449844 PLBD2Q8NHP8 589 aa26.54■■□□□ 1.84
NPAS1-202ENST00000449844 PI4K2BQ8TCG2 481 aa26.54■■□□□ 1.84
NPAS1-202ENST00000449844 ATG3Q9NT62 314 aa26.54■■□□□ 1.84
NPAS1-202ENST00000449844 A1BGP04217 495 aa26.53■■□□□ 1.84
NPAS1-202ENST00000449844 NUP188Q5SRE5 1749 aa26.53■■□□□ 1.84
NPAS1-202ENST00000449844 ERC1Q8IUD2 1116 aa26.53■■□□□ 1.84
NPAS1-202ENST00000449844 PTMSP20962 102 aa26.52■■□□□ 1.84
NPAS1-202ENST00000449844 ANAPC15P60006 121 aa26.52■■□□□ 1.84
NPAS1-202ENST00000449844 UNC5CLQ8IV45 518 aa26.52■■□□□ 1.84
NPAS1-202ENST00000449844 VSIG10Q8N0Z9 540 aa26.52■■□□□ 1.84
NPAS1-202ENST00000449844 FOXD4L1Q9NU39 408 aa26.52■■□□□ 1.84
NPAS1-202ENST00000449844 TTC41PQ6P2S7 1318 aa26.52■■□□□ 1.84
NPAS1-202ENST00000449844 OS9Q13438 667 aaPredicted RBP26.51■■□□□ 1.83
NPAS1-202ENST00000449844 GCKRQ14397 625 aa26.51■■□□□ 1.83
NPAS1-202ENST00000449844 SYTL4Q96C24 671 aaPredicted RBP26.51■■□□□ 1.83
NPAS1-202ENST00000449844 IL17RAQ96F46 866 aa26.51■■□□□ 1.83
NPAS1-202ENST00000449844 SUCLG2Q96I99 432 aa26.51■■□□□ 1.83
NPAS1-202ENST00000449844 TEX13AQ9BXU3 409 aaPredicted RBP26.51■■□□□ 1.83
NPAS1-202ENST00000449844 TRAK2O60296 914 aa26.5■■□□□ 1.83
NPAS1-202ENST00000449844 BARGINQ6ZT62 677 aa26.49■■□□□ 1.83
NPAS1-202ENST00000449844 CNTROBQ8N137 903 aa26.49■■□□□ 1.83
NPAS1-202ENST00000449844 CLASRPQ8N2M8 674 aaKnown RBP26.49■■□□□ 1.83
NPAS1-202ENST00000449844 CWC22Q9HCG8 908 aaKnown RBP26.49■■□□□ 1.83
NPAS1-202ENST00000449844 CLEC17AQ6ZS10 378 aa26.48■■□□□ 1.83
NPAS1-202ENST00000449844 IL27Q8NEV9 243 aa26.48■■□□□ 1.83
NPAS1-202ENST00000449844 C8orf37Q96NL8 207 aa26.48■■□□□ 1.83
NPAS1-202ENST00000449844 ANO2Q9NQ90 1003 aa26.48■■□□□ 1.83
NPAS1-202ENST00000449844 TTLL7Q6ZT98 887 aa26.48■■□□□ 1.83
NPAS1-202ENST00000449844 DNAJC10Q8IXB1 793 aa26.48■■□□□ 1.83
NPAS1-202ENST00000449844 MCM2P49736 904 aa26.47■■□□□ 1.83
NPAS1-202ENST00000449844 GLRX3O76003 335 aaKnown RBP26.46■■□□□ 1.83
NPAS1-202ENST00000449844 AEBP2Q6ZN18 517 aaPredicted RBP26.46■■□□□ 1.83
NPAS1-202ENST00000449844 BICC1Q9H694 974 aaKnown RBP26.46■■□□□ 1.83
NPAS1-202ENST00000449844 PRIM1P49642 420 aaKnown RBP26.46■■□□□ 1.83
NPAS1-202ENST00000449844 NUCB2P80303 420 aa26.46■■□□□ 1.83
NPAS1-202ENST00000449844 KAZALD1Q96I82 304 aa26.46■■□□□ 1.83
NPAS1-202ENST00000449844 NGLY1Q96IV0 654 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms