RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 MBD3O95983 291 aa16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 CYP2E1P05181 493 aaPredicted RBP16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 C19orf44Q9H6X5 657 aa16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 BABAM1Q9NWV8 329 aa16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 PTPRCP08575 1304 aa16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 STRCQ7RTU9 1775 aa16.16■□□□□ 0.18
SYNGAP1-204ENST00000449372 TRERF1Q96PN7 1200 aa16.15■□□□□ 0.18
SYNGAP1-204ENST00000449372 RPAP2Q8IXW5 612 aaPredicted RBP16.15■□□□□ 0.18
SYNGAP1-204ENST00000449372 TBC1D9Q6ZT07 1266 aa16.14■□□□□ 0.18
SYNGAP1-204ENST00000449372 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.14■□□□□ 0.17
SYNGAP1-204ENST00000449372 GCP02774 474 aa16.14■□□□□ 0.17
SYNGAP1-204ENST00000449372 NCBP1Q09161 790 aaKnown RBP16.14■□□□□ 0.17
SYNGAP1-204ENST00000449372 PROSER2Q86WR7 435 aaPredicted RBP16.14■□□□□ 0.17
SYNGAP1-204ENST00000449372 RTF1Q92541 710 aaKnown RBP16.14■□□□□ 0.17
SYNGAP1-204ENST00000449372 MORC2Q9Y6X9 1032 aaPredicted RBP16.13■□□□□ 0.17
SYNGAP1-204ENST00000449372 APPP05067 770 aa16.13■□□□□ 0.17
SYNGAP1-204ENST00000449372 TSPYL4Q9UJ04 414 aa16.13■□□□□ 0.17
SYNGAP1-204ENST00000449372 USHBP1Q8N6Y0 703 aa16.13■□□□□ 0.17
SYNGAP1-204ENST00000449372 USP25Q9UHP3 1055 aa16.13■□□□□ 0.17
SYNGAP1-204ENST00000449372 TMEM94Q12767 1356 aa16.12■□□□□ 0.17
SYNGAP1-204ENST00000449372 SOS1Q07889 1333 aaPredicted RBP16.12■□□□□ 0.17
SYNGAP1-204ENST00000449372 TNNT3P45378 269 aaPredicted RBP16.12■□□□□ 0.17
SYNGAP1-204ENST00000449372 C1orf115Q9H7X2 142 aa16.12■□□□□ 0.17
SYNGAP1-204ENST00000449372 PXDNQ92626 1479 aa16.11■□□□□ 0.17
SYNGAP1-204ENST00000449372 ADCY5O95622 1261 aa16.11■□□□□ 0.17
SYNGAP1-204ENST00000449372 KRT222Q8N1A0 295 aa16.11■□□□□ 0.17
SYNGAP1-204ENST00000449372 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
SYNGAP1-204ENST00000449372 CHAMP1Q96JM3 812 aa16.11■□□□□ 0.17
SYNGAP1-204ENST00000449372 ABCC6O95255 1503 aa16.11■□□□□ 0.17
SYNGAP1-204ENST00000449372 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
SYNGAP1-204ENST00000449372 C14orf37Q86TY3 774 aa16.11■□□□□ 0.17
SYNGAP1-204ENST00000449372 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
SYNGAP1-204ENST00000449372 OVOS2A0A0G2JMS6 1433 aa16.1■□□□□ 0.17
SYNGAP1-204ENST00000449372 CHMP4CQ96CF2 233 aa16.1■□□□□ 0.17
SYNGAP1-204ENST00000449372 G2E3Q7L622 706 aa16.1■□□□□ 0.17
SYNGAP1-204ENST00000449372 AXIN2Q9Y2T1 843 aa16.1■□□□□ 0.17
SYNGAP1-204ENST00000449372 FEZ2Q9UHY8 353 aaPredicted RBP16.1■□□□□ 0.17
SYNGAP1-204ENST00000449372 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
SYNGAP1-204ENST00000449372 KIF18AQ8NI77 898 aa16.09■□□□□ 0.17
SYNGAP1-204ENST00000449372 KIAA1524Q8TCG1 905 aa16.09■□□□□ 0.17
SYNGAP1-204ENST00000449372 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
SYNGAP1-204ENST00000449372 UVSSAQ2YD98 709 aa16.09■□□□□ 0.17
SYNGAP1-204ENST00000449372 LRRC59Q96AG4 307 aaKnown RBP16.08■□□□□ 0.17
SYNGAP1-204ENST00000449372 HDAC5Q9UQL6 1122 aa16.08■□□□□ 0.16
SYNGAP1-204ENST00000449372 SYCP1Q15431 976 aa16.08■□□□□ 0.16
SYNGAP1-204ENST00000449372 FAM184AQ8NB25 1140 aa16.08■□□□□ 0.16
SYNGAP1-204ENST00000449372 YY1AP1Q9H869 796 aa16.07■□□□□ 0.16
SYNGAP1-204ENST00000449372 PXDNLA1KZ92 1463 aa16.07■□□□□ 0.16
SYNGAP1-204ENST00000449372 TTC22Q5TAA0 569 aa16.07■□□□□ 0.16
SYNGAP1-204ENST00000449372 EFCC1Q9HA90 598 aa16.07■□□□□ 0.16
SYNGAP1-204ENST00000449372 FOXD4L5Q5VV16 416 aaPredicted RBP16.07■□□□□ 0.16
SYNGAP1-204ENST00000449372 FOXD4L4Q8WXT5 416 aaPredicted RBP16.07■□□□□ 0.16
SYNGAP1-204ENST00000449372 DCTPP1Q9H773 170 aa16.07■□□□□ 0.16
SYNGAP1-204ENST00000449372 MMP14P50281 582 aa16.06■□□□□ 0.16
SYNGAP1-204ENST00000449372 ANKRD44Q8N8A2 993 aa16.06■□□□□ 0.16
SYNGAP1-204ENST00000449372 GEMIN8Q9NWZ8 242 aaKnown RBP16.06■□□□□ 0.16
SYNGAP1-204ENST00000449372 ZDHHC9Q9Y397 364 aa16.06■□□□□ 0.16
SYNGAP1-204ENST00000449372 SCN11AQ9UI33 1791 aa16.06■□□□□ 0.16
SYNGAP1-204ENST00000449372 ERC2O15083 957 aa16.06■□□□□ 0.16
SYNGAP1-204ENST00000449372 ZGPATQ8N5A5 531 aaKnown RBP16.06■□□□□ 0.16
SYNGAP1-204ENST00000449372 LGR6Q9HBX8 967 aa16.06■□□□□ 0.16
SYNGAP1-204ENST00000449372 BCCIPQ9P287 314 aaKnown RBP eCLIP16.06■□□□□ 0.16
SYNGAP1-204ENST00000449372 PYCARDQ9ULZ3 195 aa16.06■□□□□ 0.16
SYNGAP1-204ENST00000449372 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
SYNGAP1-204ENST00000449372 PLCB2Q00722 1185 aa16.05■□□□□ 0.16
SYNGAP1-204ENST00000449372 CEP85Q6P2H3 762 aa16.05■□□□□ 0.16
SYNGAP1-204ENST00000449372 SAMD1Q6SPF0 538 aaPredicted RBP16.05■□□□□ 0.16
SYNGAP1-204ENST00000449372 HEG1Q9ULI3 1381 aa16.05■□□□□ 0.16
SYNGAP1-204ENST00000449372 AKAP4Q5JQC9 854 aa16.04■□□□□ 0.16
SYNGAP1-204ENST00000449372 ANKRD24Q8TF21 1146 aa16.04■□□□□ 0.16
SYNGAP1-204ENST00000449372 PKD1L3Q7Z443 1732 aa16.04■□□□□ 0.16
SYNGAP1-204ENST00000449372 HNRNPH2P55795 449 aaKnown RBP16.04■□□□□ 0.16
SYNGAP1-204ENST00000449372 MEIS3Q99687 375 aa16.04■□□□□ 0.16
SYNGAP1-204ENST00000449372 NAA30Q147X3 362 aaPredicted RBP16.04■□□□□ 0.16
SYNGAP1-204ENST00000449372 ERBB3P21860 1342 aa16.04■□□□□ 0.16
SYNGAP1-204ENST00000449372 TNS3Q68CZ2 1445 aa16.03■□□□□ 0.16
SYNGAP1-204ENST00000449372 EIF4A1P60842 406 aaKnown RBP16.03■□□□□ 0.16
SYNGAP1-204ENST00000449372 CCDC30Q5VVM6 783 aa16.02■□□□□ 0.16
SYNGAP1-204ENST00000449372 FAM193AP78312 1265 aa16.02■□□□□ 0.16
SYNGAP1-204ENST00000449372 RSPH14Q9UHP6 348 aa16.02■□□□□ 0.16
SYNGAP1-204ENST00000449372 CLGNO14967 610 aa16.02■□□□□ 0.15
SYNGAP1-204ENST00000449372 RAD51AP2Q09MP3 1159 aa16.02■□□□□ 0.15
SYNGAP1-204ENST00000449372 AMOTQ4VCS5 1084 aa16.02■□□□□ 0.15
SYNGAP1-204ENST00000449372 CNPY4Q8N129 248 aa16.02■□□□□ 0.15
SYNGAP1-204ENST00000449372 PLEKHG2Q9H7P9 1386 aa16.02■□□□□ 0.15
SYNGAP1-204ENST00000449372 FLIIQ13045 1269 aa16.01■□□□□ 0.15
SYNGAP1-204ENST00000449372 PLEKHM2Q8IWE5 1019 aa16.01■□□□□ 0.15
SYNGAP1-204ENST00000449372 F6X3S4 739 aa16.01■□□□□ 0.15
SYNGAP1-204ENST00000449372 PSEN1P49768 467 aa16.01■□□□□ 0.15
SYNGAP1-204ENST00000449372 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-204ENST00000449372 KCNF1Q9H3M0 494 aa16.01■□□□□ 0.15
SYNGAP1-204ENST00000449372 ABCA3Q99758 1704 aa16.01■□□□□ 0.15
SYNGAP1-204ENST00000449372 HOXB7P09629 217 aa16.01■□□□□ 0.15
SYNGAP1-204ENST00000449372 CCT4P50991 539 aaKnown RBP16.01■□□□□ 0.15
SYNGAP1-204ENST00000449372 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
SYNGAP1-204ENST00000449372 SMTNL1A8MU46 457 aa16■□□□□ 0.15
SYNGAP1-204ENST00000449372 ATF3P18847 181 aa16■□□□□ 0.15
SYNGAP1-204ENST00000449372 CREBRFQ8IUR6 639 aa16■□□□□ 0.15
SYNGAP1-204ENST00000449372 USP26Q9BXU7 913 aa16■□□□□ 0.15
SYNGAP1-204ENST00000449372 LOC102724159A0A0B4J2E5 919 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms