RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 SCN7AQ01118 1682 aa18.38■□□□□ 0.53
RTFDC1-204ENST00000449062 MYL6BP14649 208 aa18.38■□□□□ 0.53
RTFDC1-204ENST00000449062 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
RTFDC1-204ENST00000449062 DALRD3Q5D0E6 543 aaKnown RBP18.38■□□□□ 0.53
RTFDC1-204ENST00000449062 CCDC24Q8N4L8 307 aa18.38■□□□□ 0.53
RTFDC1-204ENST00000449062 ZNF652Q9Y2D9 606 aa18.38■□□□□ 0.53
RTFDC1-204ENST00000449062 MAP3K15Q6ZN16 1313 aa18.38■□□□□ 0.53
RTFDC1-204ENST00000449062 KLRG2A4D1S0 409 aaPredicted RBP18.37■□□□□ 0.53
RTFDC1-204ENST00000449062 CCDC27Q2M243 656 aa18.37■□□□□ 0.53
RTFDC1-204ENST00000449062 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
RTFDC1-204ENST00000449062 ANXA1P04083 346 aa18.36■□□□□ 0.53
RTFDC1-204ENST00000449062 HOXB7P09629 217 aa18.36■□□□□ 0.53
RTFDC1-204ENST00000449062 C2CD5Q86YS7 1000 aa18.36■□□□□ 0.53
RTFDC1-204ENST00000449062 NIP7Q9Y221 180 aaKnown RBP eCLIP18.36■□□□□ 0.53
RTFDC1-204ENST00000449062 BRCA1P38398 1863 aaKnown RBP18.35■□□□□ 0.53
RTFDC1-204ENST00000449062 H0YIN7 160 aa18.35■□□□□ 0.53
RTFDC1-204ENST00000449062 GNAI1P63096 354 aa18.35■□□□□ 0.53
RTFDC1-204ENST00000449062 ZNF34Q8IZ26 560 aa18.35■□□□□ 0.53
RTFDC1-204ENST00000449062 CNBD1Q8NA66 436 aa18.35■□□□□ 0.53
RTFDC1-204ENST00000449062 DDX21Q9NR30 783 aaKnown RBP eCLIP18.35■□□□□ 0.53
RTFDC1-204ENST00000449062 PDZRN3Q9UPQ7 1066 aa18.35■□□□□ 0.53
RTFDC1-204ENST00000449062 LAMB4A4D0S4 1761 aa18.35■□□□□ 0.53
RTFDC1-204ENST00000449062 PDE6BP35913 854 aa18.34■□□□□ 0.53
RTFDC1-204ENST00000449062 CALD1Q05682 793 aaKnown RBP18.34■□□□□ 0.53
RTFDC1-204ENST00000449062 DUSP27Q5VZP5 1158 aa18.34■□□□□ 0.53
RTFDC1-204ENST00000449062 TPTE2Q6XPS3 522 aa18.34■□□□□ 0.53
RTFDC1-204ENST00000449062 GIGYF2Q6Y7W6 1299 aaKnown RBP18.34■□□□□ 0.53
RTFDC1-204ENST00000449062 ARHGAP27Q6ZUM4 889 aa18.34■□□□□ 0.53
RTFDC1-204ENST00000449062 NBPF5PQ86XG9 351 aaPredicted RBP18.34■□□□□ 0.53
RTFDC1-204ENST00000449062 WWC1Q8IX03 1113 aa18.34■□□□□ 0.53
RTFDC1-204ENST00000449062 BCORQ6W2J9 1755 aa18.34■□□□□ 0.53
RTFDC1-204ENST00000449062 ADCY9O60503 1353 aa18.33■□□□□ 0.53
RTFDC1-204ENST00000449062 TTLL6Q8N841 843 aa18.33■□□□□ 0.52
RTFDC1-204ENST00000449062 NECTIN2Q92692 538 aa18.33■□□□□ 0.52
RTFDC1-204ENST00000449062 ZBTB3Q9H5J0 574 aa18.33■□□□□ 0.52
RTFDC1-204ENST00000449062 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
RTFDC1-204ENST00000449062 SRGNP10124 158 aa18.32■□□□□ 0.52
RTFDC1-204ENST00000449062 KIF6Q6ZMV9 814 aa18.32■□□□□ 0.52
RTFDC1-204ENST00000449062 COPS6Q7L5N1 327 aa18.32■□□□□ 0.52
RTFDC1-204ENST00000449062 C8orf58Q8NAV2 365 aa18.32■□□□□ 0.52
RTFDC1-204ENST00000449062 ATP10DQ9P241 1426 aa18.32■□□□□ 0.52
RTFDC1-204ENST00000449062 UBN2Q6ZU65 1347 aa18.31■□□□□ 0.52
RTFDC1-204ENST00000449062 XAGE3Q8WTP9 111 aa18.31■□□□□ 0.52
RTFDC1-204ENST00000449062 CHPF2Q9P2E5 772 aa18.31■□□□□ 0.52
RTFDC1-204ENST00000449062 ANKRD31Q8N7Z5 1873 aa18.31■□□□□ 0.52
RTFDC1-204ENST00000449062 ST5P78524 1137 aa18.3■□□□□ 0.52
RTFDC1-204ENST00000449062 HDGFL1Q5TGJ6 251 aa18.3■□□□□ 0.52
RTFDC1-204ENST00000449062 SUSD4Q5VX71 490 aa18.3■□□□□ 0.52
RTFDC1-204ENST00000449062 STYK1Q6J9G0 422 aa18.29■□□□□ 0.52
RTFDC1-204ENST00000449062 C7orf43Q8WVR3 580 aa18.29■□□□□ 0.52
RTFDC1-204ENST00000449062 DBF4Q9UBU7 674 aaPredicted RBP18.29■□□□□ 0.52
RTFDC1-204ENST00000449062 IL16Q14005 1332 aa18.28■□□□□ 0.52
RTFDC1-204ENST00000449062 FAM177BA6PVY3 158 aa18.28■□□□□ 0.52
RTFDC1-204ENST00000449062 ELL2O00472 640 aaPredicted RBP18.28■□□□□ 0.52
RTFDC1-204ENST00000449062 GPTP24298 496 aa18.28■□□□□ 0.52
RTFDC1-204ENST00000449062 PRELPP51888 382 aa18.28■□□□□ 0.52
RTFDC1-204ENST00000449062 ZNF622Q969S3 477 aaKnown RBP eCLIP18.28■□□□□ 0.527e-9■□□□□ 9.4
RTFDC1-204ENST00000449062 MASTLQ96GX5 879 aa18.28■□□□□ 0.52
RTFDC1-204ENST00000449062 ARFGEF1Q9Y6D6 1849 aa18.28■□□□□ 0.52
RTFDC1-204ENST00000449062 AIMP1Q12904 312 aaKnown RBP18.27■□□□□ 0.52
RTFDC1-204ENST00000449062 TSPYL6Q8N831 410 aa18.27■□□□□ 0.52
RTFDC1-204ENST00000449062 NUP98P52948 1817 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 NTSR2O95665 410 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 TCIRG1Q13488 830 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 CRY2Q49AN0 593 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 ERFEQ4G0M1 354 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 SLC10A5Q5PT55 438 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 C9orf131Q5VYM1 1079 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 NUTM1Q86Y26 1132 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 CNKSR1Q969H4 720 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 NYXQ9GZU5 481 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 IBTKQ9P2D0 1353 aaPredicted RBP18.26■□□□□ 0.51
RTFDC1-204ENST00000449062 NFKBIEO00221 500 aa18.25■□□□□ 0.51
RTFDC1-204ENST00000449062 NPHP1O15259 732 aa18.25■□□□□ 0.51
RTFDC1-204ENST00000449062 NPR1P16066 1061 aa18.25■□□□□ 0.51
RTFDC1-204ENST00000449062 PARP10Q53GL7 1025 aa18.25■□□□□ 0.51
RTFDC1-204ENST00000449062 ANKRD13DQ6ZTN6 518 aa18.25■□□□□ 0.51
RTFDC1-204ENST00000449062 WDR63Q8IWG1 891 aa18.25■□□□□ 0.51
RTFDC1-204ENST00000449062 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
RTFDC1-204ENST00000449062 PLBD2Q8NHP8 589 aa18.25■□□□□ 0.51
RTFDC1-204ENST00000449062 TSR2Q969E8 191 aaKnown RBP18.25■□□□□ 0.51
RTFDC1-204ENST00000449062 NLRP10Q86W26 655 aa18.24■□□□□ 0.51
RTFDC1-204ENST00000449062 ABCC12Q96J65 1359 aa18.24■□□□□ 0.51
RTFDC1-204ENST00000449062 DLEC1Q9Y238 1755 aa18.24■□□□□ 0.51
RTFDC1-204ENST00000449062 C21orf2O43822 256 aa18.23■□□□□ 0.51
RTFDC1-204ENST00000449062 GTF2E1P29083 439 aaPredicted RBP18.23■□□□□ 0.51
RTFDC1-204ENST00000449062 HOXA10P31260 410 aaPredicted RBP18.23■□□□□ 0.51
RTFDC1-204ENST00000449062 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
RTFDC1-204ENST00000449062 PHAXQ9H814 394 aaKnown RBP18.23■□□□□ 0.51
RTFDC1-204ENST00000449062 RASSF7Q02833 373 aa18.22■□□□□ 0.51
RTFDC1-204ENST00000449062 TRIM28Q13263 835 aaKnown RBP18.22■□□□□ 0.51
RTFDC1-204ENST00000449062 HSP90AB3PQ58FF7 597 aa18.22■□□□□ 0.51
RTFDC1-204ENST00000449062 C3orf67Q6ZVT6 689 aa18.22■□□□□ 0.51
RTFDC1-204ENST00000449062 PPP1R42Q7Z4L9 355 aa18.22■□□□□ 0.51
RTFDC1-204ENST00000449062 ISCA1Q9BUE6 129 aa18.22■□□□□ 0.51
RTFDC1-204ENST00000449062 SPINK5Q9NQ38 1064 aaPredicted RBP18.22■□□□□ 0.51
RTFDC1-204ENST00000449062 RIC1Q4ADV7 1423 aa18.22■□□□□ 0.51
RTFDC1-204ENST00000449062 COL11A2P13942 1736 aaPredicted RBP18.21■□□□□ 0.51
RTFDC1-204ENST00000449062 SYNE4Q8N205 404 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms