RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 ZNF622Q969S3 477 aaKnown RBP eCLIP25.86■■□□□ 1.73
VCP-203ENST00000448530 RGL2O15211 777 aa25.85■■□□□ 1.73
VCP-203ENST00000448530 NEUROD2Q15784 382 aa25.85■■□□□ 1.73
VCP-203ENST00000448530 NGEFQ8N5V2 710 aa25.85■■□□□ 1.73
VCP-203ENST00000448530 RUNDC1Q96C34 613 aa25.85■■□□□ 1.73
VCP-203ENST00000448530 RRP7AQ9Y3A4 280 aaKnown RBP25.85■■□□□ 1.73
VCP-203ENST00000448530 RNF181Q9P0P0 153 aa25.84■■□□□ 1.73
VCP-203ENST00000448530 BABAM1Q9NWV8 329 aa25.83■■□□□ 1.73
VCP-203ENST00000448530 NIP7Q9Y221 180 aaKnown RBP eCLIP25.83■■□□□ 1.73
VCP-203ENST00000448530 KIF6Q6ZMV9 814 aa25.82■■□□□ 1.72
VCP-203ENST00000448530 MYL6BP14649 208 aa25.81■■□□□ 1.72
VCP-203ENST00000448530 TPTE2Q6XPS3 522 aa25.81■■□□□ 1.72
VCP-203ENST00000448530 ADAMTS8Q9UP79 889 aa25.81■■□□□ 1.72
VCP-203ENST00000448530 SBF1O95248 1867 aa25.81■■□□□ 1.72
VCP-203ENST00000448530 COL11A2P13942 1736 aaPredicted RBP25.8■■□□□ 1.72
VCP-203ENST00000448530 ERBB4Q15303 1308 aa25.79■■□□□ 1.72
VCP-203ENST00000448530 FAM177BA6PVY3 158 aa25.78■■□□□ 1.72
VCP-203ENST00000448530 ERVV-1B6SEH8 477 aa25.78■■□□□ 1.72
VCP-203ENST00000448530 GTF2E1P29083 439 aaPredicted RBP25.78■■□□□ 1.72
VCP-203ENST00000448530 RASSF7Q02833 373 aa25.78■■□□□ 1.72
VCP-203ENST00000448530 HLFQ16534 295 aa25.78■■□□□ 1.72
VCP-203ENST00000448530 CNKSR1Q969H4 720 aa25.78■■□□□ 1.72
VCP-203ENST00000448530 STYK1Q6J9G0 422 aa25.77■■□□□ 1.72
VCP-203ENST00000448530 LAS1LQ9Y4W2 734 aaKnown RBP25.77■■□□□ 1.72
VCP-203ENST00000448530 MAP3K15Q6ZN16 1313 aa25.77■■□□□ 1.72
VCP-203ENST00000448530 SRGNP10124 158 aa25.76■■□□□ 1.71
VCP-203ENST00000448530 EIF2S2P20042 333 aaKnown RBP25.76■■□□□ 1.71
VCP-203ENST00000448530 LMNB1P20700 586 aa25.76■■□□□ 1.71
VCP-203ENST00000448530 MASTLQ96GX5 879 aa25.76■■□□□ 1.71
VCP-203ENST00000448530 ZNF219Q9P2Y4 722 aaPredicted RBP25.76■■□□□ 1.71
VCP-203ENST00000448530 KDM2BQ8NHM5 1336 aa25.76■■□□□ 1.71
VCP-203ENST00000448530 NUP98P52948 1817 aa25.76■■□□□ 1.71
VCP-203ENST00000448530 CACNA1SQ13698 1873 aa25.75■■□□□ 1.71
VCP-203ENST00000448530 KIF3CO14782 793 aa25.75■■□□□ 1.71
VCP-203ENST00000448530 C21orf2O43822 256 aa25.75■■□□□ 1.71
VCP-203ENST00000448530 TTLL7Q6ZT98 887 aa25.75■■□□□ 1.71
VCP-203ENST00000448530 NYXQ9GZU5 481 aa25.74■■□□□ 1.71
VCP-203ENST00000448530 ZBTB3Q9H5J0 574 aa25.74■■□□□ 1.71
VCP-203ENST00000448530 TRIM35Q9UPQ4 493 aa25.73■■□□□ 1.71
VCP-203ENST00000448530 CCDC88AQ3V6T2 1871 aa25.72■■□□□ 1.71
VCP-203ENST00000448530 ZC3H4Q9UPT8 1303 aaKnown RBP25.72■■□□□ 1.71
VCP-203ENST00000448530 PRPF40BQ6NWY9 871 aaKnown RBP25.72■■□□□ 1.71
VCP-203ENST00000448530 NMRK2Q9NPI5 230 aa25.72■■□□□ 1.71
VCP-203ENST00000448530 CHL1O00533 1208 aa25.71■■□□□ 1.71
VCP-203ENST00000448530 NPR1P16066 1061 aa25.71■■□□□ 1.71
VCP-203ENST00000448530 SOGA3Q5TF21 947 aa25.71■■□□□ 1.71
VCP-203ENST00000448530 SLX4Q8IY92 1834 aa25.7■■□□□ 1.71
VCP-203ENST00000448530 ARFGEF2Q9Y6D5 1785 aa25.7■■□□□ 1.7
VCP-203ENST00000448530 NFKBIEO00221 500 aa25.7■■□□□ 1.7
VCP-203ENST00000448530 C16orf71Q8IYS4 520 aaPredicted RBP25.7■■□□□ 1.7
VCP-203ENST00000448530 GPTP24298 496 aa25.69■■□□□ 1.7
VCP-203ENST00000448530 NECTIN2Q92692 538 aa25.69■■□□□ 1.7
VCP-203ENST00000448530 FER1L6Q2WGJ9 1857 aa25.68■■□□□ 1.7
VCP-203ENST00000448530 TOMM70O94826 608 aa25.68■■□□□ 1.7
VCP-203ENST00000448530 GIGYF2Q6Y7W6 1299 aaKnown RBP25.68■■□□□ 1.7
VCP-203ENST00000448530 KLRG2A4D1S0 409 aaPredicted RBP25.67■■□□□ 1.7
VCP-203ENST00000448530 TIAM2Q8IVF5 1701 aa25.67■■□□□ 1.7
VCP-203ENST00000448530 TAOK3Q9H2K8 898 aa25.67■■□□□ 1.7
VCP-203ENST00000448530 APAF1O14727 1248 aa25.66■■□□□ 1.7
VCP-203ENST00000448530 PDIA6Q15084 440 aa25.66■■□□□ 1.7
VCP-203ENST00000448530 TNRC6CQ9HCJ0 1690 aaKnown RBP25.66■■□□□ 1.7
VCP-203ENST00000448530 ANXA1P04083 346 aa25.65■■□□□ 1.7
VCP-203ENST00000448530 HSPA6P17066 643 aa25.65■■□□□ 1.7
VCP-203ENST00000448530 PRELPP51888 382 aa25.65■■□□□ 1.7
VCP-203ENST00000448530 CALD1Q05682 793 aaKnown RBP25.65■■□□□ 1.7
VCP-203ENST00000448530 PROSER3Q2NL68 480 aa25.65■■□□□ 1.7
VCP-203ENST00000448530 NUTM1Q86Y26 1132 aa25.65■■□□□ 1.7
VCP-203ENST00000448530 CFAP44Q96MT7 982 aa25.65■■□□□ 1.7
VCP-203ENST00000448530 IBTKQ9P2D0 1353 aaPredicted RBP25.65■■□□□ 1.7
VCP-203ENST00000448530 ALDH1B1P30837 517 aa25.64■■□□□ 1.7
VCP-203ENST00000448530 KRT24Q2M2I5 525 aa25.64■■□□□ 1.7
VCP-203ENST00000448530 ERFEQ4G0M1 354 aa25.64■■□□□ 1.7
VCP-203ENST00000448530 PARP10Q53GL7 1025 aa25.64■■□□□ 1.7
VCP-203ENST00000448530 PPP1R42Q7Z4L9 355 aa25.64■■□□□ 1.7
VCP-203ENST00000448530 ZNF34Q8IZ26 560 aa25.64■■□□□ 1.7
VCP-203ENST00000448530 RRAGCQ9HB90 399 aa25.64■■□□□ 1.7
VCP-203ENST00000448530 UBN2Q6ZU65 1347 aa25.63■■□□□ 1.69
VCP-203ENST00000448530 LTBP3Q9NS15 1303 aa25.63■■□□□ 1.69
VCP-203ENST00000448530 AIMP1Q12904 312 aaKnown RBP25.63■■□□□ 1.69
VCP-203ENST00000448530 CCDC93Q567U6 631 aa25.63■■□□□ 1.69
VCP-203ENST00000448530 SUSD4Q5VX71 490 aa25.63■■□□□ 1.69
VCP-203ENST00000448530 LRP10Q7Z4F1 713 aa25.63■■□□□ 1.69
VCP-203ENST00000448530 DDX21Q9NR30 783 aaKnown RBP eCLIP25.63■■□□□ 1.69
VCP-203ENST00000448530 DICER1Q9UPY3 1922 aaKnown RBP25.63■■□□□ 1.69
VCP-203ENST00000448530 ABCC12Q96J65 1359 aa25.62■■□□□ 1.69
VCP-203ENST00000448530 ZNF316A6NFI3 1004 aaPredicted RBP25.62■■□□□ 1.69
VCP-203ENST00000448530 GLTPD2A6NH11 291 aa25.62■■□□□ 1.69
VCP-203ENST00000448530 HOXB7P09629 217 aa25.62■■□□□ 1.69
VCP-203ENST00000448530 HDGFL1Q5TGJ6 251 aa25.62■■□□□ 1.69
VCP-203ENST00000448530 COPS6Q7L5N1 327 aa25.62■■□□□ 1.69
VCP-203ENST00000448530 HSP90AB3PQ58FF7 597 aa25.61■■□□□ 1.69
VCP-203ENST00000448530 DPY19L2Q6NUT2 758 aa25.61■■□□□ 1.69
VCP-203ENST00000448530 XAGE3Q8WTP9 111 aa25.61■■□□□ 1.69
VCP-203ENST00000448530 RPGRQ92834 1020 aaKnown RBP25.61■■□□□ 1.69
VCP-203ENST00000448530 RBM46Q8TBY0 533 aaKnown RBP25.6■■□□□ 1.69
VCP-203ENST00000448530 GNAI1P63096 354 aa25.59■■□□□ 1.69
VCP-203ENST00000448530 CRY2Q49AN0 593 aa25.59■■□□□ 1.69
VCP-203ENST00000448530 C7orf43Q8WVR3 580 aa25.59■■□□□ 1.69
VCP-203ENST00000448530 MBIPQ9NS73 344 aa25.59■■□□□ 1.69
VCP-203ENST00000448530 CHPF2Q9P2E5 772 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms