RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.86
AC004540.1-206ENST00000448056 PDIA6Q15084 440 aa9.71□□□□□ -0.86
AC004540.1-206ENST00000448056 NBPF14Q5TI25 921 aa9.71□□□□□ -0.86
AC004540.1-206ENST00000448056 CCDC30Q5VVM6 783 aa9.71□□□□□ -0.86
AC004540.1-206ENST00000448056 NBPF10Q6P3W6 841 aaKnown RBP9.71□□□□□ -0.86
AC004540.1-206ENST00000448056 NBPF15Q8N660 670 aa9.71□□□□□ -0.86
AC004540.1-206ENST00000448056 CNTNAP4Q9C0A0 1308 aa9.71□□□□□ -0.86
AC004540.1-206ENST00000448056 GALR2O43603 387 aaPredicted RBP9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 RPS6KA4O75676 772 aa9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 PIP4K2AP48426 406 aaPredicted RBP9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 ZNF827Q17R98 1081 aa9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 ZNF428Q96B54 188 aa9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 AK7Q96M32 723 aa9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 DDX21Q9NR30 783 aaKnown RBP eCLIP9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 TFCP2L1Q9NZI6 479 aa9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 DBF4Q9UBU7 674 aaPredicted RBP9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 ZBTB1Q9Y2K1 713 aa9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 ZNF831Q5JPB2 1677 aa9.7□□□□□ -0.86
AC004540.1-206ENST00000448056 RGPD3A6NKT7 1758 aaPredicted RBP9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 TCERG1O14776 1098 aaKnown RBP9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 GNPATO15228 680 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 MYL6BP14649 208 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 IL6STP40189 918 aaPredicted RBP9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 ERBB4Q15303 1308 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 SLC15A2Q16348 729 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 PROSER3Q2NL68 480 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 SMIM5Q71RC9 77 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 RGPD4Q7Z3J3 1758 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 AMIGO3Q86WK7 504 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 ANO8Q9HCE9 1232 aaPredicted RBP9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 STK32BQ9NY57 414 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 CHPF2Q9P2E5 772 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 TRPC6Q9Y210 931 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 RTCBQ9Y3I0 505 aaKnown RBP9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 STK24Q9Y6E0 443 aa9.69□□□□□ -0.86
AC004540.1-206ENST00000448056 GABBR2O75899 941 aa9.68□□□□□ -0.86
AC004540.1-206ENST00000448056 ANXA1P04083 346 aa9.68□□□□□ -0.86
AC004540.1-206ENST00000448056 RARSP54136 660 aaKnown RBP9.68□□□□□ -0.86
AC004540.1-206ENST00000448056 TRAPPC3LQ5T215 181 aa9.68□□□□□ -0.86
AC004540.1-206ENST00000448056 LRP10Q7Z4F1 713 aa9.68□□□□□ -0.86
AC004540.1-206ENST00000448056 SSH1Q8WYL5 1049 aa9.68□□□□□ -0.86
AC004540.1-206ENST00000448056 STK31Q9BXU1 1019 aa9.68□□□□□ -0.86
AC004540.1-206ENST00000448056 HYPKQ9NX55 129 aa9.68□□□□□ -0.86
AC004540.1-206ENST00000448056 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.68□□□□□ -0.86
AC004540.1-206ENST00000448056 TJP1Q07157 1748 aa9.68□□□□□ -0.86
AC004540.1-206ENST00000448056 A0A087WZG4 1122 aa9.67□□□□□ -0.86
AC004540.1-206ENST00000448056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.67□□□□□ -0.86
AC004540.1-206ENST00000448056 SSFA2P28290 1259 aa9.67□□□□□ -0.86
AC004540.1-206ENST00000448056 ALDH1L2Q3SY69 923 aa9.67□□□□□ -0.86
AC004540.1-206ENST00000448056 COPS6Q7L5N1 327 aa9.67□□□□□ -0.86
AC004540.1-206ENST00000448056 NPM2Q86SE8 214 aaKnown RBP9.67□□□□□ -0.86
AC004540.1-206ENST00000448056 MRPL50Q8N5N7 158 aaKnown RBP9.67□□□□□ -0.86
AC004540.1-206ENST00000448056 FLAD1Q8NFF5 587 aa9.67□□□□□ -0.86
AC004540.1-206ENST00000448056 ARHGEF1Q92888 912 aaKnown RBP9.67□□□□□ -0.86
AC004540.1-206ENST00000448056 CICQ96RK0 1608 aaPredicted RBP9.67□□□□□ -0.86
AC004540.1-206ENST00000448056 PHF14O94880 888 aa9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 AIMP1Q12904 312 aaKnown RBP9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 G2E3Q7L622 706 aa9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 COL23A1Q86Y22 540 aaPredicted RBP9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 XAGE3Q8WTP9 111 aa9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 ARXQ96QS3 562 aa9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 PHAXQ9H814 394 aaKnown RBP9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 TBC1D2BQ9UPU7 963 aa9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 ZNF330Q9Y3S2 320 aaPredicted RBP9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 C5P01031 1676 aa9.66□□□□□ -0.86
AC004540.1-206ENST00000448056 C4BP0C0L5 1744 aa9.65□□□□□ -0.86
AC004540.1-206ENST00000448056 PNPLA7Q6ZV29 1317 aa9.65□□□□□ -0.86
AC004540.1-206ENST00000448056 BCAR3O75815 825 aa9.65□□□□□ -0.86
AC004540.1-206ENST00000448056 RFC4P35249 363 aa9.65□□□□□ -0.86
AC004540.1-206ENST00000448056 TIE1P35590 1138 aa9.65□□□□□ -0.86
AC004540.1-206ENST00000448056 PLCB2Q00722 1185 aa9.65□□□□□ -0.86
AC004540.1-206ENST00000448056 TTLL7Q6ZT98 887 aa9.65□□□□□ -0.86
AC004540.1-206ENST00000448056 BCL2L13Q9BXK5 485 aa9.65□□□□□ -0.86
AC004540.1-206ENST00000448056 SMC4Q9NTJ3 1288 aa9.65□□□□□ -0.86
AC004540.1-206ENST00000448056 RCAN3Q9UKA8 241 aa9.65□□□□□ -0.86
AC004540.1-206ENST00000448056 COL5A3P25940 1745 aaPredicted RBP9.65□□□□□ -0.87
AC004540.1-206ENST00000448056 MYH14Q7Z406 1995 aaKnown RBP9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 RREB1Q92766 1687 aa9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 COL15A1P39059 1388 aa9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 TAF1LQ8IZX4 1826 aa9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 ERVV-1B6SEH8 477 aa9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 ZPR1O75312 459 aa9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 FLIIQ13045 1269 aa9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 R3HDM1Q15032 1099 aaKnown RBP9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 ANKRD13DQ6ZTN6 518 aa9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 DZIP3Q86Y13 1208 aaKnown RBP9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 PDGFDQ9GZP0 370 aaPredicted RBP9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 NARFQ9UHQ1 456 aa9.64□□□□□ -0.87
AC004540.1-206ENST00000448056 NUP188Q5SRE5 1749 aa9.63□□□□□ -0.87
AC004540.1-206ENST00000448056 CAMTA2O94983 1202 aa9.63□□□□□ -0.87
AC004540.1-206ENST00000448056 USPL1Q5W0Q7 1092 aa9.63□□□□□ -0.87
AC004540.1-206ENST00000448056 KSR2Q6VAB6 950 aa9.63□□□□□ -0.87
AC004540.1-206ENST00000448056 KIF6Q6ZMV9 814 aa9.63□□□□□ -0.87
AC004540.1-206ENST00000448056 PLBD2Q8NHP8 589 aa9.63□□□□□ -0.87
AC004540.1-206ENST00000448056 TMEM106CQ9BVX2 250 aa9.63□□□□□ -0.87
AC004540.1-206ENST00000448056 SRP68Q9UHB9 627 aaKnown RBP9.63□□□□□ -0.87
AC004540.1-206ENST00000448056 NOB1Q9ULX3 412 aaKnown RBP9.63□□□□□ -0.87
AC004540.1-206ENST00000448056 MAP3K15Q6ZN16 1313 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms