RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 PRKRIP1Q9H875 184 aaPredicted RBP20.45■□□□□ 0.86
HMGB2-203ENST00000446922 LAMB4A4D0S4 1761 aa20.44■□□□□ 0.86
HMGB2-203ENST00000446922 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
HMGB2-203ENST00000446922 NBPF5PQ86XG9 351 aaPredicted RBP20.44■□□□□ 0.86
HMGB2-203ENST00000446922 CNKSR1Q969H4 720 aa20.44■□□□□ 0.86
HMGB2-203ENST00000446922 RUNDC1Q96C34 613 aa20.44■□□□□ 0.86
HMGB2-203ENST00000446922 THUMPD2Q9BTF0 503 aaKnown RBP20.44■□□□□ 0.86
HMGB2-203ENST00000446922 RNF181Q9P0P0 153 aa20.44■□□□□ 0.86
HMGB2-203ENST00000446922 KLRG2A4D1S0 409 aaPredicted RBP20.43■□□□□ 0.86
HMGB2-203ENST00000446922 SRGNP10124 158 aa20.43■□□□□ 0.86
HMGB2-203ENST00000446922 LMNB1P20700 586 aa20.43■□□□□ 0.86
HMGB2-203ENST00000446922 ZNF622Q969S3 477 aaKnown RBP eCLIP20.43■□□□□ 0.863e-29■■■■□ 24.7
HMGB2-203ENST00000446922 TSPYL4Q9UJ04 414 aa20.43■□□□□ 0.86
HMGB2-203ENST00000446922 KDM2BQ8NHM5 1336 aa20.43■□□□□ 0.86
HMGB2-203ENST00000446922 ANKRD31Q8N7Z5 1873 aa20.42■□□□□ 0.86
HMGB2-203ENST00000446922 SOGA3Q5TF21 947 aa20.42■□□□□ 0.86
HMGB2-203ENST00000446922 MASTLQ96GX5 879 aa20.42■□□□□ 0.86
HMGB2-203ENST00000446922 NIP7Q9Y221 180 aaKnown RBP eCLIP20.42■□□□□ 0.86
HMGB2-203ENST00000446922 TOMM70O94826 608 aa20.41■□□□□ 0.86
HMGB2-203ENST00000446922 SBF1O95248 1867 aa20.41■□□□□ 0.86
HMGB2-203ENST00000446922 KIF6Q6ZMV9 814 aa20.4■□□□□ 0.86
HMGB2-203ENST00000446922 MAP3K15Q6ZN16 1313 aa20.4■□□□□ 0.86
HMGB2-203ENST00000446922 NYXQ9GZU5 481 aa20.4■□□□□ 0.86
HMGB2-203ENST00000446922 RRP7AQ9Y3A4 280 aaKnown RBP20.4■□□□□ 0.86
HMGB2-203ENST00000446922 LTBP3Q9NS15 1303 aa20.39■□□□□ 0.85
HMGB2-203ENST00000446922 HLFQ16534 295 aa20.39■□□□□ 0.85
HMGB2-203ENST00000446922 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
HMGB2-203ENST00000446922 CHL1O00533 1208 aa20.38■□□□□ 0.85
HMGB2-203ENST00000446922 NPR1P16066 1061 aa20.38■□□□□ 0.85
HMGB2-203ENST00000446922 NFKBIEO00221 500 aa20.37■□□□□ 0.85
HMGB2-203ENST00000446922 HSPA6P17066 643 aa20.37■□□□□ 0.85
HMGB2-203ENST00000446922 CCDC24Q8N4L8 307 aa20.37■□□□□ 0.85
HMGB2-203ENST00000446922 C21orf2O43822 256 aa20.36■□□□□ 0.85
HMGB2-203ENST00000446922 MYL6BP14649 208 aa20.36■□□□□ 0.85
HMGB2-203ENST00000446922 RASSF7Q02833 373 aa20.36■□□□□ 0.85
HMGB2-203ENST00000446922 GIGYF2Q6Y7W6 1299 aaKnown RBP20.36■□□□□ 0.85
HMGB2-203ENST00000446922 TRIM35Q9UPQ4 493 aa20.36■□□□□ 0.85
HMGB2-203ENST00000446922 IBTKQ9P2D0 1353 aaPredicted RBP20.35■□□□□ 0.85
HMGB2-203ENST00000446922 GTF2E1P29083 439 aaPredicted RBP20.35■□□□□ 0.85
HMGB2-203ENST00000446922 ALDH1B1P30837 517 aa20.35■□□□□ 0.85
HMGB2-203ENST00000446922 PRPF40BQ6NWY9 871 aaKnown RBP20.35■□□□□ 0.85
HMGB2-203ENST00000446922 TTLL7Q6ZT98 887 aa20.35■□□□□ 0.85
HMGB2-203ENST00000446922 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
HMGB2-203ENST00000446922 NGEFQ8N5V2 710 aa20.35■□□□□ 0.85
HMGB2-203ENST00000446922 RBM46Q8TBY0 533 aaKnown RBP20.35■□□□□ 0.85
HMGB2-203ENST00000446922 NMRK2Q9NPI5 230 aa20.35■□□□□ 0.85
HMGB2-203ENST00000446922 COL11A2P13942 1736 aaPredicted RBP20.34■□□□□ 0.85
HMGB2-203ENST00000446922 GLTPD2A6NH11 291 aa20.34■□□□□ 0.85
HMGB2-203ENST00000446922 PDIA6Q15084 440 aa20.34■□□□□ 0.85
HMGB2-203ENST00000446922 NEUROD2Q15784 382 aa20.34■□□□□ 0.85
HMGB2-203ENST00000446922 LRP10Q7Z4F1 713 aa20.34■□□□□ 0.85
HMGB2-203ENST00000446922 C16orf71Q8IYS4 520 aaPredicted RBP20.34■□□□□ 0.85
HMGB2-203ENST00000446922 ZNF34Q8IZ26 560 aa20.34■□□□□ 0.85
HMGB2-203ENST00000446922 HOXB7P09629 217 aa20.33■□□□□ 0.85
HMGB2-203ENST00000446922 PARP10Q53GL7 1025 aa20.33■□□□□ 0.85
HMGB2-203ENST00000446922 DPY19L2Q6NUT2 758 aa20.33■□□□□ 0.85
HMGB2-203ENST00000446922 C7orf43Q8WVR3 580 aa20.33■□□□□ 0.85
HMGB2-203ENST00000446922 RIC1Q4ADV7 1423 aa20.33■□□□□ 0.84
HMGB2-203ENST00000446922 CEP350Q5VT06 3117 aa20.33■□□□□ 0.84
HMGB2-203ENST00000446922 ARFGEF2Q9Y6D5 1785 aa20.32■□□□□ 0.84
HMGB2-203ENST00000446922 EIF2S2P20042 333 aaKnown RBP20.32■□□□□ 0.84
HMGB2-203ENST00000446922 PRELPP51888 382 aa20.32■□□□□ 0.84
HMGB2-203ENST00000446922 FSTL1Q12841 308 aa20.32■□□□□ 0.84
HMGB2-203ENST00000446922 CFAP44Q96MT7 982 aa20.32■□□□□ 0.84
HMGB2-203ENST00000446922 FER1L6Q2WGJ9 1857 aa20.32■□□□□ 0.84
HMGB2-203ENST00000446922 NUP98P52948 1817 aa20.32■□□□□ 0.84
HMGB2-203ENST00000446922 CRY2Q49AN0 593 aa20.31■□□□□ 0.84
HMGB2-203ENST00000446922 PPP1R42Q7Z4L9 355 aa20.31■□□□□ 0.84
HMGB2-203ENST00000446922 TAOK3Q9H2K8 898 aa20.31■□□□□ 0.84
HMGB2-203ENST00000446922 RRAGCQ9HB90 399 aa20.31■□□□□ 0.84
HMGB2-203ENST00000446922 TNRC6CQ9HCJ0 1690 aaKnown RBP20.3■□□□□ 0.84
HMGB2-203ENST00000446922 VEGFAP15692 232 aaPredicted RBP20.3■□□□□ 0.84
HMGB2-203ENST00000446922 CALD1Q05682 793 aaKnown RBP20.3■□□□□ 0.84
HMGB2-203ENST00000446922 CCDC93Q567U6 631 aa20.3■□□□□ 0.84
HMGB2-203ENST00000446922 HSP90AB3PQ58FF7 597 aa20.3■□□□□ 0.84
HMGB2-203ENST00000446922 RTKN2Q8IZC4 609 aa20.3■□□□□ 0.84
HMGB2-203ENST00000446922 ZBTB3Q9H5J0 574 aa20.3■□□□□ 0.84
HMGB2-203ENST00000446922 DDX21Q9NR30 783 aaKnown RBP eCLIP20.3■□□□□ 0.84
HMGB2-203ENST00000446922 SLX4Q8IY92 1834 aa20.3■□□□□ 0.84
HMGB2-203ENST00000446922 RNF123Q5XPI4 1314 aa20.29■□□□□ 0.84
HMGB2-203ENST00000446922 FAM177BA6PVY3 158 aa20.29■□□□□ 0.84
HMGB2-203ENST00000446922 APLP1P51693 650 aa20.29■□□□□ 0.84
HMGB2-203ENST00000446922 ERFEQ4G0M1 354 aa20.29■□□□□ 0.84
HMGB2-203ENST00000446922 GRIPAP1Q4V328 841 aa20.29■□□□□ 0.84
HMGB2-203ENST00000446922 HOXA10P31260 410 aaPredicted RBP20.28■□□□□ 0.84
HMGB2-203ENST00000446922 SUSD4Q5VX71 490 aa20.28■□□□□ 0.84
HMGB2-203ENST00000446922 CC2D2BQ6DHV5 1058 aa20.28■□□□□ 0.84
HMGB2-203ENST00000446922 ZNF219Q9P2Y4 722 aaPredicted RBP20.28■□□□□ 0.84
HMGB2-203ENST00000446922 UBN2Q6ZU65 1347 aa20.27■□□□□ 0.84
HMGB2-203ENST00000446922 DICER1Q9UPY3 1922 aaKnown RBP20.27■□□□□ 0.84
HMGB2-203ENST00000446922 SLC10A5Q5PT55 438 aa20.27■□□□□ 0.84
HMGB2-203ENST00000446922 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
HMGB2-203ENST00000446922 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
HMGB2-203ENST00000446922 NTSR2O95665 410 aa20.26■□□□□ 0.83
HMGB2-203ENST00000446922 ZNF853P0CG23 659 aa20.26■□□□□ 0.83
HMGB2-203ENST00000446922 GPTP24298 496 aa20.26■□□□□ 0.83
HMGB2-203ENST00000446922 FKBP4Q02790 459 aaKnown RBP eCLIP20.26■□□□□ 0.83
HMGB2-203ENST00000446922 COPS6Q7L5N1 327 aa20.26■□□□□ 0.83
HMGB2-203ENST00000446922 CHMP4AQ9BY43 222 aa20.26■□□□□ 0.83
HMGB2-203ENST00000446922 GNAI1P63096 354 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms