RNA–Protein interactions for RNA: ENST00000446501.6

BRF1-206, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2 BASIC

Gene BRF1, Length 2,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-206ENST00000446501 KIAA2012Q0VF49 1180 aa19.67■□□□□ 0.74
BRF1-206ENST00000446501 ZDHHC9Q9Y397 364 aa19.67■□□□□ 0.74
BRF1-206ENST00000446501 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.67■□□□□ 0.74
BRF1-206ENST00000446501 UPF3BQ9BZI7 483 aaKnown RBP19.67■□□□□ 0.74
BRF1-206ENST00000446501 AMOTQ4VCS5 1084 aa19.66■□□□□ 0.74
BRF1-206ENST00000446501 NLRP2Q9NX02 1062 aa19.66■□□□□ 0.74
BRF1-206ENST00000446501 PA2G4Q9UQ80 394 aaKnown RBP19.66■□□□□ 0.74
BRF1-206ENST00000446501 POLA2Q14181 598 aa19.66■□□□□ 0.74
BRF1-206ENST00000446501 DBF4Q9UBU7 674 aaPredicted RBP19.66■□□□□ 0.74
BRF1-206ENST00000446501 STAP2Q9UGK3 403 aa19.66■□□□□ 0.74
BRF1-206ENST00000446501 PIP4K2AP48426 406 aaPredicted RBP19.65■□□□□ 0.74
BRF1-206ENST00000446501 OS9Q13438 667 aaPredicted RBP19.65■□□□□ 0.74
BRF1-206ENST00000446501 C17orf53Q8N3J3 647 aaPredicted RBP19.65■□□□□ 0.74
BRF1-206ENST00000446501 USP54Q70EL1 1684 aa19.65■□□□□ 0.74
BRF1-206ENST00000446501 C9orf78Q9NZ63 289 aaPredicted RBP19.65■□□□□ 0.74
BRF1-206ENST00000446501 CHRNA2Q15822 529 aa19.64■□□□□ 0.73
BRF1-206ENST00000446501 HOXB7P09629 217 aa19.63■□□□□ 0.73
BRF1-206ENST00000446501 DMTNQ08495 405 aa19.63■□□□□ 0.73
BRF1-206ENST00000446501 PI4K2BQ8TCG2 481 aa19.63■□□□□ 0.73
BRF1-206ENST00000446501 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
BRF1-206ENST00000446501 MYL6BP14649 208 aa19.62■□□□□ 0.73
BRF1-206ENST00000446501 PXDNLA1KZ92 1463 aa19.62■□□□□ 0.73
BRF1-206ENST00000446501 ZSCAN20P17040 1043 aaPredicted RBP19.62■□□□□ 0.73
BRF1-206ENST00000446501 TMX3Q96JJ7 454 aa19.62■□□□□ 0.73
BRF1-206ENST00000446501 ERBB3P21860 1342 aa19.62■□□□□ 0.73
BRF1-206ENST00000446501 MED1Q15648 1581 aaPredicted RBP19.62■□□□□ 0.73
BRF1-206ENST00000446501 KIF1BPQ96EK5 621 aa19.62■□□□□ 0.73
BRF1-206ENST00000446501 MYRIPQ8NFW9 859 aa19.61■□□□□ 0.73
BRF1-206ENST00000446501 TSPY26PQ9H489 355 aa19.61■□□□□ 0.73
BRF1-206ENST00000446501 NFATC2IPQ8NCF5 419 aa19.61■□□□□ 0.73
BRF1-206ENST00000446501 LARP6Q9BRS8 491 aaKnown RBP19.61■□□□□ 0.73
BRF1-206ENST00000446501 C19orf44Q9H6X5 657 aa19.61■□□□□ 0.73
BRF1-206ENST00000446501 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.61■□□□□ 0.73
BRF1-206ENST00000446501 RAB11FIP3O75154 756 aa19.6■□□□□ 0.73
BRF1-206ENST00000446501 PPP4R3BQ5MIZ7 849 aa19.6■□□□□ 0.73
BRF1-206ENST00000446501 GDPD2Q9HCC8 539 aa19.6■□□□□ 0.73
BRF1-206ENST00000446501 DTNBO60941 627 aa19.59■□□□□ 0.73
BRF1-206ENST00000446501 CSB-PGBD3P0DP91 1061 aa19.59■□□□□ 0.73
BRF1-206ENST00000446501 CWC27Q6UX04 472 aaKnown RBP19.59■□□□□ 0.73
BRF1-206ENST00000446501 KSR2Q6VAB6 950 aa19.59■□□□□ 0.73
BRF1-206ENST00000446501 ZNF710Q8N1W2 664 aa19.59■□□□□ 0.73
BRF1-206ENST00000446501 RAPGEF4Q8WZA2 1011 aa19.59■□□□□ 0.73
BRF1-206ENST00000446501 C1orf167Q5SNV9 1468 aa19.59■□□□□ 0.73
BRF1-206ENST00000446501 SPDYE4A6NLX3 237 aa19.59■□□□□ 0.73
BRF1-206ENST00000446501 TTC12Q9H892 705 aaPredicted RBP19.59■□□□□ 0.73
BRF1-206ENST00000446501 SPG7Q9UQ90 795 aa19.59■□□□□ 0.73
BRF1-206ENST00000446501 PLCB2Q00722 1185 aa19.58■□□□□ 0.73
BRF1-206ENST00000446501 KLHDC4Q8TBB5 520 aa19.58■□□□□ 0.72
BRF1-206ENST00000446501 ATF3P18847 181 aa19.57■□□□□ 0.72
BRF1-206ENST00000446501 MCCP23508 829 aa19.57■□□□□ 0.72
BRF1-206ENST00000446501 SUCLG2Q96I99 432 aa19.57■□□□□ 0.72
BRF1-206ENST00000446501 SIL1Q9H173 461 aa19.57■□□□□ 0.72
BRF1-206ENST00000446501 USP25Q9UHP3 1055 aa19.57■□□□□ 0.72
BRF1-206ENST00000446501 ZNF142P52746 1687 aaPredicted RBP19.57■□□□□ 0.72
BRF1-206ENST00000446501 IGSF3O75054 1194 aa19.57■□□□□ 0.72
BRF1-206ENST00000446501 PDIA6Q15084 440 aa19.57■□□□□ 0.72
BRF1-206ENST00000446501 MBD3O95983 291 aa19.56■□□□□ 0.72
BRF1-206ENST00000446501 ATP2B3Q16720 1220 aa19.56■□□□□ 0.72
BRF1-206ENST00000446501 ZNF790Q6PG37 636 aa19.56■□□□□ 0.72
BRF1-206ENST00000446501 KAZALD1Q96I82 304 aa19.56■□□□□ 0.72
BRF1-206ENST00000446501 KDM3BQ7LBC6 1761 aa19.56■□□□□ 0.72
BRF1-206ENST00000446501 NOLC1Q14978 699 aaKnown RBP eCLIP19.56■□□□□ 0.72
BRF1-206ENST00000446501 CACNA1FO60840 1977 aa19.55■□□□□ 0.72
BRF1-206ENST00000446501 BICC1Q9H694 974 aaKnown RBP19.55■□□□□ 0.72
BRF1-206ENST00000446501 SLIT3O75094 1523 aa19.55■□□□□ 0.72
BRF1-206ENST00000446501 RIC3Q7Z5B4 369 aa19.55■□□□□ 0.72
BRF1-206ENST00000446501 ADAMTSL3P82987 1691 aa19.55■□□□□ 0.72
BRF1-206ENST00000446501 CPA1P15085 419 aa19.54■□□□□ 0.72
BRF1-206ENST00000446501 UTP14CQ5TAP6 766 aaKnown RBP19.54■□□□□ 0.72
BRF1-206ENST00000446501 ZNF496Q96IT1 587 aaPredicted RBP19.54■□□□□ 0.72
BRF1-206ENST00000446501 TMEM94Q12767 1356 aa19.54■□□□□ 0.72
BRF1-206ENST00000446501 RASEFQ8IZ41 740 aa19.54■□□□□ 0.72
BRF1-206ENST00000446501 LMO7Q8WWI1 1683 aa19.54■□□□□ 0.72
BRF1-206ENST00000446501 GRM8O00222 908 aa19.54■□□□□ 0.72
BRF1-206ENST00000446501 IGKV5-2P06315 115 aa19.54■□□□□ 0.72
BRF1-206ENST00000446501 CLASRPQ8N2M8 674 aaKnown RBP19.54■□□□□ 0.72
BRF1-206ENST00000446501 DDX54Q8TDD1 881 aaKnown RBP19.54■□□□□ 0.72
BRF1-206ENST00000446501 DDX21Q9NR30 783 aaKnown RBP eCLIP19.54■□□□□ 0.72
BRF1-206ENST00000446501 HYPKQ9NX55 129 aa19.54■□□□□ 0.72
BRF1-206ENST00000446501 HEG1Q9ULI3 1381 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 NPHP3Q7Z494 1330 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 SGSM2O43147 1006 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 CNTROBQ8N137 903 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 XAGE3Q8WTP9 111 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 CCDC8Q9H0W5 538 aaPredicted RBP19.53■□□□□ 0.72
BRF1-206ENST00000446501 USP16Q9Y5T5 823 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 GADD45BO75293 160 aaPredicted RBP19.53■□□□□ 0.72
BRF1-206ENST00000446501 PHKG2P15735 406 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 COPS6Q7L5N1 327 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 AACSQ86V21 672 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 SLC52A2Q9HAB3 445 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 KIF3AQ9Y496 699 aa19.53■□□□□ 0.72
BRF1-206ENST00000446501 AOX1Q06278 1338 aa19.52■□□□□ 0.72
BRF1-206ENST00000446501 HSPA2P54652 639 aa19.52■□□□□ 0.72
BRF1-206ENST00000446501 NCAPD2Q15021 1401 aa19.52■□□□□ 0.72
BRF1-206ENST00000446501 RGPD5Q99666 1765 aa19.52■□□□□ 0.72
BRF1-206ENST00000446501 ALDH1L1O75891 902 aa19.52■□□□□ 0.71
BRF1-206ENST00000446501 TATP17735 454 aaPredicted RBP19.52■□□□□ 0.71
BRF1-206ENST00000446501 LINS1Q8NG48 757 aa19.52■□□□□ 0.71
BRF1-206ENST00000446501 CHMP4AQ9BY43 222 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms