RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 NOS1P29475 1434 aa13.6□□□□□ -0.23
FN1-212ENST00000446046 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
FN1-212ENST00000446046 FERMT2Q96AC1 680 aa13.6□□□□□ -0.23
FN1-212ENST00000446046 ZCRB1Q8TBF4 217 aaKnown RBP13.6□□□□□ -0.23
FN1-212ENST00000446046 EIF3JO75822 258 aaKnown RBP13.6□□□□□ -0.23
FN1-212ENST00000446046 PLCG2P16885 1265 aa13.6□□□□□ -0.23
FN1-212ENST00000446046 TCP11L1Q9NUJ3 509 aa13.6□□□□□ -0.23
FN1-212ENST00000446046 PPM1FP49593 454 aaPredicted RBP13.59□□□□□ -0.23
FN1-212ENST00000446046 ANKRD62A6NC57 917 aa13.59□□□□□ -0.23
FN1-212ENST00000446046 TAF4BQ92750 862 aa13.59□□□□□ -0.23
FN1-212ENST00000446046 NLRP3Q96P20 1036 aa13.59□□□□□ -0.23
FN1-212ENST00000446046 ZNF804AQ7Z570 1209 aa13.59□□□□□ -0.23
FN1-212ENST00000446046 EVI5LQ96CN4 794 aa13.59□□□□□ -0.23
FN1-212ENST00000446046 CIZ1Q9ULV3 898 aaPredicted RBP13.59□□□□□ -0.23
FN1-212ENST00000446046 ERLIN1O75477 346 aa13.59□□□□□ -0.23
FN1-212ENST00000446046 SSR1P43307 286 aaKnown RBP13.59□□□□□ -0.23
FN1-212ENST00000446046 CCDC194A0A1B0GVG4 234 aa13.59□□□□□ -0.23
FN1-212ENST00000446046 MAP4K4O95819 1239 aaPredicted RBP13.59□□□□□ -0.23
FN1-212ENST00000446046 CCDC85AQ96PX6 553 aaPredicted RBP13.59□□□□□ -0.23
FN1-212ENST00000446046 LMTK3Q96Q04 1460 aa13.59□□□□□ -0.23
FN1-212ENST00000446046 ABCC1P33527 1531 aa13.59□□□□□ -0.23
FN1-212ENST00000446046 GIGYF2Q6Y7W6 1299 aaKnown RBP13.58□□□□□ -0.23
FN1-212ENST00000446046 C8orf76Q96K31 380 aa13.58□□□□□ -0.23
FN1-212ENST00000446046 CDCA7Q9BWT1 371 aaPredicted RBP13.58□□□□□ -0.23
FN1-212ENST00000446046 CTAGE5O15320 804 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 LDHAL6AQ6ZMR3 332 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 TMTC2Q8N394 836 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 ANKRD24Q8TF21 1146 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 MX1P20591 662 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 DDB1Q16531 1140 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 KAT14Q9H8E8 782 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 H0YHG0 523 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 TRAK2O60296 914 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 MCM3P25205 808 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 KANK3Q6NY19 840 aa13.58□□□□□ -0.24
FN1-212ENST00000446046 LRRC59Q96AG4 307 aaKnown RBP13.58□□□□□ -0.24
FN1-212ENST00000446046 GCC2Q8IWJ2 1684 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 CHMP4BP1P59074 171 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 MCM10Q7L590 875 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 RTCBQ9Y3I0 505 aaKnown RBP13.57□□□□□ -0.24
FN1-212ENST00000446046 ATP6V1AP38606 617 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 ZFYP08048 801 aaPredicted RBP13.57□□□□□ -0.24
FN1-212ENST00000446046 SPA17Q15506 151 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 JDP2Q8WYK2 163 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 C8orf37Q96NL8 207 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 UTP14AQ9BVJ6 771 aaKnown RBP13.57□□□□□ -0.24
FN1-212ENST00000446046 TNNI2P48788 182 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 CCDC112Q8NEF3 446 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 CCDC148Q8NFR7 591 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 PARP3Q9Y6F1 533 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 IFIT3O14879 490 aaKnown RBP13.57□□□□□ -0.24
FN1-212ENST00000446046 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
FN1-212ENST00000446046 CCDC172P0C7W6 258 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 NUP62CLQ9H1M0 184 aa13.57□□□□□ -0.24
FN1-212ENST00000446046 GNAQP50148 359 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 AXDND1Q5T1B0 1012 aaPredicted RBP13.56□□□□□ -0.24
FN1-212ENST00000446046 MFSD6Q6ZSS7 791 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 UPF3BQ9BZI7 483 aaKnown RBP13.56□□□□□ -0.24
FN1-212ENST00000446046 HMG20BQ9P0W2 317 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 CACNA2D4Q7Z3S7 1137 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 PLCH2O75038 1416 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 UHRF1BP1Q6BDS2 1440 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 RIMS2Q9UQ26 1411 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 NLRP5P59047 1200 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 APBB1IPQ7Z5R6 666 aaPredicted RBP13.56□□□□□ -0.24
FN1-212ENST00000446046 FAM114A1Q8IWE2 563 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 SCAND2PQ9GZW5 306 aaPredicted RBP13.56□□□□□ -0.24
FN1-212ENST00000446046 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 MAST1Q9Y2H9 1570 aa13.56□□□□□ -0.24
FN1-212ENST00000446046 UGGT2Q9NYU1 1516 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 LEKR1Q6ZMV7 388 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 HOOK2Q96ED9 719 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 CNNM2Q9H8M5 875 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 MAP3K2Q9Y2U5 619 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 CHD1O14646 1710 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 TAOK3Q9H2K8 898 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 BOLA2Q9H3K6 86 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 CLEC11AQ9Y240 323 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 ZNF710Q8N1W2 664 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 IBSPP21815 317 aaPredicted RBP13.55□□□□□ -0.24
FN1-212ENST00000446046 KRT23Q9C075 422 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 IL16Q14005 1332 aa13.55□□□□□ -0.24
FN1-212ENST00000446046 EYA3Q99504 573 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 SAMM50Q9Y512 469 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 PPIP5K1Q6PFW1 1433 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 PIBF1Q8WXW3 757 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 CERS3Q8IU89 383 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 NUP160Q12769 1436 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 HOOK3Q86VS8 718 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 RPRD2Q5VT52 1461 aaKnown RBP13.54□□□□□ -0.24
FN1-212ENST00000446046 SHROOM2Q13796 1616 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 SYCP3Q8IZU3 236 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 PABPN1LA6NDY0 278 aaKnown RBP13.54□□□□□ -0.24
FN1-212ENST00000446046 BMP15O95972 392 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 GRIPAP1Q4V328 841 aa13.54□□□□□ -0.24
FN1-212ENST00000446046 TMEM57Q8N5G2 664 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms