RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 GAS2L2Q8NHY3 880 aa31.94■■■□□ 2.7
NUP50-211ENST00000445721 MASTLQ96GX5 879 aa31.94■■■□□ 2.7
NUP50-211ENST00000445721 IQCA1LA6NCM1 817 aa31.91■■■□□ 2.7
NUP50-211ENST00000445721 DZIP3Q86Y13 1208 aaKnown RBP31.91■■■□□ 2.7
NUP50-211ENST00000445721 KIF7Q2M1P5 1343 aa31.91■■■□□ 2.7
NUP50-211ENST00000445721 FOXN1O15353 648 aa31.89■■■□□ 2.7
NUP50-211ENST00000445721 PER1O15534 1290 aaPredicted RBP31.89■■■□□ 2.7
NUP50-211ENST00000445721 KCNQ3O43525 872 aa31.89■■■□□ 2.7
NUP50-211ENST00000445721 LDHDQ86WU2 507 aa31.89■■■□□ 2.7
NUP50-211ENST00000445721 CNTNAP1P78357 1384 aa31.89■■■□□ 2.7
NUP50-211ENST00000445721 TAF1DQ9H5J8 278 aaPredicted RBP31.88■■■□□ 2.69
NUP50-211ENST00000445721 CACNA1SQ13698 1873 aa31.87■■■□□ 2.69
NUP50-211ENST00000445721 PASKQ96RG2 1323 aa31.87■■■□□ 2.69
NUP50-211ENST00000445721 PIP4K2AP48426 406 aaPredicted RBP31.87■■■□□ 2.69
NUP50-211ENST00000445721 CNGB1Q14028 1251 aaPredicted RBP31.87■■■□□ 2.69
NUP50-211ENST00000445721 NBPF5PQ86XG9 351 aaPredicted RBP31.87■■■□□ 2.69
NUP50-211ENST00000445721 L3MBTL3Q96JM7 780 aaPredicted RBP31.87■■■□□ 2.69
NUP50-211ENST00000445721 BTBD11A6QL63 1104 aa31.86■■■□□ 2.69
NUP50-211ENST00000445721 CCDC93Q567U6 631 aa31.86■■■□□ 2.69
NUP50-211ENST00000445721 C7orf43Q8WVR3 580 aa31.86■■■□□ 2.69
NUP50-211ENST00000445721 USP16Q9Y5T5 823 aa31.85■■■□□ 2.69
NUP50-211ENST00000445721 SIPA1L3O60292 1781 aaPredicted RBP31.84■■■□□ 2.69
NUP50-211ENST00000445721 EAPPQ56P03 285 aaPredicted RBP31.84■■■□□ 2.69
NUP50-211ENST00000445721 AIDAQ96BJ3 306 aa31.83■■■□□ 2.69
NUP50-211ENST00000445721 TMEM88BA6NKF7 163 aa31.82■■■□□ 2.68
NUP50-211ENST00000445721 NPR1P16066 1061 aa31.82■■■□□ 2.68
NUP50-211ENST00000445721 VEGFBP49765 207 aa31.82■■■□□ 2.68
NUP50-211ENST00000445721 CLEC4GQ6UXB4 293 aa31.82■■■□□ 2.68
NUP50-211ENST00000445721 PRDM10Q9NQV6 1147 aa31.82■■■□□ 2.68
NUP50-211ENST00000445721 ZNF277Q9NRM2 450 aaPredicted RBP31.82■■■□□ 2.68
NUP50-211ENST00000445721 CLEC11AQ9Y240 323 aa31.82■■■□□ 2.68
NUP50-211ENST00000445721 COL3A1P02461 1466 aaPredicted RBP31.82■■■□□ 2.68
NUP50-211ENST00000445721 CEMIPQ8WUJ3 1361 aa31.81■■■□□ 2.68
NUP50-211ENST00000445721 ITGBL1O95965 494 aaPredicted RBP31.81■■■□□ 2.68
NUP50-211ENST00000445721 FKBP4Q02790 459 aaKnown RBP eCLIP31.81■■■□□ 2.68
NUP50-211ENST00000445721 CTCFP49711 727 aaPredicted RBP31.8■■■□□ 2.68
NUP50-211ENST00000445721 PHACTR3Q96KR7 559 aa31.8■■■□□ 2.68
NUP50-211ENST00000445721 ZNF652Q9Y2D9 606 aa31.8■■■□□ 2.68
NUP50-211ENST00000445721 ARFGEF2Q9Y6D5 1785 aa31.8■■■□□ 2.68
NUP50-211ENST00000445721 SCN4AP35499 1836 aa31.79■■■□□ 2.68
NUP50-211ENST00000445721 ZNF541Q9H0D2 1346 aa31.79■■■□□ 2.68
NUP50-211ENST00000445721 PRAMEF22A3QJZ6 481 aa31.79■■■□□ 2.68
NUP50-211ENST00000445721 OLFM4Q6UX06 510 aa31.79■■■□□ 2.68
NUP50-211ENST00000445721 HACL1Q9UJ83 578 aa31.79■■■□□ 2.68
NUP50-211ENST00000445721 BCORQ6W2J9 1755 aa31.78■■■□□ 2.68
NUP50-211ENST00000445721 TPTE2Q6XPS3 522 aa31.77■■■□□ 2.68
NUP50-211ENST00000445721 KLRG2A4D1S0 409 aaPredicted RBP31.76■■■□□ 2.67
NUP50-211ENST00000445721 PRKAR2BP31323 418 aa31.76■■■□□ 2.67
NUP50-211ENST00000445721 RTKN2Q8IZC4 609 aa31.76■■■□□ 2.67
NUP50-211ENST00000445721 FAM177BA6PVY3 158 aa31.75■■■□□ 2.67
NUP50-211ENST00000445721 SNRPA1P09661 255 aaKnown RBP31.75■■■□□ 2.67
NUP50-211ENST00000445721 EPHX2P34913 555 aa31.75■■■□□ 2.67
NUP50-211ENST00000445721 NIP7Q9Y221 180 aaKnown RBP eCLIP31.75■■■□□ 2.67
NUP50-211ENST00000445721 CCER1Q8TC90 406 aaPredicted RBP31.74■■■□□ 2.67
NUP50-211ENST00000445721 WBP1LQ9NX94 342 aa31.73■■■□□ 2.67
NUP50-211ENST00000445721 LBX1P52954 281 aa31.72■■■□□ 2.67
NUP50-211ENST00000445721 RSPH6AQ9H0K4 717 aa31.72■■■□□ 2.67
NUP50-211ENST00000445721 MAP1SQ66K74 1059 aaPredicted RBP31.71■■■□□ 2.67
NUP50-211ENST00000445721 PNMA8AQ86V59 439 aaPredicted RBP31.71■■■□□ 2.67
NUP50-211ENST00000445721 CNTROBQ8N137 903 aa31.71■■■□□ 2.67
NUP50-211ENST00000445721 SYNE4Q8N205 404 aa31.71■■■□□ 2.67
NUP50-211ENST00000445721 RNF123Q5XPI4 1314 aa31.71■■■□□ 2.67
NUP50-211ENST00000445721 NPC1L1Q9UHC9 1359 aa31.7■■■□□ 2.67
NUP50-211ENST00000445721 NBPF26B4DH59 902 aa31.7■■■□□ 2.67
NUP50-211ENST00000445721 IARSP41252 1262 aaKnown RBP31.7■■■□□ 2.67
NUP50-211ENST00000445721 NBPF10Q6P3W6 841 aaKnown RBP31.7■■■□□ 2.67
NUP50-211ENST00000445721 NBPF15Q8N660 670 aa31.7■■■□□ 2.67
NUP50-211ENST00000445721 FZD9O00144 591 aa31.69■■■□□ 2.66
NUP50-211ENST00000445721 ALDH1B1P30837 517 aa31.69■■■□□ 2.66
NUP50-211ENST00000445721 DEFB115Q30KQ5 88 aa31.69■■■□□ 2.66
NUP50-211ENST00000445721 MCM10Q7L590 875 aa31.69■■■□□ 2.66
NUP50-211ENST00000445721 RTF1Q92541 710 aaKnown RBP31.69■■■□□ 2.66
NUP50-211ENST00000445721 GTF2E1P29083 439 aaPredicted RBP31.68■■■□□ 2.66
NUP50-211ENST00000445721 RASSF10A6NK89 507 aa31.67■■■□□ 2.66
NUP50-211ENST00000445721 RGL2O15211 777 aa31.66■■■□□ 2.66
NUP50-211ENST00000445721 GPC2Q8N158 579 aa31.66■■■□□ 2.66
NUP50-211ENST00000445721 CFAP53Q96M91 514 aa31.66■■■□□ 2.66
NUP50-211ENST00000445721 HLFQ16534 295 aa31.65■■■□□ 2.66
NUP50-211ENST00000445721 JDP2Q8WYK2 163 aa31.65■■■□□ 2.66
NUP50-211ENST00000445721 ABT1Q9ULW3 272 aaKnown RBP31.64■■■□□ 2.66
NUP50-211ENST00000445721 ADAMTSL1Q8N6G6 1762 aa31.63■■■□□ 2.65
NUP50-211ENST00000445721 NUDCQ9Y266 331 aa31.63■■■□□ 2.65
NUP50-211ENST00000445721 HSPA8P11142 646 aaKnown RBP31.62■■■□□ 2.65
NUP50-211ENST00000445721 DCTN1Q14203 1278 aa31.62■■■□□ 2.65
NUP50-211ENST00000445721 PSMD1Q99460 953 aa31.62■■■□□ 2.65
NUP50-211ENST00000445721 WDR33Q9C0J8 1336 aaKnown RBP31.62■■■□□ 2.65
NUP50-211ENST00000445721 GJA3Q9Y6H8 435 aa31.62■■■□□ 2.65
NUP50-211ENST00000445721 U2AF1L5P0DN76 240 aaPredicted RBP31.61■■■□□ 2.65
NUP50-211ENST00000445721 U2AF1Q01081 240 aaKnown RBP eCLIP31.61■■■□□ 2.65
NUP50-211ENST00000445721 EIF6P56537 245 aaKnown RBP31.6■■■□□ 2.65
NUP50-211ENST00000445721 MAP2K1Q02750 393 aaPredicted RBP31.6■■■□□ 2.65
NUP50-211ENST00000445721 NUTM1Q86Y26 1132 aa31.58■■■□□ 2.65
NUP50-211ENST00000445721 NGEFQ8N5V2 710 aa31.58■■■□□ 2.65
NUP50-211ENST00000445721 DDX21Q9NR30 783 aaKnown RBP eCLIP31.58■■■□□ 2.65
NUP50-211ENST00000445721 LMOD1P29536 600 aaPredicted RBP31.57■■■□□ 2.64
NUP50-211ENST00000445721 CRY2Q49AN0 593 aa31.57■■■□□ 2.64
NUP50-211ENST00000445721 CC2D2BQ6DHV5 1058 aa31.57■■■□□ 2.64
NUP50-211ENST00000445721 ABHD8Q96I13 439 aa31.57■■■□□ 2.64
NUP50-211ENST00000445721 NYXQ9GZU5 481 aa31.57■■■□□ 2.64
NUP50-211ENST00000445721 TAF7Q15545 349 aaPredicted RBP31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms