RNA–Protein interactions for RNA: ENST00000444870.6

SMIM1-201, Transcript of small integral membrane protein 1 (Vel blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM1, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1-201ENST00000444870 ANKRD31Q8N7Z5 1873 aa25.87■■□□□ 1.73
SMIM1-201ENST00000444870 MASTLQ96GX5 879 aa25.86■■□□□ 1.73
SMIM1-201ENST00000444870 LTBP3Q9NS15 1303 aa25.86■■□□□ 1.73
SMIM1-201ENST00000444870 CREBZFQ9NS37 354 aa25.85■■□□□ 1.73
SMIM1-201ENST00000444870 USP16Q9Y5T5 823 aa25.85■■□□□ 1.73
SMIM1-201ENST00000444870 NBPF5PQ86XG9 351 aaPredicted RBP25.84■■□□□ 1.73
SMIM1-201ENST00000444870 PHACTR3Q96KR7 559 aa25.84■■□□□ 1.73
SMIM1-201ENST00000444870 PRAMEF22A3QJZ6 481 aa25.83■■□□□ 1.73
SMIM1-201ENST00000444870 SOGA3Q5TF21 947 aa25.83■■□□□ 1.73
SMIM1-201ENST00000444870 COL11A2P13942 1736 aaPredicted RBP25.83■■□□□ 1.72
SMIM1-201ENST00000444870 PRKAR2BP31323 418 aa25.82■■□□□ 1.72
SMIM1-201ENST00000444870 SCN7AQ01118 1682 aa25.81■■□□□ 1.72
SMIM1-201ENST00000444870 COL3A1P02461 1466 aaPredicted RBP25.81■■□□□ 1.72
SMIM1-201ENST00000444870 FAM177BA6PVY3 158 aa25.81■■□□□ 1.72
SMIM1-201ENST00000444870 SLX4Q8IY92 1834 aa25.8■■□□□ 1.72
SMIM1-201ENST00000444870 FER1L6Q2WGJ9 1857 aa25.8■■□□□ 1.72
SMIM1-201ENST00000444870 IQCA1LA6NCM1 817 aa25.79■■□□□ 1.72
SMIM1-201ENST00000444870 CCDC93Q567U6 631 aa25.79■■□□□ 1.72
SMIM1-201ENST00000444870 EAPPQ56P03 285 aaPredicted RBP25.79■■□□□ 1.72
SMIM1-201ENST00000444870 ZNF277Q9NRM2 450 aaPredicted RBP25.79■■□□□ 1.72
SMIM1-201ENST00000444870 CEMIPQ8WUJ3 1361 aa25.79■■□□□ 1.72
SMIM1-201ENST00000444870 OLFM4Q6UX06 510 aa25.78■■□□□ 1.72
SMIM1-201ENST00000444870 TAF1DQ9H5J8 278 aaPredicted RBP25.78■■□□□ 1.72
SMIM1-201ENST00000444870 CLEC11AQ9Y240 323 aa25.78■■□□□ 1.72
SMIM1-201ENST00000444870 ZNF652Q9Y2D9 606 aa25.78■■□□□ 1.72
SMIM1-201ENST00000444870 NPR1P16066 1061 aa25.77■■□□□ 1.72
SMIM1-201ENST00000444870 MCM10Q7L590 875 aa25.77■■□□□ 1.72
SMIM1-201ENST00000444870 LDHDQ86WU2 507 aa25.77■■□□□ 1.72
SMIM1-201ENST00000444870 C7orf43Q8WVR3 580 aa25.77■■□□□ 1.72
SMIM1-201ENST00000444870 SNRPA1P09661 255 aaKnown RBP25.76■■□□□ 1.71
SMIM1-201ENST00000444870 CLEC4GQ6UXB4 293 aa25.76■■□□□ 1.71
SMIM1-201ENST00000444870 RTF1Q92541 710 aaKnown RBP25.76■■□□□ 1.71
SMIM1-201ENST00000444870 RSPH6AQ9H0K4 717 aa25.76■■□□□ 1.71
SMIM1-201ENST00000444870 NIP7Q9Y221 180 aaKnown RBP eCLIP25.76■■□□□ 1.71
SMIM1-201ENST00000444870 DICER1Q9UPY3 1922 aaKnown RBP25.75■■□□□ 1.71
SMIM1-201ENST00000444870 ZNF541Q9H0D2 1346 aa25.75■■□□□ 1.71
SMIM1-201ENST00000444870 FOXN1O15353 648 aa25.75■■□□□ 1.71
SMIM1-201ENST00000444870 TPTE2Q6XPS3 522 aa25.75■■□□□ 1.71
SMIM1-201ENST00000444870 CFAP53Q96M91 514 aa25.75■■□□□ 1.71
SMIM1-201ENST00000444870 FKBP4Q02790 459 aaKnown RBP eCLIP25.74■■□□□ 1.71
SMIM1-201ENST00000444870 L3MBTL3Q96JM7 780 aaPredicted RBP25.74■■□□□ 1.71
SMIM1-201ENST00000444870 CNTNAP1P78357 1384 aa25.73■■□□□ 1.71
SMIM1-201ENST00000444870 PASKQ96RG2 1323 aa25.73■■□□□ 1.71
SMIM1-201ENST00000444870 DCTN1Q14203 1278 aa25.73■■□□□ 1.71
SMIM1-201ENST00000444870 NBPF26B4DH59 902 aa25.72■■□□□ 1.71
SMIM1-201ENST00000444870 U2AF1L5P0DN76 240 aaPredicted RBP25.72■■□□□ 1.71
SMIM1-201ENST00000444870 GTF2E1P29083 439 aaPredicted RBP25.72■■□□□ 1.71
SMIM1-201ENST00000444870 U2AF1Q01081 240 aaKnown RBP eCLIP25.72■■□□□ 1.71
SMIM1-201ENST00000444870 NBPF10Q6P3W6 841 aaKnown RBP25.72■■□□□ 1.71
SMIM1-201ENST00000444870 NBPF15Q8N660 670 aa25.72■■□□□ 1.71
SMIM1-201ENST00000444870 HACL1Q9UJ83 578 aa25.72■■□□□ 1.71
SMIM1-201ENST00000444870 NUDCQ9Y266 331 aa25.72■■□□□ 1.71
SMIM1-201ENST00000444870 CACNA1SQ13698 1873 aa25.72■■□□□ 1.71
SMIM1-201ENST00000444870 SIPA1L3O60292 1781 aaPredicted RBP25.72■■□□□ 1.71
SMIM1-201ENST00000444870 NPC1L1Q9UHC9 1359 aa25.71■■□□□ 1.71
SMIM1-201ENST00000444870 TMEM88BA6NKF7 163 aa25.71■■□□□ 1.71
SMIM1-201ENST00000444870 VEGFBP49765 207 aa25.71■■□□□ 1.71
SMIM1-201ENST00000444870 AIDAQ96BJ3 306 aa25.71■■□□□ 1.71
SMIM1-201ENST00000444870 ITGBL1O95965 494 aaPredicted RBP25.7■■□□□ 1.7
SMIM1-201ENST00000444870 EPHX2P34913 555 aa25.7■■□□□ 1.7
SMIM1-201ENST00000444870 RTKN2Q8IZC4 609 aa25.7■■□□□ 1.7
SMIM1-201ENST00000444870 HLFQ16534 295 aa25.69■■□□□ 1.7
SMIM1-201ENST00000444870 SYNE4Q8N205 404 aa25.69■■□□□ 1.7
SMIM1-201ENST00000444870 NGEFQ8N5V2 710 aa25.69■■□□□ 1.7
SMIM1-201ENST00000444870 RNF123Q5XPI4 1314 aa25.68■■□□□ 1.7
SMIM1-201ENST00000444870 KLRG2A4D1S0 409 aaPredicted RBP25.68■■□□□ 1.7
SMIM1-201ENST00000444870 MIS18AQ9NYP9 233 aa25.68■■□□□ 1.7
SMIM1-201ENST00000444870 ALDH1B1P30837 517 aa25.67■■□□□ 1.7
SMIM1-201ENST00000444870 IARSP41252 1262 aaKnown RBP25.67■■□□□ 1.7
SMIM1-201ENST00000444870 MAP1SQ66K74 1059 aaPredicted RBP25.67■■□□□ 1.7
SMIM1-201ENST00000444870 BCORQ6W2J9 1755 aa25.66■■□□□ 1.7
SMIM1-201ENST00000444870 CTCFP49711 727 aaPredicted RBP25.65■■□□□ 1.7
SMIM1-201ENST00000444870 CNTROBQ8N137 903 aa25.65■■□□□ 1.7
SMIM1-201ENST00000444870 NUTM1Q86Y26 1132 aa25.64■■□□□ 1.7
SMIM1-201ENST00000444870 PRDM10Q9NQV6 1147 aa25.64■■□□□ 1.7
SMIM1-201ENST00000444870 GJA3Q9Y6H8 435 aa25.64■■□□□ 1.7
SMIM1-201ENST00000444870 PNMA8AQ86V59 439 aaPredicted RBP25.63■■□□□ 1.69
SMIM1-201ENST00000444870 JDP2Q8WYK2 163 aa25.63■■□□□ 1.69
SMIM1-201ENST00000444870 FZD9O00144 591 aa25.62■■□□□ 1.69
SMIM1-201ENST00000444870 LBX1P52954 281 aa25.62■■□□□ 1.69
SMIM1-201ENST00000444870 TAF7Q15545 349 aaPredicted RBP25.62■■□□□ 1.69
SMIM1-201ENST00000444870 DEFB115Q30KQ5 88 aa25.62■■□□□ 1.69
SMIM1-201ENST00000444870 ARFGEF2Q9Y6D5 1785 aa25.61■■□□□ 1.69
SMIM1-201ENST00000444870 WBP1LQ9NX94 342 aa25.61■■□□□ 1.69
SMIM1-201ENST00000444870 ABT1Q9ULW3 272 aaKnown RBP25.61■■□□□ 1.69
SMIM1-201ENST00000444870 SCN4AP35499 1836 aa25.6■■□□□ 1.69
SMIM1-201ENST00000444870 TCERG1O14776 1098 aaKnown RBP25.6■■□□□ 1.69
SMIM1-201ENST00000444870 PPP2R1AP30153 589 aa25.6■■□□□ 1.69
SMIM1-201ENST00000444870 GPC2Q8N158 579 aa25.6■■□□□ 1.69
SMIM1-201ENST00000444870 RRP7AQ9Y3A4 280 aaKnown RBP25.6■■□□□ 1.69
SMIM1-201ENST00000444870 RGL2O15211 777 aa25.59■■□□□ 1.69
SMIM1-201ENST00000444870 EIF6P56537 245 aaKnown RBP25.59■■□□□ 1.69
SMIM1-201ENST00000444870 ABCC12Q96J65 1359 aa25.58■■□□□ 1.69
SMIM1-201ENST00000444870 HTATSF1O43719 755 aaKnown RBP25.58■■□□□ 1.69
SMIM1-201ENST00000444870 GPTP24298 496 aa25.58■■□□□ 1.69
SMIM1-201ENST00000444870 RPGRQ92834 1020 aaKnown RBP25.58■■□□□ 1.69
SMIM1-201ENST00000444870 NYXQ9GZU5 481 aa25.58■■□□□ 1.69
SMIM1-201ENST00000444870 TTLL7Q6ZT98 887 aa25.57■■□□□ 1.68
SMIM1-201ENST00000444870 PSMD1Q99460 953 aa25.57■■□□□ 1.68
SMIM1-201ENST00000444870 RASSF10A6NK89 507 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms