RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 DLG5Q8TDM6 1919 aa27.77■■■□□ 2.04
VSX1-206ENST00000444511 SBF1O95248 1867 aa27.76■■■□□ 2.04
VSX1-206ENST00000444511 RGL2O15211 777 aa27.76■■■□□ 2.03
VSX1-206ENST00000444511 PRELPP51888 382 aa27.76■■■□□ 2.03
VSX1-206ENST00000444511 RRAGCQ9HB90 399 aa27.76■■■□□ 2.03
VSX1-206ENST00000444511 NIP7Q9Y221 180 aaKnown RBP eCLIP27.76■■■□□ 2.03
VSX1-206ENST00000444511 EIF4A1P60842 406 aaKnown RBP27.75■■■□□ 2.03
VSX1-206ENST00000444511 DDX10Q13206 875 aaKnown RBP27.75■■■□□ 2.03
VSX1-206ENST00000444511 STYK1Q6J9G0 422 aa27.75■■■□□ 2.03
VSX1-206ENST00000444511 RBM46Q8TBY0 533 aaKnown RBP27.75■■■□□ 2.03
VSX1-206ENST00000444511 CNKSR1Q969H4 720 aa27.75■■■□□ 2.03
VSX1-206ENST00000444511 COL11A2P13942 1736 aaPredicted RBP27.75■■■□□ 2.03
VSX1-206ENST00000444511 CEP350Q5VT06 3117 aa27.74■■■□□ 2.03
VSX1-206ENST00000444511 SRGNP10124 158 aa27.74■■■□□ 2.03
VSX1-206ENST00000444511 LAMB4A4D0S4 1761 aa27.73■■■□□ 2.03
VSX1-206ENST00000444511 KDM3BQ7LBC6 1761 aa27.73■■■□□ 2.03
VSX1-206ENST00000444511 TPTE2Q6XPS3 522 aa27.73■■■□□ 2.03
VSX1-206ENST00000444511 NGEFQ8N5V2 710 aa27.73■■■□□ 2.03
VSX1-206ENST00000444511 MASTLQ96GX5 879 aa27.73■■■□□ 2.03
VSX1-206ENST00000444511 APLP1P51693 650 aa27.72■■■□□ 2.03
VSX1-206ENST00000444511 FAM177BA6PVY3 158 aa27.71■■■□□ 2.03
VSX1-206ENST00000444511 HLFQ16534 295 aa27.71■■■□□ 2.03
VSX1-206ENST00000444511 PRPF40BQ6NWY9 871 aaKnown RBP27.71■■■□□ 2.03
VSX1-206ENST00000444511 RRP7AQ9Y3A4 280 aaKnown RBP27.71■■■□□ 2.03
VSX1-206ENST00000444511 RIPK4P57078 832 aa27.7■■■□□ 2.02
VSX1-206ENST00000444511 MYBBP1AQ9BQG0 1328 aaKnown RBP27.69■■■□□ 2.02
VSX1-206ENST00000444511 TNRC6CQ9HCJ0 1690 aaKnown RBP27.69■■■□□ 2.02
VSX1-206ENST00000444511 GLTPD2A6NH11 291 aa27.69■■■□□ 2.02
VSX1-206ENST00000444511 SOGA3Q5TF21 947 aa27.69■■■□□ 2.02
VSX1-206ENST00000444511 TSPYL4Q9UJ04 414 aa27.69■■■□□ 2.02
VSX1-206ENST00000444511 MYL6BP14649 208 aa27.68■■■□□ 2.02
VSX1-206ENST00000444511 GTF2E1P29083 439 aaPredicted RBP27.68■■■□□ 2.02
VSX1-206ENST00000444511 KIF6Q6ZMV9 814 aa27.68■■■□□ 2.02
VSX1-206ENST00000444511 TAOK3Q9H2K8 898 aa27.68■■■□□ 2.02
VSX1-206ENST00000444511 ERVV-1B6SEH8 477 aa27.67■■■□□ 2.02
VSX1-206ENST00000444511 NPR1P16066 1061 aa27.67■■■□□ 2.02
VSX1-206ENST00000444511 FSTL1Q12841 308 aa27.67■■■□□ 2.02
VSX1-206ENST00000444511 LTBP3Q9NS15 1303 aa27.67■■■□□ 2.02
VSX1-206ENST00000444511 LMOD3Q0VAK6 560 aa27.66■■■□□ 2.02
VSX1-206ENST00000444511 ERFEQ4G0M1 354 aa27.66■■■□□ 2.02
VSX1-206ENST00000444511 MAP3K15Q6ZN16 1313 aa27.66■■■□□ 2.02
VSX1-206ENST00000444511 TIAM2Q8IVF5 1701 aa27.65■■■□□ 2.02
VSX1-206ENST00000444511 VEGFAP15692 232 aaPredicted RBP27.65■■■□□ 2.02
VSX1-206ENST00000444511 TMPOP42166 694 aaKnown RBP27.65■■■□□ 2.02
VSX1-206ENST00000444511 DPY19L2Q6NUT2 758 aa27.65■■■□□ 2.02
VSX1-206ENST00000444511 KLRG2A4D1S0 409 aaPredicted RBP27.64■■■□□ 2.02
VSX1-206ENST00000444511 TTLL7Q6ZT98 887 aa27.64■■■□□ 2.02
VSX1-206ENST00000444511 SLX4Q8IY92 1834 aa27.63■■■□□ 2.01
VSX1-206ENST00000444511 NYXQ9GZU5 481 aa27.63■■■□□ 2.01
VSX1-206ENST00000444511 ERBB4Q15303 1308 aa27.63■■■□□ 2.01
VSX1-206ENST00000444511 SMC1BQ8NDV3 1235 aa27.62■■■□□ 2.01
VSX1-206ENST00000444511 ZBTB3Q9H5J0 574 aa27.62■■■□□ 2.01
VSX1-206ENST00000444511 BABAM1Q9NWV8 329 aa27.62■■■□□ 2.01
VSX1-206ENST00000444511 FER1L6Q2WGJ9 1857 aa27.61■■■□□ 2.01
VSX1-206ENST00000444511 WDR43Q15061 677 aaKnown RBP eCLIP27.61■■■□□ 2.01
VSX1-206ENST00000444511 CCDC93Q567U6 631 aa27.61■■■□□ 2.01
VSX1-206ENST00000444511 CCDC146Q8IYE0 955 aa27.61■■■□□ 2.01
VSX1-206ENST00000444511 CCDC88AQ3V6T2 1871 aa27.6■■■□□ 2.01
VSX1-206ENST00000444511 C7orf43Q8WVR3 580 aa27.6■■■□□ 2.01
VSX1-206ENST00000444511 ARFGEF2Q9Y6D5 1785 aa27.6■■■□□ 2.01
VSX1-206ENST00000444511 CACNA1SQ13698 1873 aa27.59■■■□□ 2.01
VSX1-206ENST00000444511 EIF2S2P20042 333 aaKnown RBP27.59■■■□□ 2.01
VSX1-206ENST00000444511 GPTP24298 496 aa27.59■■■□□ 2.01
VSX1-206ENST00000444511 NEUROD2Q15784 382 aa27.59■■■□□ 2.01
VSX1-206ENST00000444511 NUTM1Q86Y26 1132 aa27.59■■■□□ 2.01
VSX1-206ENST00000444511 ALDH1B1P30837 517 aa27.58■■■□□ 2.01
VSX1-206ENST00000444511 RUNDC1Q96C34 613 aa27.57■■■□□ 2
VSX1-206ENST00000444511 ABCC12Q96J65 1359 aa27.57■■■□□ 2
VSX1-206ENST00000444511 GIGYF2Q6Y7W6 1299 aaKnown RBP27.55■■■□□ 2
VSX1-206ENST00000444511 DNAJC5GQ8N7S2 189 aa27.55■■■□□ 2
VSX1-206ENST00000444511 UBN2Q6ZU65 1347 aa27.55■■■□□ 2
VSX1-206ENST00000444511 IBTKQ9P2D0 1353 aaPredicted RBP27.55■■■□□ 2
VSX1-206ENST00000444511 FKBP4Q02790 459 aaKnown RBP eCLIP27.54■■■□□ 2
VSX1-206ENST00000444511 PDIA6Q15084 440 aa27.54■■■□□ 2
VSX1-206ENST00000444511 CRY2Q49AN0 593 aa27.54■■■□□ 2
VSX1-206ENST00000444511 SUSD4Q5VX71 490 aa27.54■■■□□ 2
VSX1-206ENST00000444511 ZNF34Q8IZ26 560 aa27.54■■■□□ 2
VSX1-206ENST00000444511 RTKN2Q8IZC4 609 aa27.54■■■□□ 2
VSX1-206ENST00000444511 NUP98P52948 1817 aa27.53■■■□□ 2
VSX1-206ENST00000444511 WDR90Q96KV7 1748 aa27.53■■■□□ 2
VSX1-206ENST00000444511 POTECB2RU33 542 aa27.53■■■□□ 2
VSX1-206ENST00000444511 HTRA3P83110 453 aa27.53■■■□□ 2
VSX1-206ENST00000444511 OLFM4Q6UX06 510 aa27.53■■■□□ 2
VSX1-206ENST00000444511 DICER1Q9UPY3 1922 aaKnown RBP27.53■■■□□ 2
VSX1-206ENST00000444511 LRP10Q7Z4F1 713 aa27.52■■■□□ 2
VSX1-206ENST00000444511 RPGRQ92834 1020 aaKnown RBP27.52■■■□□ 2
VSX1-206ENST00000444511 LAS1LQ9Y4W2 734 aaKnown RBP27.52■■■□□ 2
VSX1-206ENST00000444511 DDNO94850 711 aaPredicted RBP27.51■■□□□ 1.99
VSX1-206ENST00000444511 ANXA1P04083 346 aa27.51■■□□□ 1.99
VSX1-206ENST00000444511 PROSER3Q2NL68 480 aa27.51■■□□□ 1.99
VSX1-206ENST00000444511 PARP10Q53GL7 1025 aa27.51■■□□□ 1.99
VSX1-206ENST00000444511 PPP1R42Q7Z4L9 355 aa27.51■■□□□ 1.99
VSX1-206ENST00000444511 NECTIN2Q92692 538 aa27.51■■□□□ 1.99
VSX1-206ENST00000444511 ZNF277Q9NRM2 450 aaPredicted RBP27.51■■□□□ 1.99
VSX1-206ENST00000444511 ADAMTS8Q9UP79 889 aa27.51■■□□□ 1.99
VSX1-206ENST00000444511 RIC1Q4ADV7 1423 aa27.5■■□□□ 1.99
VSX1-206ENST00000444511 CHL1O00533 1208 aa27.5■■□□□ 1.99
VSX1-206ENST00000444511 PRKRIP1Q9H875 184 aaPredicted RBP27.5■■□□□ 1.99
VSX1-206ENST00000444511 TRIM35Q9UPQ4 493 aa27.5■■□□□ 1.99
VSX1-206ENST00000444511 NTSR2O95665 410 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms