RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 IRS4O14654 1257 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 AIDAQ96BJ3 306 aa16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 TDO2P48775 406 aa16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 TRIM35Q9UPQ4 493 aa16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 THRAP3Q9Y2W1 955 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 SMARCA5O60264 1052 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 ATP2B2Q01814 1243 aa16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 PARP10Q53GL7 1025 aa16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 CNBD1Q8NA66 436 aa16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 PHAXQ9H814 394 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-204ENST00000444061 IL17REQ8NFR9 667 aa16.91■□□□□ 0.3
SMARCA4-204ENST00000444061 MAP3K12Q12852 859 aa16.91■□□□□ 0.3
SMARCA4-204ENST00000444061 FOXD4L5Q5VV16 416 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-204ENST00000444061 FOXD4L4Q8WXT5 416 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-204ENST00000444061 PTMAP06454 111 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-204ENST00000444061 HSPA1LP34931 641 aa16.91■□□□□ 0.3
SMARCA4-204ENST00000444061 CWF19L2Q2TBE0 894 aaKnown RBP16.91■□□□□ 0.3
SMARCA4-204ENST00000444061 PLBD2Q8NHP8 589 aa16.91■□□□□ 0.3
SMARCA4-204ENST00000444061 TRIM37O94972 964 aa16.9■□□□□ 0.3
SMARCA4-204ENST00000444061 TULP4Q9NRJ4 1543 aa16.9■□□□□ 0.3
SMARCA4-204ENST00000444061 TCEAL9Q9UHQ7 104 aa16.9■□□□□ 0.3
SMARCA4-204ENST00000444061 FAM182BQ5T319 152 aa16.9■□□□□ 0.3
SMARCA4-204ENST00000444061 SLF2Q8IX21 1173 aa16.89■□□□□ 0.29
SMARCA4-204ENST00000444061 STK11IPQ8N1F8 1099 aa16.89■□□□□ 0.29
SMARCA4-204ENST00000444061 CTNNA3Q9UI47 895 aa16.89■□□□□ 0.29
SMARCA4-204ENST00000444061 ATP6V1DQ9Y5K8 247 aa16.89■□□□□ 0.29
SMARCA4-204ENST00000444061 MADDQ8WXG6 1647 aa16.89■□□□□ 0.29
SMARCA4-204ENST00000444061 WWC3Q9ULE0 1092 aa16.89■□□□□ 0.29
SMARCA4-204ENST00000444061 EIF4A1P60842 406 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-204ENST00000444061 CDC42BPGQ6DT37 1551 aa16.88■□□□□ 0.29
SMARCA4-204ENST00000444061 PTMSP20962 102 aa16.88■□□□□ 0.29
SMARCA4-204ENST00000444061 CWC27Q6UX04 472 aaKnown RBP16.88■□□□□ 0.29
SMARCA4-204ENST00000444061 CCAR1Q8IX12 1150 aaKnown RBP16.88■□□□□ 0.29
SMARCA4-204ENST00000444061 FLAD1Q8NFF5 587 aa16.88■□□□□ 0.29
SMARCA4-204ENST00000444061 SH3TC1Q8TE82 1336 aa16.88■□□□□ 0.29
SMARCA4-204ENST00000444061 IPO9Q96P70 1041 aaKnown RBP16.87■□□□□ 0.29
SMARCA4-204ENST00000444061 SPATA31D1Q6ZQQ2 1576 aa16.87■□□□□ 0.29
SMARCA4-204ENST00000444061 LOC102724428A0A0B4J2F2 783 aa16.87■□□□□ 0.29
SMARCA4-204ENST00000444061 USP5P45974 858 aa16.87■□□□□ 0.29
SMARCA4-204ENST00000444061 SIK1P57059 783 aa16.87■□□□□ 0.29
SMARCA4-204ENST00000444061 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMARCA4-204ENST00000444061 NEXMIFQ5QGS0 1516 aa16.87■□□□□ 0.29
SMARCA4-204ENST00000444061 SMC3Q9UQE7 1217 aa16.87■□□□□ 0.29
SMARCA4-204ENST00000444061 LDHCP07864 332 aa16.86■□□□□ 0.29
SMARCA4-204ENST00000444061 NSFL1CQ9UNZ2 370 aaKnown RBP16.86■□□□□ 0.29
SMARCA4-204ENST00000444061 ECHDC1Q9NTX5 307 aa16.86■□□□□ 0.29
SMARCA4-204ENST00000444061 IL15P40933 162 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 RBM6P78332 1123 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 ATP2B3Q16720 1220 aa16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 METTL22Q9BUU2 404 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 FAM89AQ96GI7 184 aa16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 PREX1Q8TCU6 1659 aa16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 SPATA31A6Q5VVP1 1343 aa16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 FRMPD1Q5SYB0 1578 aa16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 G2E3Q7L622 706 aa16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 FER1L4A9Z1Z3 1794 aa16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 GOLGA6L6A8MZA4 724 aa16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 SYAP1Q96A49 352 aaPredicted RBP16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 ZC3H12CQ9C0D7 883 aaKnown RBP16.85■□□□□ 0.29
SMARCA4-204ENST00000444061 TRPM1Q7Z4N2 1603 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 UQCRFS1P1P0C7P4 283 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 SETBP1Q9Y6X0 1596 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 XBP1P17861 261 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 SNRKQ9NRH2 765 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 LAMC1P11047 1609 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 KCNQ3O43525 872 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 POLR3DP05423 398 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 ASAP1Q9ULH1 1129 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 BLMP54132 1417 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 GIGYF1O75420 1035 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 SLC4A3P48751 1232 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 NEK4P51957 841 aa16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 SPTY2D1Q68D10 685 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 CRACR2BQ8N4Y2 399 aaPredicted RBP16.84■□□□□ 0.29
SMARCA4-204ENST00000444061 ANO8Q9HCE9 1232 aaPredicted RBP16.83■□□□□ 0.29
SMARCA4-204ENST00000444061 TTF1Q15361 905 aaPredicted RBP16.83■□□□□ 0.28
SMARCA4-204ENST00000444061 RHPN1Q8TCX5 695 aa16.83■□□□□ 0.28
SMARCA4-204ENST00000444061 ATP8B2P98198 1209 aa16.83■□□□□ 0.28
SMARCA4-204ENST00000444061 ZNF287Q9HBT7 754 aa16.83■□□□□ 0.28
SMARCA4-204ENST00000444061 USP16Q9Y5T5 823 aa16.83■□□□□ 0.28
SMARCA4-204ENST00000444061 RBM17Q96I25 401 aaKnown RBP16.82■□□□□ 0.28
SMARCA4-204ENST00000444061 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
SMARCA4-204ENST00000444061 FOXD4L6Q3SYB3 417 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-204ENST00000444061 FOXD4L3Q6VB84 417 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-204ENST00000444061 JDP2Q8WYK2 163 aa16.82■□□□□ 0.28
SMARCA4-204ENST00000444061 VPS37CA5D8V6 355 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-204ENST00000444061 HCLS1P14317 486 aaPredicted RBP16.82■□□□□ 0.28
SMARCA4-204ENST00000444061 UBAC1Q9BSL1 405 aa16.81■□□□□ 0.28
SMARCA4-204ENST00000444061 BRMS1Q9HCU9 246 aa16.81■□□□□ 0.28
SMARCA4-204ENST00000444061 ANKRD44Q8N8A2 993 aa16.81■□□□□ 0.28
SMARCA4-204ENST00000444061 CYP46A1Q9Y6A2 500 aa16.81■□□□□ 0.28
SMARCA4-204ENST00000444061 GJD4Q96KN9 370 aaPredicted RBP16.81■□□□□ 0.28
SMARCA4-204ENST00000444061 NAPBQ9H115 298 aa16.81■□□□□ 0.28
SMARCA4-204ENST00000444061 DLC1Q96QB1 1528 aa16.81■□□□□ 0.28
SMARCA4-204ENST00000444061 GOLIM4O00461 696 aa16.81■□□□□ 0.28
SMARCA4-204ENST00000444061 NRDCO43847 1150 aa16.81■□□□□ 0.28
SMARCA4-204ENST00000444061 IMMTQ16891 758 aaKnown RBP16.81■□□□□ 0.28
SMARCA4-204ENST00000444061 EYA3Q99504 573 aa16.8■□□□□ 0.28
SMARCA4-204ENST00000444061 ANKRD2Q9GZV1 360 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms