RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 EAPPQ56P03 285 aaPredicted RBP20.05■□□□□ 0.8
MRPL40-202ENST00000443660 CAMTA2O94983 1202 aa20.04■□□□□ 0.8
MRPL40-202ENST00000443660 CCDC93Q567U6 631 aa20.04■□□□□ 0.8
MRPL40-202ENST00000443660 DZIP3Q86Y13 1208 aaKnown RBP20.04■□□□□ 0.8
MRPL40-202ENST00000443660 IL17REQ8NFR9 667 aa20.04■□□□□ 0.8
MRPL40-202ENST00000443660 GAS2L2Q8NHY3 880 aa20.04■□□□□ 0.8
MRPL40-202ENST00000443660 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
MRPL40-202ENST00000443660 ITGBL1O95965 494 aaPredicted RBP20.03■□□□□ 0.8
MRPL40-202ENST00000443660 NBPF5PQ86XG9 351 aaPredicted RBP20.03■□□□□ 0.8
MRPL40-202ENST00000443660 HACL1Q9UJ83 578 aa20.03■□□□□ 0.8
MRPL40-202ENST00000443660 NPR1P16066 1061 aa20.02■□□□□ 0.8
MRPL40-202ENST00000443660 PNMA8AQ86V59 439 aaPredicted RBP20.02■□□□□ 0.8
MRPL40-202ENST00000443660 WBP1LQ9NX94 342 aa20.02■□□□□ 0.8
MRPL40-202ENST00000443660 LBX1P52954 281 aa20.01■□□□□ 0.79
MRPL40-202ENST00000443660 FKBP4Q02790 459 aaKnown RBP eCLIP20.01■□□□□ 0.79
MRPL40-202ENST00000443660 DEFB115Q30KQ5 88 aa20.01■□□□□ 0.79
MRPL40-202ENST00000443660 CLEC4GQ6UXB4 293 aa20.01■□□□□ 0.79
MRPL40-202ENST00000443660 C7orf43Q8WVR3 580 aa20.01■□□□□ 0.79
MRPL40-202ENST00000443660 U2SURPO15042 1029 aaKnown RBP20■□□□□ 0.79
MRPL40-202ENST00000443660 EPHX2P34913 555 aa20■□□□□ 0.79
MRPL40-202ENST00000443660 TPTE2Q6XPS3 522 aa20■□□□□ 0.79
MRPL40-202ENST00000443660 RTKN2Q8IZC4 609 aa20■□□□□ 0.79
MRPL40-202ENST00000443660 PCGF6Q9BYE7 350 aa20■□□□□ 0.79
MRPL40-202ENST00000443660 ZNF652Q9Y2D9 606 aa20■□□□□ 0.79
MRPL40-202ENST00000443660 FER1L6Q2WGJ9 1857 aa20■□□□□ 0.79
MRPL40-202ENST00000443660 BTBD11A6QL63 1104 aa19.99■□□□□ 0.79
MRPL40-202ENST00000443660 CNTROBQ8N137 903 aa19.99■□□□□ 0.79
MRPL40-202ENST00000443660 ZNF277Q9NRM2 450 aaPredicted RBP19.99■□□□□ 0.79
MRPL40-202ENST00000443660 ANKRD31Q8N7Z5 1873 aa19.99■□□□□ 0.79
MRPL40-202ENST00000443660 DICER1Q9UPY3 1922 aaKnown RBP19.98■□□□□ 0.79
MRPL40-202ENST00000443660 MAP2K1Q02750 393 aaPredicted RBP19.98■□□□□ 0.79
MRPL40-202ENST00000443660 ALDH1B1P30837 517 aa19.97■□□□□ 0.79
MRPL40-202ENST00000443660 CC2D1BQ5T0F9 858 aaKnown RBP19.97■□□□□ 0.79
MRPL40-202ENST00000443660 USP16Q9Y5T5 823 aa19.97■□□□□ 0.79
MRPL40-202ENST00000443660 ZNF541Q9H0D2 1346 aa19.97■□□□□ 0.79
MRPL40-202ENST00000443660 UBR2Q8IWV8 1755 aa19.96■□□□□ 0.79
MRPL40-202ENST00000443660 RASSF10A6NK89 507 aa19.96■□□□□ 0.79
MRPL40-202ENST00000443660 MAP1SQ66K74 1059 aaPredicted RBP19.96■□□□□ 0.79
MRPL40-202ENST00000443660 ABT1Q9ULW3 272 aaKnown RBP19.96■□□□□ 0.79
MRPL40-202ENST00000443660 SLX4Q8IY92 1834 aa19.95■□□□□ 0.78
MRPL40-202ENST00000443660 KLRG2A4D1S0 409 aaPredicted RBP19.95■□□□□ 0.78
MRPL40-202ENST00000443660 JDP2Q8WYK2 163 aa19.95■□□□□ 0.78
MRPL40-202ENST00000443660 COL11A2P13942 1736 aaPredicted RBP19.95■□□□□ 0.78
MRPL40-202ENST00000443660 SCN7AQ01118 1682 aa19.94■□□□□ 0.78
MRPL40-202ENST00000443660 FZD9O00144 591 aa19.94■□□□□ 0.78
MRPL40-202ENST00000443660 KCNQ3O43525 872 aa19.94■□□□□ 0.78
MRPL40-202ENST00000443660 GTF2E1P29083 439 aaPredicted RBP19.94■□□□□ 0.78
MRPL40-202ENST00000443660 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
MRPL40-202ENST00000443660 PIP4K2AP48426 406 aaPredicted RBP19.94■□□□□ 0.78
MRPL40-202ENST00000443660 GPC2Q8N158 579 aa19.94■□□□□ 0.78
MRPL40-202ENST00000443660 SYNE4Q8N205 404 aa19.94■□□□□ 0.78
MRPL40-202ENST00000443660 ABHD8Q96I13 439 aa19.94■□□□□ 0.78
MRPL40-202ENST00000443660 NIP7Q9Y221 180 aaKnown RBP eCLIP19.94■□□□□ 0.78
MRPL40-202ENST00000443660 RNF123Q5XPI4 1314 aa19.94■□□□□ 0.78
MRPL40-202ENST00000443660 WDR33Q9C0J8 1336 aaKnown RBP19.94■□□□□ 0.78
MRPL40-202ENST00000443660 SCN4AP35499 1836 aa19.93■□□□□ 0.78
MRPL40-202ENST00000443660 SNRPA1P09661 255 aaKnown RBP19.93■□□□□ 0.78
MRPL40-202ENST00000443660 HSPA8P11142 646 aaKnown RBP19.93■□□□□ 0.78
MRPL40-202ENST00000443660 FAM177BA6PVY3 158 aa19.92■□□□□ 0.78
MRPL40-202ENST00000443660 OLFM4Q6UX06 510 aa19.92■□□□□ 0.78
MRPL40-202ENST00000443660 BEGAINQ9BUH8 593 aa19.92■□□□□ 0.78
MRPL40-202ENST00000443660 RGL2O15211 777 aa19.91■□□□□ 0.78
MRPL40-202ENST00000443660 PER1O15534 1290 aaPredicted RBP19.91■□□□□ 0.78
MRPL40-202ENST00000443660 EIF6P56537 245 aaKnown RBP19.91■□□□□ 0.78
MRPL40-202ENST00000443660 CEMIPQ8WUJ3 1361 aa19.91■□□□□ 0.78
MRPL40-202ENST00000443660 LMOD1P29536 600 aaPredicted RBP19.9■□□□□ 0.78
MRPL40-202ENST00000443660 DDX21Q9NR30 783 aaKnown RBP eCLIP19.9■□□□□ 0.78
MRPL40-202ENST00000443660 GJA3Q9Y6H8 435 aa19.9■□□□□ 0.78
MRPL40-202ENST00000443660 SLC34A2O95436 690 aa19.89■□□□□ 0.77
MRPL40-202ENST00000443660 ECE1P42892 770 aa19.89■□□□□ 0.77
MRPL40-202ENST00000443660 CNGB1Q14028 1251 aaPredicted RBP19.89■□□□□ 0.77
MRPL40-202ENST00000443660 KIF7Q2M1P5 1343 aa19.89■□□□□ 0.77
MRPL40-202ENST00000443660 FAM161AQ3B820 660 aa19.89■□□□□ 0.77
MRPL40-202ENST00000443660 VIRMAQ69YN4 1812 aaKnown RBP19.89■□□□□ 0.77
MRPL40-202ENST00000443660 PAXIP1Q6ZW49 1069 aaPredicted RBP19.89■□□□□ 0.77
MRPL40-202ENST00000443660 RTF1Q92541 710 aaKnown RBP19.89■□□□□ 0.77
MRPL40-202ENST00000443660 PSMD1Q99460 953 aa19.89■□□□□ 0.77
MRPL40-202ENST00000443660 PRAMEF22A3QJZ6 481 aa19.88■□□□□ 0.77
MRPL40-202ENST00000443660 CC2D2BQ6DHV5 1058 aa19.88■□□□□ 0.77
MRPL40-202ENST00000443660 PHACTR3Q96KR7 559 aa19.88■□□□□ 0.77
MRPL40-202ENST00000443660 PRKAR2BP31323 418 aa19.87■□□□□ 0.77
MRPL40-202ENST00000443660 CCDC85CA6NKD9 419 aa19.86■□□□□ 0.77
MRPL40-202ENST00000443660 GRM1Q13255 1194 aa19.86■□□□□ 0.77
MRPL40-202ENST00000443660 CAPNS2Q96L46 248 aa19.86■□□□□ 0.77
MRPL40-202ENST00000443660 GPR101Q96P66 508 aaPredicted RBP19.86■□□□□ 0.77
MRPL40-202ENST00000443660 NYXQ9GZU5 481 aa19.86■□□□□ 0.77
MRPL40-202ENST00000443660 NBPF26B4DH59 902 aa19.85■□□□□ 0.77
MRPL40-202ENST00000443660 MLLT1Q03111 559 aaPredicted RBP19.85■□□□□ 0.77
MRPL40-202ENST00000443660 GRIPAP1Q4V328 841 aa19.85■□□□□ 0.77
MRPL40-202ENST00000443660 NBPF10Q6P3W6 841 aaKnown RBP19.85■□□□□ 0.77
MRPL40-202ENST00000443660 NBPF15Q8N660 670 aa19.85■□□□□ 0.77
MRPL40-202ENST00000443660 CFAP53Q96M91 514 aa19.85■□□□□ 0.77
MRPL40-202ENST00000443660 ARFGEF2Q9Y6D5 1785 aa19.85■□□□□ 0.77
MRPL40-202ENST00000443660 HLFQ16534 295 aa19.84■□□□□ 0.77
MRPL40-202ENST00000443660 LARGE2Q8N3Y3 721 aa19.84■□□□□ 0.77
MRPL40-202ENST00000443660 RPGRQ92834 1020 aaKnown RBP19.84■□□□□ 0.77
MRPL40-202ENST00000443660 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
MRPL40-202ENST00000443660 CACNA1SQ13698 1873 aa19.84■□□□□ 0.77
MRPL40-202ENST00000443660 USP50Q70EL3 339 aaPredicted RBP19.83■□□□□ 0.77
MRPL40-202ENST00000443660 MCM10Q7L590 875 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms