RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 C16orf71Q8IYS4 520 aaPredicted RBP23.31■■□□□ 1.32
POLR1E-203ENST00000442009 MYD88Q99836 296 aa23.31■■□□□ 1.32
POLR1E-203ENST00000442009 EXOC6BQ9Y2D4 811 aa23.31■■□□□ 1.32
POLR1E-203ENST00000442009 TTLL7Q6ZT98 887 aa23.3■■□□□ 1.32
POLR1E-203ENST00000442009 AFDNP55196 1824 aaKnown RBP23.3■■□□□ 1.32
POLR1E-203ENST00000442009 SMARCA5O60264 1052 aaPredicted RBP23.29■■□□□ 1.32
POLR1E-203ENST00000442009 SRGAP3O43295 1099 aa23.29■■□□□ 1.32
POLR1E-203ENST00000442009 FAM98CQ17RN3 349 aaKnown RBP23.29■■□□□ 1.32
POLR1E-203ENST00000442009 TJP1Q07157 1748 aa23.28■■□□□ 1.32
POLR1E-203ENST00000442009 STARD3NLO95772 234 aa23.28■■□□□ 1.32
POLR1E-203ENST00000442009 ANP32AP39687 249 aaKnown RBP23.28■■□□□ 1.32
POLR1E-203ENST00000442009 OTUD7AQ8TE49 926 aaPredicted RBP23.28■■□□□ 1.32
POLR1E-203ENST00000442009 RBM42Q9BTD8 480 aaKnown RBP23.28■■□□□ 1.32
POLR1E-203ENST00000442009 USP21Q9UK80 565 aa23.28■■□□□ 1.32
POLR1E-203ENST00000442009 COL15A1P39059 1388 aa23.28■■□□□ 1.32
POLR1E-203ENST00000442009 CYP19A1P11511 503 aaPredicted RBP23.27■■□□□ 1.32
POLR1E-203ENST00000442009 SYTL4Q96C24 671 aaPredicted RBP23.27■■□□□ 1.32
POLR1E-203ENST00000442009 SUCLG2Q96I99 432 aa23.27■■□□□ 1.32
POLR1E-203ENST00000442009 ZBTB47Q9UFB7 747 aaPredicted RBP23.27■■□□□ 1.32
POLR1E-203ENST00000442009 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.32
POLR1E-203ENST00000442009 SALL3Q9BXA9 1300 aa23.27■■□□□ 1.32
POLR1E-203ENST00000442009 LRRCC1Q9C099 1032 aa23.26■■□□□ 1.31
POLR1E-203ENST00000442009 THSD7AQ9UPZ6 1657 aa23.26■■□□□ 1.31
POLR1E-203ENST00000442009 APBB1O00213 710 aa23.26■■□□□ 1.31
POLR1E-203ENST00000442009 OSBPL3Q9H4L5 887 aa23.26■■□□□ 1.31
POLR1E-203ENST00000442009 CICQ96RK0 1608 aaPredicted RBP23.25■■□□□ 1.31
POLR1E-203ENST00000442009 RAB11FIP3O75154 756 aa23.25■■□□□ 1.31
POLR1E-203ENST00000442009 CASP7P55210 303 aa23.24■■□□□ 1.31
POLR1E-203ENST00000442009 GSPT1P15170 499 aaKnown RBP23.24■■□□□ 1.31
POLR1E-203ENST00000442009 SURF6O75683 361 aaKnown RBP23.23■■□□□ 1.31
POLR1E-203ENST00000442009 TTC22Q5TAA0 569 aa23.23■■□□□ 1.31
POLR1E-203ENST00000442009 NPM2Q86SE8 214 aaKnown RBP23.23■■□□□ 1.31
POLR1E-203ENST00000442009 BICC1Q9H694 974 aaKnown RBP23.23■■□□□ 1.31
POLR1E-203ENST00000442009 ATP5J2-PTCD1G3V325 749 aa23.22■■□□□ 1.31
POLR1E-203ENST00000442009 MSH5O43196 834 aa23.22■■□□□ 1.31
POLR1E-203ENST00000442009 ACSBG1Q96GR2 724 aa23.22■■□□□ 1.31
POLR1E-203ENST00000442009 IPO9Q96P70 1041 aaKnown RBP23.22■■□□□ 1.31
POLR1E-203ENST00000442009 H7C1W4 665 aa23.22■■□□□ 1.31
POLR1E-203ENST00000442009 EPHA10Q5JZY3 1008 aa23.21■■□□□ 1.31
POLR1E-203ENST00000442009 PDE1AP54750 535 aa23.2■■□□□ 1.3
POLR1E-203ENST00000442009 HSP90AB4PQ58FF6 505 aa23.2■■□□□ 1.3
POLR1E-203ENST00000442009 ISCA1Q9BUE6 129 aa23.2■■□□□ 1.3
POLR1E-203ENST00000442009 ZBTB3Q9H5J0 574 aa23.2■■□□□ 1.3
POLR1E-203ENST00000442009 TRIM28Q13263 835 aaKnown RBP23.19■■□□□ 1.3
POLR1E-203ENST00000442009 RABL6Q3YEC7 729 aaPredicted RBP23.19■■□□□ 1.3
POLR1E-203ENST00000442009 CCDC191Q8NCU4 936 aa23.19■■□□□ 1.3
POLR1E-203ENST00000442009 STAP2Q9UGK3 403 aa23.19■■□□□ 1.3
POLR1E-203ENST00000442009 ZNF831Q5JPB2 1677 aa23.19■■□□□ 1.3
POLR1E-203ENST00000442009 TUBGCP6Q96RT7 1819 aa23.19■■□□□ 1.3
POLR1E-203ENST00000442009 A0A087WZG4 1122 aa23.19■■□□□ 1.3
POLR1E-203ENST00000442009 KCNQ2O43526 872 aa23.19■■□□□ 1.3
POLR1E-203ENST00000442009 ONECUT3O60422 494 aaPredicted RBP23.19■■□□□ 1.3
POLR1E-203ENST00000442009 RHPN1Q8TCX5 695 aa23.19■■□□□ 1.3
POLR1E-203ENST00000442009 RREB1Q92766 1687 aa23.19■■□□□ 1.3
POLR1E-203ENST00000442009 TCIRG1Q13488 830 aa23.18■■□□□ 1.3
POLR1E-203ENST00000442009 KIF1BPQ96EK5 621 aa23.18■■□□□ 1.3
POLR1E-203ENST00000442009 GJD4Q96KN9 370 aaPredicted RBP23.18■■□□□ 1.3
POLR1E-203ENST00000442009 UBE3BQ7Z3V4 1068 aa23.17■■□□□ 1.3
POLR1E-203ENST00000442009 CWC25Q9NXE8 425 aaPredicted RBP23.17■■□□□ 1.3
POLR1E-203ENST00000442009 ZBTB1Q9Y2K1 713 aa23.17■■□□□ 1.3
POLR1E-203ENST00000442009 ATRNO75882 1429 aa23.17■■□□□ 1.3
POLR1E-203ENST00000442009 LOC102724428A0A0B4J2F2 783 aa23.17■■□□□ 1.3
POLR1E-203ENST00000442009 SIK1P57059 783 aa23.17■■□□□ 1.3
POLR1E-203ENST00000442009 AFF2P51816 1311 aa23.17■■□□□ 1.3
POLR1E-203ENST00000442009 IL6STP40189 918 aaPredicted RBP23.16■■□□□ 1.3
POLR1E-203ENST00000442009 MAP3K15Q6ZN16 1313 aa23.16■■□□□ 1.3
POLR1E-203ENST00000442009 PALLDQ8WX93 1383 aa23.15■■□□□ 1.3
POLR1E-203ENST00000442009 MEX3CQ5U5Q3 659 aaKnown RBP23.15■■□□□ 1.3
POLR1E-203ENST00000442009 INTS5Q6P9B9 1019 aaKnown RBP23.15■■□□□ 1.3
POLR1E-203ENST00000442009 JARID2Q92833 1246 aaPredicted RBP23.15■■□□□ 1.3
POLR1E-203ENST00000442009 SMARCC1Q92922 1105 aaPredicted RBP23.15■■□□□ 1.3
POLR1E-203ENST00000442009 TBC1D32Q96NH3 1257 aa23.15■■□□□ 1.3
POLR1E-203ENST00000442009 MYH14Q7Z406 1995 aaKnown RBP23.15■■□□□ 1.3
POLR1E-203ENST00000442009 MX1P20591 662 aa23.15■■□□□ 1.3
POLR1E-203ENST00000442009 RFX5P48382 616 aaPredicted RBP23.14■■□□□ 1.29
POLR1E-203ENST00000442009 ITPK1Q13572 414 aa23.14■■□□□ 1.29
POLR1E-203ENST00000442009 GIGYF2Q6Y7W6 1299 aaKnown RBP23.14■■□□□ 1.29
POLR1E-203ENST00000442009 KIF6Q6ZMV9 814 aa23.14■■□□□ 1.29
POLR1E-203ENST00000442009 TBC1D9Q6ZT07 1266 aa23.14■■□□□ 1.29
POLR1E-203ENST00000442009 IL1RAPL2Q9NP60 686 aa23.14■■□□□ 1.29
POLR1E-203ENST00000442009 PA2G4Q9UQ80 394 aaKnown RBP23.14■■□□□ 1.29
POLR1E-203ENST00000442009 AOX1Q06278 1338 aa23.13■■□□□ 1.29
POLR1E-203ENST00000442009 SDSP20132 328 aa23.13■■□□□ 1.29
POLR1E-203ENST00000442009 EIF5P55010 431 aaKnown RBP23.13■■□□□ 1.29
POLR1E-203ENST00000442009 FOXO4P98177 505 aa23.13■■□□□ 1.29
POLR1E-203ENST00000442009 NUP98P52948 1817 aa23.13■■□□□ 1.29
POLR1E-203ENST00000442009 ATP6V1AP38606 617 aa23.12■■□□□ 1.29
POLR1E-203ENST00000442009 BCL11AQ9H165 835 aa23.12■■□□□ 1.29
POLR1E-203ENST00000442009 COPRSQ9NQ92 184 aa23.12■■□□□ 1.29
POLR1E-203ENST00000442009 COL5A3P25940 1745 aaPredicted RBP23.12■■□□□ 1.29
POLR1E-203ENST00000442009 CDC45O75419 566 aa23.12■■□□□ 1.29
POLR1E-203ENST00000442009 ERC1Q8IUD2 1116 aa23.12■■□□□ 1.29
POLR1E-203ENST00000442009 UPF2Q9HAU5 1272 aaKnown RBP23.12■■□□□ 1.29
POLR1E-203ENST00000442009 ANKRD36CQ5JPF3 1778 aa23.11■■□□□ 1.29
POLR1E-203ENST00000442009 ERVV-1B6SEH8 477 aa23.11■■□□□ 1.29
POLR1E-203ENST00000442009 CCDC87Q9NVE4 849 aa23.11■■□□□ 1.29
POLR1E-203ENST00000442009 TRPC5Q9UL62 973 aaPredicted RBP23.11■■□□□ 1.29
POLR1E-203ENST00000442009 ZNF330Q9Y3S2 320 aaPredicted RBP23.11■■□□□ 1.29
POLR1E-203ENST00000442009 HLFQ16534 295 aa23.1■■□□□ 1.29
POLR1E-203ENST00000442009 NHSQ6T4R5 1651 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms