RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 MRPL42Q9Y6G3 142 aaKnown RBP7.48□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 CFTRP13569 1480 aa7.47□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 PAX3P23760 479 aa7.47□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 RACK1P63244 317 aaKnown RBP7.47□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ENOX2Q16206 610 aaKnown RBP7.47□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 MCF2L2Q86YR7 1114 aa7.47□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 SPOCK3Q9BQ16 436 aa7.47□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.47□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 RPS6KL1Q9Y6S9 549 aa7.47□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ESPNB1AK53 854 aa7.46□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 LIG1P18858 919 aa7.46□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 CASC1Q6TDU7 716 aa7.46□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 CHMP7Q8WUX9 453 aaPredicted RBP7.46□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 MRFAP1L1Q96HT8 127 aa7.46□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 BRINP2Q9C0B6 783 aa7.46□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 SAP130Q9H0E3 1048 aa7.46□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 ZNF358Q9NW07 568 aa7.46□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 STIM2Q9P246 746 aa7.46□□□□□ -1.21
ALMS1-IT1-201ENST00000441587 EIF3JO75822 258 aaKnown RBP7.46□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 THAP11Q96EK4 314 aa7.46□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 CLIP1P30622 1438 aa7.46□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 PRDM2Q13029 1718 aa7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 CCDC194A0A1B0GVG4 234 aa7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 KIF4AO95239 1232 aa7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 MYCP01106 439 aaPredicted RBP7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 PSEN2P49810 448 aa7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 CNGB1Q14028 1251 aaPredicted RBP7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 PMM1Q92871 262 aa7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 ATAD2Q6PL18 1390 aa7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 ZBTB24O43167 697 aaPredicted RBP7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 PARNO95453 639 aaKnown RBP7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 HS2ST1Q7LGA3 356 aa7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 LAPTM4BQ86VI4 370 aa7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 AK5Q9Y6K8 562 aa7.45□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 CUX1P39880 1505 aa7.44□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 RAPGEF2Q9Y4G8 1499 aa7.44□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 GABBR2O75899 941 aa7.44□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 FGRP09769 529 aa7.44□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 C11orf95C9JLR9 678 aaPredicted RBP7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 NR1I2O75469 434 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 DXOO77932 396 aaKnown RBP7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 CTSHP09668 335 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 SLC10A4Q96EP9 437 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 SLC4A5Q9BY07 1137 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 TTC36A6NLP5 189 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 APLP1P51693 650 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 AGERQ15109 404 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 SH3RF1Q7Z6J0 888 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 CKAP2LQ8IYA6 745 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 SDR16C5Q8N3Y7 309 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 FBF1Q8TES7 1133 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 FRMD6Q96NE9 622 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 UNC93B1Q9H1C4 597 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 COL4A3BPQ9Y5P4 624 aa7.43□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 ERICH3Q5RHP9 1530 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 K7ELQ4 463 aaPredicted RBP7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 BACH1O14867 736 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 U2SURPO15042 1029 aaKnown RBP7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 XRCC5P13010 732 aaKnown RBP7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 ERFEQ4G0M1 354 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 HSP90AB2PQ58FF8 381 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 AXDND1Q5T1B0 1012 aaPredicted RBP7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 CLEC4GQ6UXB4 293 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 FILIP1Q7Z7B0 1213 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 SEPT12Q8IYM1 358 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 TNS4Q8IZW8 715 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 ABTB2Q8N961 1025 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 ZFRQ96KR1 1074 aaKnown RBP7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 SRA1Q9HD15 236 aaKnown RBP7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 GGT7Q9UJ14 662 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 KIF27Q86VH2 1401 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 ATF4P18848 351 aaPredicted RBP7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 MSS51Q4VC12 460 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 NBPF11Q86T75 865 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 MAF1Q9H063 256 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 NBPF3Q9H094 633 aa7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 ESF1Q9H501 851 aaKnown RBP7.42□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 VPS8Q8N3P4 1428 aa7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 TMEM229AB2RXF0 380 aa7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 EXOC5O00471 708 aa7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 USP5P45974 858 aa7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 COX20Q5RI15 118 aa7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 BPHLQ86WA6 291 aaPredicted RBP7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 TSPAN10Q9H1Z9 355 aaPredicted RBP7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 IFT57Q9NWB7 429 aa7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 SPG7Q9UQ90 795 aa7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 CC2D2AQ9P2K1 1620 aa7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 PRXQ9BXM0 1461 aa7.41□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 NRDCO43847 1150 aa7.4□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 GJA8P48165 433 aa7.4□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 PTPN12Q05209 780 aaKnown RBP7.4□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 CXorf38Q8TB03 319 aa7.4□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 LRCH3Q96II8 777 aa7.4□□□□□ -1.22
ALMS1-IT1-201ENST00000441587 TNFRSF10BO14763 440 aa7.4□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 WDHD1O75717 1129 aaPredicted RBP7.4□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 EIF4BP23588 611 aaKnown RBP7.4□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 NBPF1Q3BBV0 1214 aa7.4□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 PCDH12Q9NPG4 1184 aa7.4□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 POLIQ9UNA4 740 aa7.4□□□□□ -1.23
ALMS1-IT1-201ENST00000441587 FAN1Q9Y2M0 1017 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms