RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 ATP8B2P98198 1209 aa24.2■■□□□ 1.46
SHOX2-203ENST00000441443 DRC7Q8IY82 874 aa24.2■■□□□ 1.46
SHOX2-203ENST00000441443 LRRFIP2Q9Y608 721 aaKnown RBP24.2■■□□□ 1.46
SHOX2-203ENST00000441443 C3P01024 1663 aa24.2■■□□□ 1.46
SHOX2-203ENST00000441443 FEZ1Q99689 392 aa24.2■■□□□ 1.46
SHOX2-203ENST00000441443 OGFRQ9NZT2 677 aa24.19■■□□□ 1.46
SHOX2-203ENST00000441443 MTMR6Q9Y217 621 aa24.19■■□□□ 1.46
SHOX2-203ENST00000441443 SPG7Q9UQ90 795 aa24.19■■□□□ 1.46
SHOX2-203ENST00000441443 RAD50Q92878 1312 aa24.18■■□□□ 1.46
SHOX2-203ENST00000441443 CASTP20810 708 aaKnown RBP24.18■■□□□ 1.46
SHOX2-203ENST00000441443 CGNQ9P2M7 1197 aaKnown RBP24.18■■□□□ 1.46
SHOX2-203ENST00000441443 FGD1P98174 961 aa24.18■■□□□ 1.46
SHOX2-203ENST00000441443 CKAP2LQ8IYA6 745 aa24.17■■□□□ 1.46
SHOX2-203ENST00000441443 FAM200AQ8TCP9 573 aa24.17■■□□□ 1.46
SHOX2-203ENST00000441443 DDX54Q8TDD1 881 aaKnown RBP24.17■■□□□ 1.46
SHOX2-203ENST00000441443 CTNNA3Q9UI47 895 aa24.17■■□□□ 1.46
SHOX2-203ENST00000441443 SGSM2O43147 1006 aa24.17■■□□□ 1.46
SHOX2-203ENST00000441443 TNNT1P13805 278 aa24.16■■□□□ 1.46
SHOX2-203ENST00000441443 FAM173BQ6P4H8 233 aa24.16■■□□□ 1.46
SHOX2-203ENST00000441443 CWC27Q6UX04 472 aaKnown RBP24.16■■□□□ 1.46
SHOX2-203ENST00000441443 TUBGCP6Q96RT7 1819 aa24.16■■□□□ 1.46
SHOX2-203ENST00000441443 GNAI3P08754 354 aa24.16■■□□□ 1.46
SHOX2-203ENST00000441443 MRVI1Q9Y6F6 885 aa24.16■■□□□ 1.46
SHOX2-203ENST00000441443 AKAP12Q02952 1782 aa24.16■■□□□ 1.46
SHOX2-203ENST00000441443 LSG1Q9H089 658 aaKnown RBP24.16■■□□□ 1.46
SHOX2-203ENST00000441443 LIG1P18858 919 aa24.15■■□□□ 1.46
SHOX2-203ENST00000441443 FERMT3Q86UX7 667 aa24.15■■□□□ 1.46
SHOX2-203ENST00000441443 TYRO3Q06418 890 aa24.15■■□□□ 1.46
SHOX2-203ENST00000441443 LMOD2Q6P5Q4 547 aa24.15■■□□□ 1.46
SHOX2-203ENST00000441443 TTC21AQ8NDW8 1320 aa24.14■■□□□ 1.46
SHOX2-203ENST00000441443 BBXQ8WY36 941 aaPredicted RBP24.14■■□□□ 1.46
SHOX2-203ENST00000441443 FLT4P35916 1363 aa24.14■■□□□ 1.46
SHOX2-203ENST00000441443 MAP3K11Q16584 847 aa24.14■■□□□ 1.45
SHOX2-203ENST00000441443 STK31Q9BXU1 1019 aa24.14■■□□□ 1.45
SHOX2-203ENST00000441443 FLIIQ13045 1269 aa24.13■■□□□ 1.45
SHOX2-203ENST00000441443 TTC6Q86TZ1 520 aa24.13■■□□□ 1.45
SHOX2-203ENST00000441443 HYPKQ9NX55 129 aa24.13■■□□□ 1.45
SHOX2-203ENST00000441443 SMTNL1A8MU46 457 aa24.13■■□□□ 1.45
SHOX2-203ENST00000441443 ZNF592Q92610 1267 aa24.13■■□□□ 1.45
SHOX2-203ENST00000441443 TRIM5Q9C035 493 aa24.13■■□□□ 1.45
SHOX2-203ENST00000441443 NUP62CLQ9H1M0 184 aa24.13■■□□□ 1.45
SHOX2-203ENST00000441443 CRB1P82279 1406 aa24.13■■□□□ 1.45
SHOX2-203ENST00000441443 NECAB1Q8N987 351 aa24.13■■□□□ 1.45
SHOX2-203ENST00000441443 ANO6Q4KMQ2 910 aa24.12■■□□□ 1.45
SHOX2-203ENST00000441443 ADCK5Q3MIX3 580 aa24.12■■□□□ 1.45
SHOX2-203ENST00000441443 CBX8Q9HC52 389 aa24.12■■□□□ 1.45
SHOX2-203ENST00000441443 SURF6O75683 361 aaKnown RBP24.11■■□□□ 1.45
SHOX2-203ENST00000441443 ZSCAN25Q6NSZ9 544 aa24.11■■□□□ 1.45
SHOX2-203ENST00000441443 CCDC112Q8NEF3 446 aa24.11■■□□□ 1.45
SHOX2-203ENST00000441443 PI4K2BQ8TCG2 481 aa24.11■■□□□ 1.45
SHOX2-203ENST00000441443 JAKMIP1Q96N16 626 aaKnown RBP24.1■■□□□ 1.45
SHOX2-203ENST00000441443 SBNO1A3KN83 1393 aa24.1■■□□□ 1.45
SHOX2-203ENST00000441443 USP31Q70CQ4 1352 aa24.1■■□□□ 1.45
SHOX2-203ENST00000441443 TPD52L1Q16890 204 aaPredicted RBP24.1■■□□□ 1.45
SHOX2-203ENST00000441443 DDX41Q9UJV9 622 aaKnown RBP24.1■■□□□ 1.45
SHOX2-203ENST00000441443 PEAK1Q9H792 1746 aa24.1■■□□□ 1.45
SHOX2-203ENST00000441443 ZBTB22O15209 634 aa24.1■■□□□ 1.45
SHOX2-203ENST00000441443 PDRG1Q9NUG6 133 aa24.1■■□□□ 1.45
SHOX2-203ENST00000441443 EPB41L2O43491 1005 aaKnown RBP24.09■■□□□ 1.45
SHOX2-203ENST00000441443 HOXC9P31274 260 aa24.09■■□□□ 1.45
SHOX2-203ENST00000441443 SETD1BQ9UPS6 1966 aaKnown RBP24.09■■□□□ 1.45
SHOX2-203ENST00000441443 ST3GAL1Q11201 340 aa24.09■■□□□ 1.45
SHOX2-203ENST00000441443 TNMDQ9H2S6 317 aa24.09■■□□□ 1.45
SHOX2-203ENST00000441443 DACT1Q9NYF0 836 aa24.09■■□□□ 1.45
SHOX2-203ENST00000441443 RGPD8O14715 1765 aaPredicted RBP24.09■■□□□ 1.45
SHOX2-203ENST00000441443 ESCO1Q5FWF5 840 aa24.08■■□□□ 1.45
SHOX2-203ENST00000441443 USP44Q9H0E7 712 aa24.08■■□□□ 1.45
SHOX2-203ENST00000441443 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.08■■□□□ 1.45
SHOX2-203ENST00000441443 V9GYY5 206 aaPredicted RBP24.08■■□□□ 1.45
SHOX2-203ENST00000441443 SOS1Q07889 1333 aaPredicted RBP24.08■■□□□ 1.45
SHOX2-203ENST00000441443 SLFN14P0C7P3 912 aa24.08■■□□□ 1.44
SHOX2-203ENST00000441443 AOX1Q06278 1338 aa24.08■■□□□ 1.44
SHOX2-203ENST00000441443 PRPF40BQ6NWY9 871 aaKnown RBP24.08■■□□□ 1.44
SHOX2-203ENST00000441443 CACTINQ8WUQ7 758 aaKnown RBP24.08■■□□□ 1.44
SHOX2-203ENST00000441443 RIMS1Q86UR5 1692 aaKnown RBP24.07■■□□□ 1.44
SHOX2-203ENST00000441443 UBTFL1P0CB47 393 aaPredicted RBP24.07■■□□□ 1.44
SHOX2-203ENST00000441443 GTF2E1P29083 439 aaPredicted RBP24.07■■□□□ 1.44
SHOX2-203ENST00000441443 ZNF75DP51815 510 aa24.07■■□□□ 1.44
SHOX2-203ENST00000441443 PTH1RQ03431 593 aa24.07■■□□□ 1.44
SHOX2-203ENST00000441443 ME3Q16798 604 aa24.07■■□□□ 1.44
SHOX2-203ENST00000441443 LARP1BQ659C4 914 aaKnown RBP24.07■■□□□ 1.44
SHOX2-203ENST00000441443 CDC37L1Q7L3B6 337 aa24.07■■□□□ 1.44
SHOX2-203ENST00000441443 KRT85P78386 507 aa24.07■■□□□ 1.44
SHOX2-203ENST00000441443 TFIP11Q9UBB9 837 aaKnown RBP24.07■■□□□ 1.44
SHOX2-203ENST00000441443 CNTROBQ8N137 903 aa24.06■■□□□ 1.44
SHOX2-203ENST00000441443 GABPB1Q06547 395 aaPredicted RBP24.06■■□□□ 1.44
SHOX2-203ENST00000441443 SYCP1Q15431 976 aa24.06■■□□□ 1.44
SHOX2-203ENST00000441443 PPP1R42Q7Z4L9 355 aa24.06■■□□□ 1.44
SHOX2-203ENST00000441443 RHPN1Q8TCX5 695 aa24.06■■□□□ 1.44
SHOX2-203ENST00000441443 CCDC144BQ3MJ40 725 aa24.05■■□□□ 1.44
SHOX2-203ENST00000441443 CCDC144CPQ8IYA2 1237 aa24.05■■□□□ 1.44
SHOX2-203ENST00000441443 KIF18AQ8NI77 898 aa24.05■■□□□ 1.44
SHOX2-203ENST00000441443 PHF8Q9UPP1 1060 aa24.05■■□□□ 1.44
SHOX2-203ENST00000441443 DIP2AQ14689 1571 aa24.05■■□□□ 1.44
SHOX2-203ENST00000441443 GNAT3A8MTJ3 354 aa24.05■■□□□ 1.44
SHOX2-203ENST00000441443 PSME1Q06323 249 aa24.05■■□□□ 1.44
SHOX2-203ENST00000441443 PAXBP1Q9Y5B6 917 aa24.05■■□□□ 1.44
SHOX2-203ENST00000441443 ARHGEF10O15013 1369 aa24.05■■□□□ 1.44
SHOX2-203ENST00000441443 CLIP2Q9UDT6 1046 aa24.05■■□□□ 1.44
SHOX2-203ENST00000441443 IGSF1Q8N6C5 1336 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms