RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 ANAPC4Q9UJX5 808 aa8.73□□□□□ -1.01
TSC1-203ENST00000440111 IBSPP21815 317 aaPredicted RBP8.73□□□□□ -1.01
TSC1-203ENST00000440111 SMC3Q9UQE7 1217 aa8.73□□□□□ -1.01
TSC1-203ENST00000440111 GMNNO75496 209 aa8.73□□□□□ -1.01
TSC1-203ENST00000440111 CETN1Q12798 172 aa8.73□□□□□ -1.01
TSC1-203ENST00000440111 HOXB7P09629 217 aa8.73□□□□□ -1.01
TSC1-203ENST00000440111 GTF2A1P52655 376 aaPredicted RBP8.73□□□□□ -1.01
TSC1-203ENST00000440111 CEP57L1Q8IYX8 460 aa8.73□□□□□ -1.01
TSC1-203ENST00000440111 CCDC96Q2M329 555 aa8.72□□□□□ -1.01
TSC1-203ENST00000440111 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.72□□□□□ -1.01
TSC1-203ENST00000440111 MAP3K4Q9Y6R4 1608 aa8.72□□□□□ -1.01
TSC1-203ENST00000440111 CABP2Q9NPB3 220 aa8.72□□□□□ -1.01
TSC1-203ENST00000440111 SPECC1LQ69YQ0 1117 aa8.72□□□□□ -1.01
TSC1-203ENST00000440111 PLVAPQ9BX97 442 aa8.72□□□□□ -1.01
TSC1-203ENST00000440111 GON4LQ3T8J9 2241 aa8.72□□□□□ -1.01
TSC1-203ENST00000440111 ZCCHC11Q5TAX3 1644 aaKnown RBP8.72□□□□□ -1.01
TSC1-203ENST00000440111 KIF5CO60282 957 aa8.72□□□□□ -1.01
TSC1-203ENST00000440111 CDKL5O76039 1030 aa8.72□□□□□ -1.01
TSC1-203ENST00000440111 RRP7AQ9Y3A4 280 aaKnown RBP8.72□□□□□ -1.01
TSC1-203ENST00000440111 ARHGEF40Q8TER5 1519 aa8.72□□□□□ -1.01
TSC1-203ENST00000440111 UGGT1Q9NYU2 1555 aa8.72□□□□□ -1.01
TSC1-203ENST00000440111 C8orf34Q49A92 452 aa8.71□□□□□ -1.01
TSC1-203ENST00000440111 SPATA32Q96LK8 384 aa8.71□□□□□ -1.01
TSC1-203ENST00000440111 TMOD2Q9NZR1 351 aa8.71□□□□□ -1.01
TSC1-203ENST00000440111 ABCC3O15438 1527 aa8.71□□□□□ -1.01
TSC1-203ENST00000440111 KIF20AO95235 890 aa8.71□□□□□ -1.01
TSC1-203ENST00000440111 MCM4P33991 863 aa8.71□□□□□ -1.01
TSC1-203ENST00000440111 SNX16P57768 344 aa8.71□□□□□ -1.01
TSC1-203ENST00000440111 NACAP1Q9BZK3 213 aa8.71□□□□□ -1.01
TSC1-203ENST00000440111 CFAP45Q9UL16 551 aa8.71□□□□□ -1.01
TSC1-203ENST00000440111 KCNH5Q8NCM2 988 aa8.71□□□□□ -1.02
TSC1-203ENST00000440111 GGNBP2Q9H3C7 697 aa8.71□□□□□ -1.02
TSC1-203ENST00000440111 FSD2A1L4K1 749 aa8.71□□□□□ -1.02
TSC1-203ENST00000440111 GNAI2P04899 355 aa8.71□□□□□ -1.02
TSC1-203ENST00000440111 ANKRD1Q15327 319 aa8.71□□□□□ -1.02
TSC1-203ENST00000440111 SWAP70Q9UH65 585 aa8.71□□□□□ -1.02
TSC1-203ENST00000440111 IKBKGQ9Y6K9 419 aa8.71□□□□□ -1.02
TSC1-203ENST00000440111 MSH6P52701 1360 aa8.71□□□□□ -1.02
TSC1-203ENST00000440111 KIF4BQ2VIQ3 1234 aa8.71□□□□□ -1.02
TSC1-203ENST00000440111 SAMD1Q6SPF0 538 aaPredicted RBP8.71□□□□□ -1.02
TSC1-203ENST00000440111 BCAR3O75815 825 aa8.71□□□□□ -1.02
TSC1-203ENST00000440111 CCDC117Q8IWD4 279 aaPredicted RBP8.71□□□□□ -1.02
TSC1-203ENST00000440111 NAP1L3Q99457 506 aaPredicted RBP8.71□□□□□ -1.02
TSC1-203ENST00000440111 NOL7Q9UMY1 257 aaKnown RBP8.71□□□□□ -1.02
TSC1-203ENST00000440111 ACTN2P35609 894 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 SPC25Q9HBM1 224 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 SSH2Q76I76 1423 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 TNRQ92752 1358 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 PPFIA2O75334 1257 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 KIF6Q6ZMV9 814 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 GABPB2Q8TAK5 448 aaPredicted RBP8.7□□□□□ -1.02
TSC1-203ENST00000440111 RAB3IPQ96QF0 476 aaPredicted RBP8.7□□□□□ -1.02
TSC1-203ENST00000440111 USP32Q8NFA0 1604 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 NUCB1Q02818 461 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 CASTP20810 708 aaKnown RBP8.7□□□□□ -1.02
TSC1-203ENST00000440111 CCDC148Q8NFR7 591 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 CCDC110Q8TBZ0 833 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 NOB1Q9ULX3 412 aaKnown RBP8.7□□□□□ -1.02
TSC1-203ENST00000440111 AGLP35573 1532 aa8.7□□□□□ -1.02
TSC1-203ENST00000440111 WDR33Q9C0J8 1336 aaKnown RBP8.7□□□□□ -1.02
TSC1-203ENST00000440111 CPSF1Q10570 1443 aaKnown RBP8.7□□□□□ -1.02
TSC1-203ENST00000440111 GSTTP1A0A1W2PQM5 241 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 ZHX1Q9UKY1 873 aaPredicted RBP8.69□□□□□ -1.02
TSC1-203ENST00000440111 ZC3H13Q5T200 1668 aaKnown RBP8.69□□□□□ -1.02
TSC1-203ENST00000440111 DYNC1I1O14576 645 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 ZBTB24O43167 697 aaPredicted RBP8.69□□□□□ -1.02
TSC1-203ENST00000440111 FAM69CQ0P6D2 419 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 CABP1Q9NZU7 370 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 STMN1P16949 149 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 FAM193AP78312 1265 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 SARNPP82979 210 aaKnown RBP8.69□□□□□ -1.02
TSC1-203ENST00000440111 WDR66Q8TBY9 1149 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 RAB34Q9BZG1 259 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 CALCOCO1Q9P1Z2 691 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 DNAJC5BQ9UF47 199 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 KIF2AO00139 706 aaPredicted RBP8.69□□□□□ -1.02
TSC1-203ENST00000440111 PRC1O43663 620 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 ZSCAN25Q6NSZ9 544 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 PLEKHO1Q53GL0 409 aaPredicted RBP8.69□□□□□ -1.02
TSC1-203ENST00000440111 SSH1Q8WYL5 1049 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 TRAK2O60296 914 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 SAFB2Q14151 953 aaKnown RBP eCLIP8.69□□□□□ -1.02
TSC1-203ENST00000440111 MAP7D1Q3KQU3 841 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 AMOTQ4VCS5 1084 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 TTLL5Q6EMB2 1281 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.69□□□□□ -1.024e-6■■□□□ 11.7
TSC1-203ENST00000440111 SCLT1Q96NL6 688 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 LRRIQ1Q96JM4 1722 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 IDI1Q13907 227 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 MAP7Q14244 749 aa8.69□□□□□ -1.02
TSC1-203ENST00000440111 PIK3R4Q99570 1358 aa8.68□□□□□ -1.02
TSC1-203ENST00000440111 CTNNA2P26232 953 aa8.68□□□□□ -1.02
TSC1-203ENST00000440111 PRDM10Q9NQV6 1147 aa8.68□□□□□ -1.02
TSC1-203ENST00000440111 CPSF2Q9P2I0 782 aaKnown RBP8.68□□□□□ -1.02
TSC1-203ENST00000440111 PDCL2Q8N4E4 241 aa8.68□□□□□ -1.02
TSC1-203ENST00000440111 ARHGEF10O15013 1369 aa8.68□□□□□ -1.02
TSC1-203ENST00000440111 TRIM27P14373 513 aa8.68□□□□□ -1.02
TSC1-203ENST00000440111 CLIP2Q9UDT6 1046 aa8.68□□□□□ -1.02
TSC1-203ENST00000440111 CDK12Q9NYV4 1490 aaPredicted RBP8.68□□□□□ -1.02
TSC1-203ENST00000440111 A0A1W2PP64 1363 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms