RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ADAMTS2O95450 1211 aa17.29■□□□□ 0.36
LIMD1-202ENST00000440097 ANKRD13DQ6ZTN6 518 aa17.28■□□□□ 0.36
LIMD1-202ENST00000440097 RBM42Q9BTD8 480 aaKnown RBP17.28■□□□□ 0.36
LIMD1-202ENST00000440097 RAB11FIP3O75154 756 aa17.28■□□□□ 0.36
LIMD1-202ENST00000440097 RHPN1Q8TCX5 695 aa17.28■□□□□ 0.36
LIMD1-202ENST00000440097 POLA2Q14181 598 aa17.28■□□□□ 0.36
LIMD1-202ENST00000440097 KIF1BPQ96EK5 621 aa17.28■□□□□ 0.36
LIMD1-202ENST00000440097 OSBPL3Q9H4L5 887 aa17.28■□□□□ 0.36
LIMD1-202ENST00000440097 N4BP2Q86UW6 1770 aaPredicted RBP17.27■□□□□ 0.36
LIMD1-202ENST00000440097 PKD1L3Q7Z443 1732 aa17.27■□□□□ 0.36
LIMD1-202ENST00000440097 PLEKHG2Q9H7P9 1386 aa17.27■□□□□ 0.36
LIMD1-202ENST00000440097 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.35
LIMD1-202ENST00000440097 C5P01031 1676 aa17.26■□□□□ 0.35
LIMD1-202ENST00000440097 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
LIMD1-202ENST00000440097 CD2BP2O95400 341 aaKnown RBP17.26■□□□□ 0.35
LIMD1-202ENST00000440097 IGKV5-2P06315 115 aa17.26■□□□□ 0.35
LIMD1-202ENST00000440097 ISY1Q9ULR0 285 aaKnown RBP17.26■□□□□ 0.35
LIMD1-202ENST00000440097 PA2G4Q9UQ80 394 aaKnown RBP17.26■□□□□ 0.35
LIMD1-202ENST00000440097 TRIM44Q96DX7 344 aaPredicted RBP17.25■□□□□ 0.35
LIMD1-202ENST00000440097 SUCLG2Q96I99 432 aa17.25■□□□□ 0.35
LIMD1-202ENST00000440097 ZNF330Q9Y3S2 320 aaPredicted RBP17.25■□□□□ 0.35
LIMD1-202ENST00000440097 PARP4Q9UKK3 1724 aaKnown RBP17.25■□□□□ 0.35
LIMD1-202ENST00000440097 MRC1P22897 1456 aa17.25■□□□□ 0.35
LIMD1-202ENST00000440097 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
LIMD1-202ENST00000440097 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
LIMD1-202ENST00000440097 BICC1Q9H694 974 aaKnown RBP17.25■□□□□ 0.35
LIMD1-202ENST00000440097 NEURL1BA8MQ27 555 aa17.24■□□□□ 0.35
LIMD1-202ENST00000440097 ATP5J2-PTCD1G3V325 749 aa17.24■□□□□ 0.35
LIMD1-202ENST00000440097 REC8O95072 547 aa17.24■□□□□ 0.35
LIMD1-202ENST00000440097 GAS2L3Q86XJ1 694 aa17.24■□□□□ 0.35
LIMD1-202ENST00000440097 METTL22Q9BUU2 404 aaPredicted RBP17.24■□□□□ 0.35
LIMD1-202ENST00000440097 TMOD3Q9NYL9 352 aa17.24■□□□□ 0.35
LIMD1-202ENST00000440097 MAP4K4O95819 1239 aaPredicted RBP17.24■□□□□ 0.35
LIMD1-202ENST00000440097 DDIT3P35638 169 aa17.24■□□□□ 0.35
LIMD1-202ENST00000440097 NHSL1Q5SYE7 1610 aa17.24■□□□□ 0.35
LIMD1-202ENST00000440097 A0A0G2JS52 829 aa17.23■□□□□ 0.35
LIMD1-202ENST00000440097 ABCA3Q99758 1704 aa17.23■□□□□ 0.35
LIMD1-202ENST00000440097 KAT6BQ8WYB5 2073 aa17.23■□□□□ 0.35
LIMD1-202ENST00000440097 ERC2O15083 957 aa17.23■□□□□ 0.35
LIMD1-202ENST00000440097 GCKRQ14397 625 aa17.23■□□□□ 0.35
LIMD1-202ENST00000440097 TNPO1Q92973 898 aaKnown RBP17.23■□□□□ 0.35
LIMD1-202ENST00000440097 SIL1Q9H173 461 aa17.23■□□□□ 0.35
LIMD1-202ENST00000440097 CLASRPQ8N2M8 674 aaKnown RBP17.23■□□□□ 0.35
LIMD1-202ENST00000440097 SALL3Q9BXA9 1300 aa17.23■□□□□ 0.35
LIMD1-202ENST00000440097 A1BGP04217 495 aa17.22■□□□□ 0.35
LIMD1-202ENST00000440097 MTX1Q13505 466 aa17.22■□□□□ 0.35
LIMD1-202ENST00000440097 UBE3BQ7Z3V4 1068 aa17.21■□□□□ 0.35
LIMD1-202ENST00000440097 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
LIMD1-202ENST00000440097 USP26Q9BXU7 913 aa17.21■□□□□ 0.35
LIMD1-202ENST00000440097 STAP2Q9UGK3 403 aa17.21■□□□□ 0.35
LIMD1-202ENST00000440097 G3BP1Q13283 466 aaKnown RBP eCLIP17.21■□□□□ 0.35
LIMD1-202ENST00000440097 NKX1-1Q15270 411 aaPredicted RBP17.21■□□□□ 0.35
LIMD1-202ENST00000440097 UNC5CLQ8IV45 518 aa17.2■□□□□ 0.34
LIMD1-202ENST00000440097 IFIT2P09913 472 aaKnown RBP17.2■□□□□ 0.34
LIMD1-202ENST00000440097 LRP10Q7Z4F1 713 aa17.2■□□□□ 0.34
LIMD1-202ENST00000440097 KAZALD1Q96I82 304 aa17.2■□□□□ 0.34
LIMD1-202ENST00000440097 A0A087WZG4 1122 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 NBPF26B4DH59 902 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 NBPF14Q5TI25 921 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 NBPF10Q6P3W6 841 aaKnown RBP17.19■□□□□ 0.34
LIMD1-202ENST00000440097 ERC1Q8IUD2 1116 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 NBPF15Q8N660 670 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 KLHDC4Q8TBB5 520 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 PLBD2Q8NHP8 589 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 ZBTB3Q9H5J0 574 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 ANO2Q9NQ90 1003 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 ROBO1Q9Y6N7 1651 aa17.19■□□□□ 0.34
LIMD1-202ENST00000440097 SNX21Q969T3 373 aa17.18■□□□□ 0.34
LIMD1-202ENST00000440097 GBP4Q96PP9 640 aa17.18■□□□□ 0.34
LIMD1-202ENST00000440097 TTLL7Q6ZT98 887 aa17.18■□□□□ 0.34
LIMD1-202ENST00000440097 AACSQ86V21 672 aa17.18■□□□□ 0.34
LIMD1-202ENST00000440097 CHMP3Q9Y3E7 222 aa17.18■□□□□ 0.34
LIMD1-202ENST00000440097 UTYO14607 1347 aa17.18■□□□□ 0.34
LIMD1-202ENST00000440097 TPM2P07951 284 aa17.17■□□□□ 0.34
LIMD1-202ENST00000440097 GPATCH3Q96I76 525 aa17.17■□□□□ 0.34
LIMD1-202ENST00000440097 ESYT1Q9BSJ8 1104 aa17.17■□□□□ 0.34
LIMD1-202ENST00000440097 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
LIMD1-202ENST00000440097 AOX1Q06278 1338 aa17.17■□□□□ 0.34
LIMD1-202ENST00000440097 CHMLP26374 656 aa17.17■□□□□ 0.34
LIMD1-202ENST00000440097 RAB3GAP1Q15042 981 aa17.17■□□□□ 0.34
LIMD1-202ENST00000440097 EXOC5O00471 708 aa17.16■□□□□ 0.34
LIMD1-202ENST00000440097 RABEP1Q15276 862 aa17.16■□□□□ 0.34
LIMD1-202ENST00000440097 EPHA10Q5JZY3 1008 aa17.16■□□□□ 0.34
LIMD1-202ENST00000440097 CIZ1Q9ULV3 898 aaPredicted RBP17.16■□□□□ 0.34
LIMD1-202ENST00000440097 CNTROBQ8N137 903 aa17.16■□□□□ 0.34
LIMD1-202ENST00000440097 PI4K2BQ8TCG2 481 aa17.16■□□□□ 0.34
LIMD1-202ENST00000440097 PIGBQ92521 554 aa17.16■□□□□ 0.34
LIMD1-202ENST00000440097 K7ELQ4 463 aaPredicted RBP17.15■□□□□ 0.34
LIMD1-202ENST00000440097 SKOR2Q2VWA4 1001 aaPredicted RBP17.15■□□□□ 0.34
LIMD1-202ENST00000440097 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
LIMD1-202ENST00000440097 GOLGB1Q14789 3259 aaKnown RBP17.15■□□□□ 0.34
LIMD1-202ENST00000440097 GLRX3O76003 335 aaKnown RBP17.14■□□□□ 0.33
LIMD1-202ENST00000440097 CCDC8Q9H0W5 538 aaPredicted RBP17.14■□□□□ 0.33
LIMD1-202ENST00000440097 EP400Q96L91 3159 aa17.14■□□□□ 0.33
LIMD1-202ENST00000440097 MCCP23508 829 aa17.14■□□□□ 0.33
LIMD1-202ENST00000440097 KIAA1211Q6ZU35 1233 aa17.13■□□□□ 0.33
LIMD1-202ENST00000440097 ECHDC1Q9NTX5 307 aa17.13■□□□□ 0.33
LIMD1-202ENST00000440097 SASH1O94885 1247 aa17.13■□□□□ 0.33
LIMD1-202ENST00000440097 DNAJC10Q8IXB1 793 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms