RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 TTLL7Q6ZT98 887 aa30.77■■■□□ 2.52
VARS-217ENST00000440048 FAM9BQ8IZU0 186 aa30.77■■■□□ 2.52
VARS-217ENST00000440048 ZNF784Q8NCA9 323 aaPredicted RBP30.77■■■□□ 2.52
VARS-217ENST00000440048 NECTIN2Q92692 538 aa30.77■■■□□ 2.52
VARS-217ENST00000440048 HLFQ16534 295 aa30.76■■■□□ 2.51
VARS-217ENST00000440048 PROSER3Q2NL68 480 aa30.75■■■□□ 2.51
VARS-217ENST00000440048 LRP10Q7Z4F1 713 aa30.75■■■□□ 2.51
VARS-217ENST00000440048 WWC1Q8IX03 1113 aa30.75■■■□□ 2.51
VARS-217ENST00000440048 NUP98P52948 1817 aa30.75■■■□□ 2.51
VARS-217ENST00000440048 MAP3K15Q6ZN16 1313 aa30.74■■■□□ 2.51
VARS-217ENST00000440048 ANXA1P04083 346 aa30.74■■■□□ 2.51
VARS-217ENST00000440048 HOXB7P09629 217 aa30.74■■■□□ 2.51
VARS-217ENST00000440048 CHRNA5P30532 468 aa30.74■■■□□ 2.51
VARS-217ENST00000440048 NCBP3Q53F19 620 aaKnown RBP30.74■■■□□ 2.51
VARS-217ENST00000440048 KIF6Q6ZMV9 814 aa30.74■■■□□ 2.51
VARS-217ENST00000440048 ERVV-1B6SEH8 477 aa30.73■■■□□ 2.51
VARS-217ENST00000440048 PRR5LQ6MZQ0 368 aa30.73■■■□□ 2.51
VARS-217ENST00000440048 ANKRD31Q8N7Z5 1873 aa30.72■■■□□ 2.51
VARS-217ENST00000440048 DUSP27Q5VZP5 1158 aa30.72■■■□□ 2.51
VARS-217ENST00000440048 NIP7Q9Y221 180 aaKnown RBP eCLIP30.72■■■□□ 2.51
VARS-217ENST00000440048 PIM2Q9P1W9 311 aa30.71■■■□□ 2.51
VARS-217ENST00000440048 BCS1LQ9Y276 419 aa30.71■■■□□ 2.51
VARS-217ENST00000440048 HDGFL1Q5TGJ6 251 aa30.7■■■□□ 2.51
VARS-217ENST00000440048 CCDC24Q8N4L8 307 aa30.7■■■□□ 2.51
VARS-217ENST00000440048 CNBD1Q8NA66 436 aa30.7■■■□□ 2.51
VARS-217ENST00000440048 ZBTB3Q9H5J0 574 aa30.7■■■□□ 2.51
VARS-217ENST00000440048 DDX21Q9NR30 783 aaKnown RBP eCLIP30.7■■■□□ 2.51
VARS-217ENST00000440048 SALL2Q9Y467 1007 aaPredicted RBP30.69■■■□□ 2.5
VARS-217ENST00000440048 NBPF5PQ86XG9 351 aaPredicted RBP30.68■■■□□ 2.5
VARS-217ENST00000440048 BRIP1Q9BX63 1249 aa30.68■■■□□ 2.5
VARS-217ENST00000440048 CHPF2Q9P2E5 772 aa30.68■■■□□ 2.5
VARS-217ENST00000440048 DLEC1Q9Y238 1755 aa30.67■■■□□ 2.5
VARS-217ENST00000440048 NPHP1O15259 732 aa30.67■■■□□ 2.5
VARS-217ENST00000440048 ARFGEF1Q9Y6D6 1849 aa30.66■■■□□ 2.5
VARS-217ENST00000440048 C2CD5Q86YS7 1000 aa30.66■■■□□ 2.5
VARS-217ENST00000440048 ATP10DQ9P241 1426 aa30.65■■■□□ 2.5
VARS-217ENST00000440048 ELL2O00472 640 aaPredicted RBP30.65■■■□□ 2.5
VARS-217ENST00000440048 ST5P78524 1137 aa30.65■■■□□ 2.5
VARS-217ENST00000440048 DALRD3Q5D0E6 543 aaKnown RBP30.65■■■□□ 2.5
VARS-217ENST00000440048 COPS6Q7L5N1 327 aa30.65■■■□□ 2.5
VARS-217ENST00000440048 C8orf58Q8NAV2 365 aa30.65■■■□□ 2.5
VARS-217ENST00000440048 XAGE3Q8WTP9 111 aa30.65■■■□□ 2.5
VARS-217ENST00000440048 TSR2Q969E8 191 aaKnown RBP30.65■■■□□ 2.5
VARS-217ENST00000440048 IL16Q14005 1332 aa30.65■■■□□ 2.5
VARS-217ENST00000440048 H0YIN7 160 aa30.64■■■□□ 2.5
VARS-217ENST00000440048 GIGYF2Q6Y7W6 1299 aaKnown RBP30.64■■■□□ 2.5
VARS-217ENST00000440048 FAM177BA6PVY3 158 aa30.63■■■□□ 2.49
VARS-217ENST00000440048 PDE6BP35913 854 aa30.63■■■□□ 2.49
VARS-217ENST00000440048 AIMP1Q12904 312 aaKnown RBP30.63■■■□□ 2.49
VARS-217ENST00000440048 TPTE2Q6XPS3 522 aa30.63■■■□□ 2.49
VARS-217ENST00000440048 DBF4Q9UBU7 674 aaPredicted RBP30.63■■■□□ 2.49
VARS-217ENST00000440048 COL11A2P13942 1736 aaPredicted RBP30.61■■■□□ 2.49
VARS-217ENST00000440048 GPTP24298 496 aa30.61■■■□□ 2.49
VARS-217ENST00000440048 WDR63Q8IWG1 891 aa30.61■■■□□ 2.49
VARS-217ENST00000440048 PDZRN3Q9UPQ7 1066 aa30.61■■■□□ 2.49
VARS-217ENST00000440048 ZNF34Q8IZ26 560 aa30.6■■■□□ 2.49
VARS-217ENST00000440048 UBN2Q6ZU65 1347 aa30.59■■■□□ 2.49
VARS-217ENST00000440048 TSPYL6Q8N831 410 aa30.59■■■□□ 2.49
VARS-217ENST00000440048 ARHGAP27Q6ZUM4 889 aa30.58■■■□□ 2.49
VARS-217ENST00000440048 HYPKQ9NX55 129 aa30.58■■■□□ 2.49
VARS-217ENST00000440048 CCER2I3L3R5 266 aa30.57■■■□□ 2.48
VARS-217ENST00000440048 TTLL6Q8N841 843 aa30.57■■■□□ 2.48
VARS-217ENST00000440048 NYXQ9GZU5 481 aa30.57■■■□□ 2.48
VARS-217ENST00000440048 ANKRD36CQ5JPF3 1778 aa30.56■■■□□ 2.48
VARS-217ENST00000440048 SUSD4Q5VX71 490 aa30.56■■■□□ 2.48
VARS-217ENST00000440048 ZNF622Q969S3 477 aaKnown RBP eCLIP30.56■■■□□ 2.48
VARS-217ENST00000440048 GTF2E1P29083 439 aaPredicted RBP30.55■■■□□ 2.48
VARS-217ENST00000440048 IBTKQ9P2D0 1353 aaPredicted RBP30.54■■■□□ 2.48
VARS-217ENST00000440048 NUTM1Q86Y26 1132 aa30.54■■■□□ 2.48
VARS-217ENST00000440048 FANCIQ9NVI1 1328 aa30.53■■■□□ 2.48
VARS-217ENST00000440048 SRGNP10124 158 aa30.53■■■□□ 2.48
VARS-217ENST00000440048 PARP10Q53GL7 1025 aa30.53■■■□□ 2.48
VARS-217ENST00000440048 HSP90AB3PQ58FF7 597 aa30.53■■■□□ 2.48
VARS-217ENST00000440048 PLBD2Q8NHP8 589 aa30.53■■■□□ 2.48
VARS-217ENST00000440048 ERFEQ4G0M1 354 aa30.52■■■□□ 2.48
VARS-217ENST00000440048 CCDC30Q5VVM6 783 aa30.52■■■□□ 2.48
VARS-217ENST00000440048 ANKRD13DQ6ZTN6 518 aa30.52■■■□□ 2.48
VARS-217ENST00000440048 CHMP4AQ9BY43 222 aa30.52■■■□□ 2.48
VARS-217ENST00000440048 ABCC12Q96J65 1359 aa30.52■■■□□ 2.48
VARS-217ENST00000440048 KLRG2A4D1S0 409 aaPredicted RBP30.51■■■□□ 2.47
VARS-217ENST00000440048 NTSR2O95665 410 aa30.51■■■□□ 2.47
VARS-217ENST00000440048 TCIRG1Q13488 830 aa30.51■■■□□ 2.47
VARS-217ENST00000440048 TWISTNBQ3B726 338 aaPredicted RBP30.51■■■□□ 2.47
VARS-217ENST00000440048 STYK1Q6J9G0 422 aa30.51■■■□□ 2.47
VARS-217ENST00000440048 MASTLQ96GX5 879 aa30.51■■■□□ 2.47
VARS-217ENST00000440048 SPINK5Q9NQ38 1064 aaPredicted RBP30.51■■■□□ 2.47
VARS-217ENST00000440048 PPP1R42Q7Z4L9 355 aa30.5■■■□□ 2.47
VARS-217ENST00000440048 PHAXQ9H814 394 aaKnown RBP30.5■■■□□ 2.47
VARS-217ENST00000440048 ADCY9O60503 1353 aa30.5■■■□□ 2.47
VARS-217ENST00000440048 CACNA1SQ13698 1873 aa30.5■■■□□ 2.47
VARS-217ENST00000440048 TNRC6CQ9HCJ0 1690 aaKnown RBP30.49■■■□□ 2.47
VARS-217ENST00000440048 DIEXFQ68CQ4 756 aaKnown RBP30.49■■■□□ 2.47
VARS-217ENST00000440048 CNKSR1Q969H4 720 aa30.48■■■□□ 2.47
VARS-217ENST00000440048 SLX4Q8IY92 1834 aa30.47■■■□□ 2.47
VARS-217ENST00000440048 ARFGEF2Q9Y6D5 1785 aa30.47■■■□□ 2.47
VARS-217ENST00000440048 NLRP10Q86W26 655 aa30.47■■■□□ 2.47
VARS-217ENST00000440048 UTP14AQ9BVJ6 771 aaKnown RBP30.47■■■□□ 2.47
VARS-217ENST00000440048 ZNF521Q96K83 1311 aa30.47■■■□□ 2.47
VARS-217ENST00000440048 NPR1P16066 1061 aa30.46■■■□□ 2.47
VARS-217ENST00000440048 GOLGA2Q08379 1002 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms