RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 PHF8Q9UPP1 1060 aa18.52■□□□□ 0.55
APP-208ENST00000439274 PROSER3Q2NL68 480 aa18.51■□□□□ 0.55
APP-208ENST00000439274 ZNF530Q6P9A1 599 aaPredicted RBP18.51■□□□□ 0.55
APP-208ENST00000439274 DIAPH3Q9NSV4 1193 aa18.51■□□□□ 0.55
APP-208ENST00000439274 MED1Q15648 1581 aaPredicted RBP18.51■□□□□ 0.55
APP-208ENST00000439274 STX6O43752 255 aa18.51■□□□□ 0.55
APP-208ENST00000439274 ADCK5Q3MIX3 580 aa18.51■□□□□ 0.55
APP-208ENST00000439274 GLRX3O76003 335 aaKnown RBP18.5■□□□□ 0.55
APP-208ENST00000439274 MAP3K2Q9Y2U5 619 aa18.5■□□□□ 0.55
APP-208ENST00000439274 PRAMEF22A3QJZ6 481 aa18.5■□□□□ 0.55
APP-208ENST00000439274 HOXB7P09629 217 aa18.5■□□□□ 0.55
APP-208ENST00000439274 CWF19L2Q2TBE0 894 aaKnown RBP18.5■□□□□ 0.55
APP-208ENST00000439274 HSP90AB4PQ58FF6 505 aa18.5■□□□□ 0.55
APP-208ENST00000439274 PRPF40BQ6NWY9 871 aaKnown RBP18.5■□□□□ 0.55
APP-208ENST00000439274 CCDC83Q8IWF9 413 aa18.5■□□□□ 0.55
APP-208ENST00000439274 SMC3Q9UQE7 1217 aa18.5■□□□□ 0.55
APP-208ENST00000439274 USP54Q70EL1 1684 aa18.5■□□□□ 0.55
APP-208ENST00000439274 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
APP-208ENST00000439274 FIBPO43427 364 aa18.49■□□□□ 0.55
APP-208ENST00000439274 PHF14O94880 888 aa18.49■□□□□ 0.55
APP-208ENST00000439274 PTMAP06454 111 aaKnown RBP18.49■□□□□ 0.55
APP-208ENST00000439274 CLASRPQ8N2M8 674 aaKnown RBP18.49■□□□□ 0.55
APP-208ENST00000439274 TMEM87AQ8NBN3 555 aa18.49■□□□□ 0.55
APP-208ENST00000439274 KDM3BQ7LBC6 1761 aa18.49■□□□□ 0.55
APP-208ENST00000439274 TTC41PQ6P2S7 1318 aa18.49■□□□□ 0.55
APP-208ENST00000439274 JAKMIP1Q96N16 626 aaKnown RBP18.49■□□□□ 0.55
APP-208ENST00000439274 HYPKQ9NX55 129 aa18.49■□□□□ 0.55
APP-208ENST00000439274 C9orf78Q9NZ63 289 aaPredicted RBP18.49■□□□□ 0.55
APP-208ENST00000439274 RGPD2P0DJD1 1756 aa18.48■□□□□ 0.55
APP-208ENST00000439274 HSPA2P54652 639 aa18.48■□□□□ 0.55
APP-208ENST00000439274 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.48■□□□□ 0.55
APP-208ENST00000439274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.48■□□□□ 0.55
APP-208ENST00000439274 F13A1P00488 732 aa18.48■□□□□ 0.55
APP-208ENST00000439274 RBM10P98175 930 aaKnown RBP18.48■□□□□ 0.55
APP-208ENST00000439274 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
APP-208ENST00000439274 CCDC183Q5T5S1 534 aa18.47■□□□□ 0.55
APP-208ENST00000439274 ECHDC1Q9NTX5 307 aa18.47■□□□□ 0.55
APP-208ENST00000439274 DBF4Q9UBU7 674 aaPredicted RBP18.47■□□□□ 0.55
APP-208ENST00000439274 CRYBG1Q9Y4K1 1723 aa18.47■□□□□ 0.55
APP-208ENST00000439274 NFAT5O94916 1531 aa18.47■□□□□ 0.55
APP-208ENST00000439274 LMTK3Q96Q04 1460 aa18.47■□□□□ 0.55
APP-208ENST00000439274 GJB2P29033 226 aa18.47■□□□□ 0.55
APP-208ENST00000439274 PDRG1Q9NUG6 133 aa18.47■□□□□ 0.55
APP-208ENST00000439274 USP25Q9UHP3 1055 aa18.47■□□□□ 0.55
APP-208ENST00000439274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.47■□□□□ 0.55
APP-208ENST00000439274 IFIT2P09913 472 aaKnown RBP18.46■□□□□ 0.55
APP-208ENST00000439274 MCM5P33992 734 aa18.46■□□□□ 0.55
APP-208ENST00000439274 MTX1Q13505 466 aa18.46■□□□□ 0.55
APP-208ENST00000439274 PXDNQ92626 1479 aa18.46■□□□□ 0.55
APP-208ENST00000439274 HCLS1P14317 486 aaPredicted RBP18.46■□□□□ 0.55
APP-208ENST00000439274 COL9A3Q14050 684 aaPredicted RBP18.46■□□□□ 0.55
APP-208ENST00000439274 AACSQ86V21 672 aa18.46■□□□□ 0.55
APP-208ENST00000439274 ST3GAL1Q11201 340 aa18.45■□□□□ 0.54
APP-208ENST00000439274 ZNF830Q96NB3 372 aaPredicted RBP18.45■□□□□ 0.54
APP-208ENST00000439274 RNMTO43148 476 aaKnown RBP18.45■□□□□ 0.54
APP-208ENST00000439274 UBE2HP62256 183 aa18.45■□□□□ 0.54
APP-208ENST00000439274 DNM1Q05193 864 aaKnown RBP18.45■□□□□ 0.54
APP-208ENST00000439274 PSME1Q06323 249 aa18.45■□□□□ 0.54
APP-208ENST00000439274 RUFY2Q8WXA3 655 aa18.45■□□□□ 0.54
APP-208ENST00000439274 PLEKHO1Q53GL0 409 aaPredicted RBP18.44■□□□□ 0.54
APP-208ENST00000439274 ESCO1Q5FWF5 840 aa18.44■□□□□ 0.54
APP-208ENST00000439274 NECAB1Q8N987 351 aa18.44■□□□□ 0.54
APP-208ENST00000439274 FAM227BQ96M60 508 aa18.44■□□□□ 0.54
APP-208ENST00000439274 STRCQ7RTU9 1775 aa18.44■□□□□ 0.54
APP-208ENST00000439274 UQCRHLA0A096LP55 91 aa18.44■□□□□ 0.54
APP-208ENST00000439274 GIGYF1O75420 1035 aaPredicted RBP18.44■□□□□ 0.54
APP-208ENST00000439274 UQCRHP07919 91 aa18.44■□□□□ 0.54
APP-208ENST00000439274 TERF1P54274 439 aa18.44■□□□□ 0.54
APP-208ENST00000439274 KSR2Q6VAB6 950 aa18.44■□□□□ 0.54
APP-208ENST00000439274 MTMR6Q9Y217 621 aa18.44■□□□□ 0.54
APP-208ENST00000439274 VPS53Q5VIR6 699 aa18.43■□□□□ 0.54
APP-208ENST00000439274 SUCLG2Q96I99 432 aa18.43■□□□□ 0.54
APP-208ENST00000439274 CCDC8Q9H0W5 538 aaPredicted RBP18.43■□□□□ 0.54
APP-208ENST00000439274 ZSWIM6Q9HCJ5 1215 aa18.43■□□□□ 0.54
APP-208ENST00000439274 CYP46A1Q9Y6A2 500 aa18.43■□□□□ 0.54
APP-208ENST00000439274 AIMP1Q12904 312 aaKnown RBP18.43■□□□□ 0.54
APP-208ENST00000439274 ME3Q16798 604 aa18.43■□□□□ 0.54
APP-208ENST00000439274 TLR7Q9NYK1 1049 aaKnown RBP18.43■□□□□ 0.54
APP-208ENST00000439274 VPS37CA5D8V6 355 aaPredicted RBP18.42■□□□□ 0.54
APP-208ENST00000439274 ALDH1L1O75891 902 aa18.42■□□□□ 0.54
APP-208ENST00000439274 CSPP1Q1MSJ5 1256 aa18.42■□□□□ 0.54
APP-208ENST00000439274 C1orf141Q5JVX7 400 aa18.42■□□□□ 0.54
APP-208ENST00000439274 GIMAP6Q6P9H5 292 aa18.42■□□□□ 0.54
APP-208ENST00000439274 GPATCH3Q96I76 525 aa18.42■□□□□ 0.54
APP-208ENST00000439274 KAZALD1Q96I82 304 aa18.42■□□□□ 0.54
APP-208ENST00000439274 RBM8AQ9Y5S9 174 aaKnown RBP18.42■□□□□ 0.54
APP-208ENST00000439274 CCDC171Q6TFL3 1326 aa18.42■□□□□ 0.54
APP-208ENST00000439274 LMO7Q8WWI1 1683 aa18.42■□□□□ 0.54
APP-208ENST00000439274 SASH1O94885 1247 aa18.42■□□□□ 0.54
APP-208ENST00000439274 NECTIN1Q15223 517 aa18.42■□□□□ 0.54
APP-208ENST00000439274 GLIPR1L2Q4G1C9 344 aa18.42■□□□□ 0.54
APP-208ENST00000439274 FAM184AQ8NB25 1140 aa18.42■□□□□ 0.54
APP-208ENST00000439274 EAF2Q96CJ1 260 aaPredicted RBP18.42■□□□□ 0.54
APP-208ENST00000439274 EVI5LQ96CN4 794 aa18.42■□□□□ 0.54
APP-208ENST00000439274 CHMP4AQ9BY43 222 aa18.42■□□□□ 0.54
APP-208ENST00000439274 BICC1Q9H694 974 aaKnown RBP18.42■□□□□ 0.54
APP-208ENST00000439274 ADCY5O95622 1261 aa18.41■□□□□ 0.54
APP-208ENST00000439274 NMIQ13287 307 aaPredicted RBP18.41■□□□□ 0.54
APP-208ENST00000439274 SIL1Q9H173 461 aa18.41■□□□□ 0.54
APP-208ENST00000439274 KCNJ4P48050 445 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms