RNA–Protein interactions for RNA: ENST00000439079.1

LINC00415-201, long intergenic non-protein coding RNA 415, humanhuman

TSL 3 BASIC

Gene LINC00415, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00415-201ENST00000439079 MAP10Q9P2G4 905 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 KLHL42Q9P2K6 505 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 FAN1Q9Y2M0 1017 aa6.27□□□□□ -1.41
LINC00415-201ENST00000439079 ROBO1Q9Y6N7 1651 aa6.26□□□□□ -1.41
LINC00415-201ENST00000439079 DXOO77932 396 aaKnown RBP6.26□□□□□ -1.41
LINC00415-201ENST00000439079 CENPBP07199 599 aaPredicted RBP6.26□□□□□ -1.41
LINC00415-201ENST00000439079 CCNYL3P0C7X3 344 aa6.26□□□□□ -1.41
LINC00415-201ENST00000439079 RAD51AP2Q09MP3 1159 aa6.26□□□□□ -1.41
LINC00415-201ENST00000439079 GGT6Q6P531 493 aa6.26□□□□□ -1.41
LINC00415-201ENST00000439079 FAM160A2Q8N612 972 aaPredicted RBP6.26□□□□□ -1.41
LINC00415-201ENST00000439079 GPKOWQ92917 476 aaPredicted RBP eCLIP6.26□□□□□ -1.41
LINC00415-201ENST00000439079 PLCD4Q9BRC7 762 aa6.26□□□□□ -1.41
LINC00415-201ENST00000439079 GEMIN8Q9NWZ8 242 aaKnown RBP6.26□□□□□ -1.41
LINC00415-201ENST00000439079 GPSM3Q9Y4H4 160 aa6.26□□□□□ -1.41
LINC00415-201ENST00000439079 ARHGAP35Q9NRY4 1499 aa6.26□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L15C9J2P7 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L10C9JJH3 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L13C9JLJ4 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L12C9JPN9 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L11C9JVI0 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L21D6R901 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L18D6R9N7 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L22D6RA61 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L17D6RBQ6 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L19D6RCP7 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L20D6RJB6 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 PARNO95453 639 aaKnown RBP6.25□□□□□ -1.41
LINC00415-201ENST00000439079 MMP16P51512 607 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 PTK2Q05397 1052 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L24Q0WX57 530 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 KCNH2Q12809 1159 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 LCE2DQ5TA82 110 aaPredicted RBP6.25□□□□□ -1.41
LINC00415-201ENST00000439079 PDXDC2PQ6P474 469 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 RGL4Q8IZJ4 473 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 NUDT12Q9BQG2 462 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 CHPF2Q9P2E5 772 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 TNRQ92752 1358 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 PZPP20742 1482 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 UGGT1Q9NYU2 1555 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 FAM135BQ49AJ0 1406 aa6.25□□□□□ -1.41
LINC00415-201ENST00000439079 SPAG9O60271 1321 aaKnown RBP6.25□□□□□ -1.41
LINC00415-201ENST00000439079 ATP5J2-PTCD1G3V325 749 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 ICMTO60725 284 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 HNRNPMP52272 730 aaKnown RBP eCLIP6.24□□□□□ -1.41
LINC00415-201ENST00000439079 NFE2L2Q16236 605 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 ZNF746Q6NUN9 644 aaPredicted RBP6.24□□□□□ -1.41
LINC00415-201ENST00000439079 NYAP1Q6ZVC0 841 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 ANKLE2Q86XL3 938 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 NT5DC4Q86YG4 428 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 GLYCTKQ8IVS8 523 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 DHX38Q92620 1227 aaKnown RBP6.24□□□□□ -1.41
LINC00415-201ENST00000439079 RNF34Q969K3 372 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 ZSWIM4Q9H7M6 989 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 TERF2IPQ9NYB0 399 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 UBR1Q8IWV7 1749 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 CLIP1P30622 1438 aa6.24□□□□□ -1.41
LINC00415-201ENST00000439079 PHLPP1O60346 1717 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L3A6NCW0 530 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L4A6NCW7 530 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 CREB3O43889 395 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 PEX14O75381 377 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 COPS2P61201 443 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 NBPF14Q5TI25 921 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L2Q6R6M4 530 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 THSD4Q6ZMP0 1018 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 USP17L1Q7RTZ2 530 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 OSBPL2Q9H1P3 480 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 CAPN10Q9HC96 672 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 PRKAB1Q9Y478 270 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 LRP6O75581 1613 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 GPATCH8Q9UKJ3 1502 aaKnown RBP6.23□□□□□ -1.41
LINC00415-201ENST00000439079 FMN1Q68DA7 1419 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 MIA2Q96PC5 1412 aa6.23□□□□□ -1.41
LINC00415-201ENST00000439079 EP400Q96L91 3159 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 MAP3K1Q13233 1512 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 PIK3CDO00329 1044 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 C21orf2O43822 256 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 MAP4K4O95819 1239 aaPredicted RBP6.22□□□□□ -1.41
LINC00415-201ENST00000439079 SKIP12755 728 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 SF3B2Q13435 895 aaKnown RBP6.22□□□□□ -1.41
LINC00415-201ENST00000439079 LONRF3Q496Y0 759 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 APBB1IPQ7Z5R6 666 aaPredicted RBP6.22□□□□□ -1.41
LINC00415-201ENST00000439079 METTL16Q86W50 562 aaKnown RBP6.22□□□□□ -1.41
LINC00415-201ENST00000439079 NLGN1Q8N2Q7 840 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 TMEM87AQ8NBN3 555 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 MRS2Q9HD23 443 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 CEP126Q9P2H0 1117 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 NLRP1Q9C000 1473 aa6.22□□□□□ -1.41
LINC00415-201ENST00000439079 KDM5DQ9BY66 1539 aa6.21□□□□□ -1.42
LINC00415-201ENST00000439079 H3BRB1 525 aa6.21□□□□□ -1.42
LINC00415-201ENST00000439079 U2SURPO15042 1029 aaKnown RBP6.21□□□□□ -1.42
LINC00415-201ENST00000439079 ZPR1O75312 459 aa6.21□□□□□ -1.42
LINC00415-201ENST00000439079 ADH1BP00325 375 aa6.21□□□□□ -1.42
LINC00415-201ENST00000439079 XPCQ01831 940 aaPredicted RBP6.21□□□□□ -1.42
LINC00415-201ENST00000439079 TAGLNQ01995 201 aaKnown RBP6.21□□□□□ -1.42
LINC00415-201ENST00000439079 ARID5AQ03989 594 aa6.21□□□□□ -1.42
LINC00415-201ENST00000439079 TCEAL1Q15170 157 aa6.21□□□□□ -1.42
LINC00415-201ENST00000439079 VPS37DQ86XT2 251 aa6.21□□□□□ -1.42
LINC00415-201ENST00000439079 TUT1Q9H6E5 874 aaKnown RBP6.21□□□□□ -1.42
LINC00415-201ENST00000439079 COL4A3BPQ9Y5P4 624 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms