RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 BCRP11274 1271 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 WEE1P30291 646 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 CDCA8Q53HL2 280 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 FAM200AQ8TCP9 573 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 SCG3Q8WXD2 468 aaKnown RBP6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 HINFPQ9BQA5 517 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 KRTAP4-6Q9BYQ5 205 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 SERPINA10Q9UK55 444 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 HCN4Q9Y3Q4 1203 aa6.85□□□□□ -1.31
HMGB3P12-201ENST00000438745 FAM69CQ0P6D2 419 aa6.84□□□□□ -1.31
HMGB3P12-201ENST00000438745 LAMC2Q13753 1193 aa6.84□□□□□ -1.31
HMGB3P12-201ENST00000438745 BICDL1Q6ZP65 573 aa6.84□□□□□ -1.31
HMGB3P12-201ENST00000438745 TMEM151AQ8N4L1 468 aa6.84□□□□□ -1.31
HMGB3P12-201ENST00000438745 OXCT2Q9BYC2 517 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P12-201ENST00000438745 PHACTR1Q9C0D0 580 aa6.84□□□□□ -1.31
HMGB3P12-201ENST00000438745 CHMP3Q9Y3E7 222 aa6.84□□□□□ -1.31
HMGB3P12-201ENST00000438745 OIP5O43482 229 aa6.83□□□□□ -1.32
HMGB3P12-201ENST00000438745 ATG7O95352 703 aa6.83□□□□□ -1.32
HMGB3P12-201ENST00000438745 SUZ12Q15022 739 aaKnown RBP6.83□□□□□ -1.32
HMGB3P12-201ENST00000438745 C1orf229Q6ZS94 237 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P12-201ENST00000438745 ALDH16A1Q8IZ83 802 aa6.83□□□□□ -1.32
HMGB3P12-201ENST00000438745 NOVA2Q9UNW9 492 aaKnown RBP6.83□□□□□ -1.32
HMGB3P12-201ENST00000438745 ARID3CA6NKF2 412 aa6.82□□□□□ -1.32
HMGB3P12-201ENST00000438745 IRS1P35568 1242 aa6.82□□□□□ -1.32
HMGB3P12-201ENST00000438745 LRRC69Q6ZNQ3 347 aa6.82□□□□□ -1.32
HMGB3P12-201ENST00000438745 STRN4Q9NRL3 753 aa6.82□□□□□ -1.32
HMGB3P12-201ENST00000438745 ENAMQ9NRM1 1142 aa6.82□□□□□ -1.32
HMGB3P12-201ENST00000438745 ANKIB1Q9P2G1 1089 aa6.82□□□□□ -1.32
HMGB3P12-201ENST00000438745 GDF2Q9UK05 429 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P12-201ENST00000438745 ZMIZ1Q9ULJ6 1067 aa6.82□□□□□ -1.32
HMGB3P12-201ENST00000438745 ACIN1Q9UKV3 1341 aaKnown RBP6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 KHNYNO15037 678 aaKnown RBP6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 ARAFP10398 606 aa6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 BMP4P12644 408 aa6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 SWI5Q1ZZU3 235 aa6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 RHPN1Q8TCX5 695 aa6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 SUSD3Q96L08 255 aa6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 AVENQ9NQS1 362 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 MARK1Q9P0L2 795 aa6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 KLF15Q9UIH9 416 aa6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 GJA3Q9Y6H8 435 aa6.81□□□□□ -1.32
HMGB3P12-201ENST00000438745 DCDC2BA2VCK2 349 aa6.8□□□□□ -1.32
HMGB3P12-201ENST00000438745 FOXO3O43524 673 aa6.8□□□□□ -1.32
HMGB3P12-201ENST00000438745 LGR5O75473 907 aa6.8□□□□□ -1.32
HMGB3P12-201ENST00000438745 KCNQ4P56696 695 aa6.8□□□□□ -1.32
HMGB3P12-201ENST00000438745 MAP3K10Q02779 954 aa6.8□□□□□ -1.32
HMGB3P12-201ENST00000438745 GOLGA6L1Q8N7Z2 621 aa6.8□□□□□ -1.32
HMGB3P12-201ENST00000438745 ZNF280CQ8ND82 737 aa6.8□□□□□ -1.32
HMGB3P12-201ENST00000438745 PBXIP1Q96AQ6 731 aa6.8□□□□□ -1.32
HMGB3P12-201ENST00000438745 C1orf115Q9H7X2 142 aa6.8□□□□□ -1.32
HMGB3P12-201ENST00000438745 CD33P20138 364 aa6.79□□□□□ -1.32
HMGB3P12-201ENST00000438745 RTN1Q16799 776 aa6.79□□□□□ -1.32
HMGB3P12-201ENST00000438745 GALNT6Q8NCL4 622 aa6.79□□□□□ -1.32
HMGB3P12-201ENST00000438745 CHMP7Q8WUX9 453 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P12-201ENST00000438745 EDARADDQ8WWZ3 215 aa6.79□□□□□ -1.32
HMGB3P12-201ENST00000438745 CCDC97Q96F63 343 aaPredicted RBP6.79□□□□□ -1.32
HMGB3P12-201ENST00000438745 NEUROD4Q9HD90 331 aa6.79□□□□□ -1.32
HMGB3P12-201ENST00000438745 DMGDHQ9UI17 866 aaKnown RBP6.79□□□□□ -1.32
HMGB3P12-201ENST00000438745 SHISA8B8ZZ34 492 aa6.78□□□□□ -1.32
HMGB3P12-201ENST00000438745 SFSWAPQ12872 951 aaKnown RBP6.78□□□□□ -1.32
HMGB3P12-201ENST00000438745 OCLNQ16625 522 aa6.78□□□□□ -1.32
HMGB3P12-201ENST00000438745 HIF1AQ16665 826 aa6.78□□□□□ -1.32
HMGB3P12-201ENST00000438745 IER5Q5VY09 327 aa6.78□□□□□ -1.32
HMGB3P12-201ENST00000438745 SLCO4C1Q6ZQN7 724 aa6.78□□□□□ -1.32
HMGB3P12-201ENST00000438745 MYO19Q96H55 970 aa6.78□□□□□ -1.32
HMGB3P12-201ENST00000438745 HSH2DQ96JZ2 352 aa6.78□□□□□ -1.32
HMGB3P12-201ENST00000438745 GGA1Q9UJY5 639 aa6.78□□□□□ -1.32
HMGB3P12-201ENST00000438745 BCS1LQ9Y276 419 aa6.78□□□□□ -1.32
HMGB3P12-201ENST00000438745 HOXB4P17483 251 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P12-201ENST00000438745 MARSP56192 900 aaKnown RBP6.77□□□□□ -1.33
HMGB3P12-201ENST00000438745 ZNF468Q5VIY5 522 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P12-201ENST00000438745 C14orf37Q86TY3 774 aa6.77□□□□□ -1.33
HMGB3P12-201ENST00000438745 STK32AQ8WU08 396 aa6.77□□□□□ -1.33
HMGB3P12-201ENST00000438745 SCARF2Q96GP6 870 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P12-201ENST00000438745 MDFIQ99750 246 aa6.77□□□□□ -1.33
HMGB3P12-201ENST00000438745 DNMT3AQ9Y6K1 912 aaPredicted RBP6.77□□□□□ -1.33
HMGB3P12-201ENST00000438745 EPXP11678 715 aa6.76□□□□□ -1.33
HMGB3P12-201ENST00000438745 TYRO3Q06418 890 aa6.76□□□□□ -1.33
HMGB3P12-201ENST00000438745 GRIN2CQ14957 1233 aa6.76□□□□□ -1.33
HMGB3P12-201ENST00000438745 GPAT2Q6NUI2 795 aa6.76□□□□□ -1.33
HMGB3P12-201ENST00000438745 BTLAQ7Z6A9 289 aa6.76□□□□□ -1.33
HMGB3P12-201ENST00000438745 CCDC82Q8N4S0 544 aa6.76□□□□□ -1.33
HMGB3P12-201ENST00000438745 QTRT2Q9H974 415 aaKnown RBP6.76□□□□□ -1.33
HMGB3P12-201ENST00000438745 NEURL1BA8MQ27 555 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 RNF225M0QZC1 329 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 ADH6P28332 368 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 TMEM164Q5U3C3 297 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 FCHSD1Q86WN1 690 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 BEND7Q8N7W2 519 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 NEDD1Q8NHV4 660 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 CLP1Q92989 425 aaKnown RBP6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 COL26A1Q96A83 441 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 NGLY1Q96IV0 654 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 BTBD6Q96KE9 485 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 CEP63Q96MT8 703 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 SLC30A3Q99726 388 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 BRD7Q9NPI1 651 aa6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGB3P12-201ENST00000438745 KCNH4Q9UQ05 1017 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms