RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 ZNF652Q9Y2D9 606 aa27.18■■□□□ 1.94
GTF3A-203ENST00000435781 BRCA1P38398 1863 aaKnown RBP27.18■■□□□ 1.94
GTF3A-203ENST00000435781 SERPINB2P05120 415 aa27.17■■□□□ 1.94
GTF3A-203ENST00000435781 C8orf58Q8NAV2 365 aa27.17■■□□□ 1.94
GTF3A-203ENST00000435781 PXDNLA1KZ92 1463 aa27.17■■□□□ 1.94
GTF3A-203ENST00000435781 ANKRD31Q8N7Z5 1873 aa27.17■■□□□ 1.94
GTF3A-203ENST00000435781 KIF6Q6ZMV9 814 aa27.16■■□□□ 1.94
GTF3A-203ENST00000435781 DDX21Q9NR30 783 aaKnown RBP eCLIP27.16■■□□□ 1.94
GTF3A-203ENST00000435781 CARMIL3Q8ND23 1372 aa27.16■■□□□ 1.94
GTF3A-203ENST00000435781 MAP3K15Q6ZN16 1313 aa27.16■■□□□ 1.94
GTF3A-203ENST00000435781 DCAF8L1A6NGE4 600 aa27.15■■□□□ 1.94
GTF3A-203ENST00000435781 ELL2O00472 640 aaPredicted RBP27.15■■□□□ 1.94
GTF3A-203ENST00000435781 HLFQ16534 295 aa27.15■■□□□ 1.94
GTF3A-203ENST00000435781 CHPF2Q9P2E5 772 aa27.15■■□□□ 1.94
GTF3A-203ENST00000435781 ANKRD36CQ5JPF3 1778 aa27.14■■□□□ 1.94
GTF3A-203ENST00000435781 ERVV-1B6SEH8 477 aa27.14■■□□□ 1.94
GTF3A-203ENST00000435781 SETDB2Q96T68 719 aa27.14■■□□□ 1.94
GTF3A-203ENST00000435781 FANCIQ9NVI1 1328 aa27.14■■□□□ 1.93
GTF3A-203ENST00000435781 TSPYL6Q8N831 410 aa27.13■■□□□ 1.93
GTF3A-203ENST00000435781 ZNF521Q96K83 1311 aa27.13■■□□□ 1.93
GTF3A-203ENST00000435781 TGFB2P61812 414 aa27.12■■□□□ 1.93
GTF3A-203ENST00000435781 ZBTB3Q9H5J0 574 aa27.12■■□□□ 1.93
GTF3A-203ENST00000435781 DBF4Q9UBU7 674 aaPredicted RBP27.12■■□□□ 1.93
GTF3A-203ENST00000435781 CACNA1FO60840 1977 aa27.11■■□□□ 1.93
GTF3A-203ENST00000435781 SPINK5Q9NQ38 1064 aaPredicted RBP27.11■■□□□ 1.93
GTF3A-203ENST00000435781 CHD4Q14839 1912 aa27.11■■□□□ 1.93
GTF3A-203ENST00000435781 DLEC1Q9Y238 1755 aa27.11■■□□□ 1.93
GTF3A-203ENST00000435781 GPR162Q16538 588 aa27.1■■□□□ 1.93
GTF3A-203ENST00000435781 COPS6Q7L5N1 327 aa27.1■■□□□ 1.93
GTF3A-203ENST00000435781 PELP1Q8IZL8 1130 aaKnown RBP27.1■■□□□ 1.93
GTF3A-203ENST00000435781 XAGE3Q8WTP9 111 aa27.1■■□□□ 1.93
GTF3A-203ENST00000435781 NIP7Q9Y221 180 aaKnown RBP eCLIP27.1■■□□□ 1.93
GTF3A-203ENST00000435781 UTRNP46939 3433 aa27.09■■□□□ 1.93
GTF3A-203ENST00000435781 ATP10DQ9P241 1426 aa27.09■■□□□ 1.93
GTF3A-203ENST00000435781 ARFGEF2Q9Y6D5 1785 aa27.08■■□□□ 1.93
GTF3A-203ENST00000435781 A0A0G2JLW4 131 aa27.08■■□□□ 1.93
GTF3A-203ENST00000435781 DPEP1P16444 411 aa27.08■■□□□ 1.93
GTF3A-203ENST00000435781 AIMP1Q12904 312 aaKnown RBP27.08■■□□□ 1.93
GTF3A-203ENST00000435781 YBX3P16989 372 aaKnown RBP eCLIP27.07■■□□□ 1.921e-8■■■□□ 14.6
GTF3A-203ENST00000435781 PRR5LQ6MZQ0 368 aa27.07■■□□□ 1.92
GTF3A-203ENST00000435781 GIGYF2Q6Y7W6 1299 aaKnown RBP27.07■■□□□ 1.92
GTF3A-203ENST00000435781 HYPKQ9NX55 129 aa27.07■■□□□ 1.92
GTF3A-203ENST00000435781 GOLGA2Q08379 1002 aa27.06■■□□□ 1.92
GTF3A-203ENST00000435781 TWISTNBQ3B726 338 aaPredicted RBP27.06■■□□□ 1.92
GTF3A-203ENST00000435781 CNBD1Q8NA66 436 aa27.06■■□□□ 1.92
GTF3A-203ENST00000435781 CHMP4AQ9BY43 222 aa27.06■■□□□ 1.92
GTF3A-203ENST00000435781 MYH16Q9H6N6 1097 aa27.06■■□□□ 1.92
GTF3A-203ENST00000435781 WWC3Q9ULE0 1092 aa27.06■■□□□ 1.92
GTF3A-203ENST00000435781 COL11A2P13942 1736 aaPredicted RBP27.06■■□□□ 1.92
GTF3A-203ENST00000435781 ARFGEF1Q9Y6D6 1849 aa27.06■■□□□ 1.92
GTF3A-203ENST00000435781 CCDC30Q5VVM6 783 aa27.05■■□□□ 1.92
GTF3A-203ENST00000435781 NBPF5PQ86XG9 351 aaPredicted RBP27.05■■□□□ 1.92
GTF3A-203ENST00000435781 KCNA3P22001 575 aa27.04■■□□□ 1.92
GTF3A-203ENST00000435781 CCDC24Q8N4L8 307 aa27.04■■□□□ 1.92
GTF3A-203ENST00000435781 NPHP1O15259 732 aa27.03■■□□□ 1.92
GTF3A-203ENST00000435781 CHRNA5P30532 468 aa27.03■■□□□ 1.92
GTF3A-203ENST00000435781 EXOSC9Q06265 439 aaKnown RBP27.03■■□□□ 1.92
GTF3A-203ENST00000435781 UBN2Q6ZU65 1347 aa27.02■■□□□ 1.92
GTF3A-203ENST00000435781 GPTP24298 496 aa27.02■■□□□ 1.92
GTF3A-203ENST00000435781 ZNF34Q8IZ26 560 aa27.02■■□□□ 1.92
GTF3A-203ENST00000435781 FAM177BA6PVY3 158 aa27.01■■□□□ 1.91
GTF3A-203ENST00000435781 ST5P78524 1137 aa27.01■■□□□ 1.91
GTF3A-203ENST00000435781 BRIP1Q9BX63 1249 aa27.01■■□□□ 1.91
GTF3A-203ENST00000435781 CACNA1SQ13698 1873 aa27■■□□□ 1.91
GTF3A-203ENST00000435781 TPTE2Q6XPS3 522 aa27■■□□□ 1.91
GTF3A-203ENST00000435781 PLBD2Q8NHP8 589 aa27■■□□□ 1.91
GTF3A-203ENST00000435781 PHAXQ9H814 394 aaKnown RBP27■■□□□ 1.91
GTF3A-203ENST00000435781 IBTKQ9P2D0 1353 aaPredicted RBP26.99■■□□□ 1.91
GTF3A-203ENST00000435781 ANKRD13DQ6ZTN6 518 aa26.99■■□□□ 1.91
GTF3A-203ENST00000435781 TNRC6CQ9HCJ0 1690 aaKnown RBP26.98■■□□□ 1.91
GTF3A-203ENST00000435781 TCERG1O14776 1098 aaKnown RBP26.98■■□□□ 1.91
GTF3A-203ENST00000435781 GRIN3BO60391 1043 aa26.98■■□□□ 1.91
GTF3A-203ENST00000435781 VAMP4O75379 141 aa26.98■■□□□ 1.91
GTF3A-203ENST00000435781 PDE6BP35913 854 aa26.98■■□□□ 1.91
GTF3A-203ENST00000435781 HSP90AB3PQ58FF7 597 aa26.98■■□□□ 1.91
GTF3A-203ENST00000435781 C2CD5Q86YS7 1000 aa26.98■■□□□ 1.91
GTF3A-203ENST00000435781 STK31Q9BXU1 1019 aa26.98■■□□□ 1.91
GTF3A-203ENST00000435781 PIM2Q9P1W9 311 aa26.98■■□□□ 1.91
GTF3A-203ENST00000435781 TCIRG1Q13488 830 aa26.97■■□□□ 1.91
GTF3A-203ENST00000435781 PARP10Q53GL7 1025 aa26.97■■□□□ 1.91
GTF3A-203ENST00000435781 NYXQ9GZU5 481 aa26.97■■□□□ 1.91
GTF3A-203ENST00000435781 BCS1LQ9Y276 419 aa26.97■■□□□ 1.91
GTF3A-203ENST00000435781 E9PSI1 815 aa26.96■■□□□ 1.91
GTF3A-203ENST00000435781 H0YIN7 160 aa26.96■■□□□ 1.91
GTF3A-203ENST00000435781 SUSD4Q5VX71 490 aa26.96■■□□□ 1.91
GTF3A-203ENST00000435781 PDZRN3Q9UPQ7 1066 aa26.95■■□□□ 1.9
GTF3A-203ENST00000435781 ABCC12Q96J65 1359 aa26.95■■□□□ 1.9
GTF3A-203ENST00000435781 NTSR2O95665 410 aa26.94■■□□□ 1.9
GTF3A-203ENST00000435781 GTF2E1P29083 439 aaPredicted RBP26.94■■□□□ 1.9
GTF3A-203ENST00000435781 SLFN5Q08AF3 891 aa26.94■■□□□ 1.9
GTF3A-203ENST00000435781 DALRD3Q5D0E6 543 aaKnown RBP26.94■■□□□ 1.9
GTF3A-203ENST00000435781 NUTM1Q86Y26 1132 aa26.94■■□□□ 1.9
GTF3A-203ENST00000435781 PPP1R42Q7Z4L9 355 aa26.93■■□□□ 1.9
GTF3A-203ENST00000435781 CDCA7LQ96GN5 454 aa26.93■■□□□ 1.9
GTF3A-203ENST00000435781 RIC1Q4ADV7 1423 aa26.92■■□□□ 1.9
GTF3A-203ENST00000435781 SLC4A2P04920 1241 aa26.92■■□□□ 1.9
GTF3A-203ENST00000435781 ERFEQ4G0M1 354 aa26.92■■□□□ 1.9
GTF3A-203ENST00000435781 RIC3Q7Z5B4 369 aa26.92■■□□□ 1.9
GTF3A-203ENST00000435781 NLRP10Q86W26 655 aa26.92■■□□□ 1.9
GTF3A-203ENST00000435781 LAMB2P55268 1798 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms