RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
CDCA4P4-201ENST00000435216 C16orf71Q8IYS4 520 aaPredicted RBP17.35■□□□□ 0.37
CDCA4P4-201ENST00000435216 NGEFQ8N5V2 710 aa17.35■□□□□ 0.37
CDCA4P4-201ENST00000435216 TNRC6CQ9HCJ0 1690 aaKnown RBP17.35■□□□□ 0.37
CDCA4P4-201ENST00000435216 FAM177BA6PVY3 158 aa17.34■□□□□ 0.37
CDCA4P4-201ENST00000435216 NBPF5PQ86XG9 351 aaPredicted RBP17.34■□□□□ 0.37
CDCA4P4-201ENST00000435216 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
CDCA4P4-201ENST00000435216 SLX4Q8IY92 1834 aa17.33■□□□□ 0.37
CDCA4P4-201ENST00000435216 HLFQ16534 295 aa17.33■□□□□ 0.36
CDCA4P4-201ENST00000435216 CLEC4GQ6UXB4 293 aa17.33■□□□□ 0.36
CDCA4P4-201ENST00000435216 NIP7Q9Y221 180 aaKnown RBP eCLIP17.33■□□□□ 0.36
CDCA4P4-201ENST00000435216 ZNF652Q9Y2D9 606 aa17.33■□□□□ 0.36
CDCA4P4-201ENST00000435216 SRGNP10124 158 aa17.32■□□□□ 0.36
CDCA4P4-201ENST00000435216 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
CDCA4P4-201ENST00000435216 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
CDCA4P4-201ENST00000435216 FER1L6Q2WGJ9 1857 aa17.32■□□□□ 0.36
CDCA4P4-201ENST00000435216 EIF4A1P60842 406 aaKnown RBP17.31■□□□□ 0.36
CDCA4P4-201ENST00000435216 PRPF40BQ6NWY9 871 aaKnown RBP17.31■□□□□ 0.36
CDCA4P4-201ENST00000435216 RBM46Q8TBY0 533 aaKnown RBP17.31■□□□□ 0.36
CDCA4P4-201ENST00000435216 RRP7AQ9Y3A4 280 aaKnown RBP17.31■□□□□ 0.36
CDCA4P4-201ENST00000435216 MYL6BP14649 208 aa17.3■□□□□ 0.36
CDCA4P4-201ENST00000435216 APLP1P51693 650 aa17.3■□□□□ 0.36
CDCA4P4-201ENST00000435216 HTRA3P83110 453 aa17.3■□□□□ 0.36
CDCA4P4-201ENST00000435216 STYK1Q6J9G0 422 aa17.3■□□□□ 0.36
CDCA4P4-201ENST00000435216 PNISRQ8TF01 805 aaKnown RBP17.3■□□□□ 0.36
CDCA4P4-201ENST00000435216 ARFGEF2Q9Y6D5 1785 aa17.3■□□□□ 0.36
CDCA4P4-201ENST00000435216 ZC3H4Q9UPT8 1303 aaKnown RBP17.29■□□□□ 0.36
CDCA4P4-201ENST00000435216 GLTPD2A6NH11 291 aa17.29■□□□□ 0.36
CDCA4P4-201ENST00000435216 RALBP1Q15311 655 aa17.29■□□□□ 0.36
CDCA4P4-201ENST00000435216 CNKSR1Q969H4 720 aa17.29■□□□□ 0.36
CDCA4P4-201ENST00000435216 MASTLQ96GX5 879 aa17.29■□□□□ 0.36
CDCA4P4-201ENST00000435216 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
CDCA4P4-201ENST00000435216 WDR90Q96KV7 1748 aa17.28■□□□□ 0.36
CDCA4P4-201ENST00000435216 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
CDCA4P4-201ENST00000435216 TTLL7Q6ZT98 887 aa17.28■□□□□ 0.36
CDCA4P4-201ENST00000435216 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.36
CDCA4P4-201ENST00000435216 NUP98P52948 1817 aa17.27■□□□□ 0.36
CDCA4P4-201ENST00000435216 RIPK4P57078 832 aa17.27■□□□□ 0.36
CDCA4P4-201ENST00000435216 ERFEQ4G0M1 354 aa17.27■□□□□ 0.36
CDCA4P4-201ENST00000435216 TAOK3Q9H2K8 898 aa17.27■□□□□ 0.36
CDCA4P4-201ENST00000435216 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
CDCA4P4-201ENST00000435216 NUTM1Q86Y26 1132 aa17.26■□□□□ 0.35
CDCA4P4-201ENST00000435216 CCDC146Q8IYE0 955 aa17.26■□□□□ 0.35
CDCA4P4-201ENST00000435216 ZBTB3Q9H5J0 574 aa17.26■□□□□ 0.35
CDCA4P4-201ENST00000435216 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
CDCA4P4-201ENST00000435216 MAP3K15Q6ZN16 1313 aa17.25■□□□□ 0.35
CDCA4P4-201ENST00000435216 VEGFAP15692 232 aaPredicted RBP17.25■□□□□ 0.35
CDCA4P4-201ENST00000435216 NPR1P16066 1061 aa17.25■□□□□ 0.35
CDCA4P4-201ENST00000435216 GPTP24298 496 aa17.25■□□□□ 0.35
CDCA4P4-201ENST00000435216 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
CDCA4P4-201ENST00000435216 FSTL1Q12841 308 aa17.25■□□□□ 0.35
CDCA4P4-201ENST00000435216 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
CDCA4P4-201ENST00000435216 DNAJC5GQ8N7S2 189 aa17.25■□□□□ 0.35
CDCA4P4-201ENST00000435216 ABCC12Q96J65 1359 aa17.25■□□□□ 0.35
CDCA4P4-201ENST00000435216 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
CDCA4P4-201ENST00000435216 LTBP3Q9NS15 1303 aa17.24■□□□□ 0.35
CDCA4P4-201ENST00000435216 KLRG2A4D1S0 409 aaPredicted RBP17.24■□□□□ 0.35
CDCA4P4-201ENST00000435216 POTECB2RU33 542 aa17.24■□□□□ 0.35
CDCA4P4-201ENST00000435216 RGL2O15211 777 aa17.24■□□□□ 0.35
CDCA4P4-201ENST00000435216 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
CDCA4P4-201ENST00000435216 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
CDCA4P4-201ENST00000435216 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
CDCA4P4-201ENST00000435216 ERVV-1B6SEH8 477 aa17.23■□□□□ 0.35
CDCA4P4-201ENST00000435216 EIF2S2P20042 333 aaKnown RBP17.23■□□□□ 0.35
CDCA4P4-201ENST00000435216 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
CDCA4P4-201ENST00000435216 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
CDCA4P4-201ENST00000435216 UBN2Q6ZU65 1347 aa17.22■□□□□ 0.35
CDCA4P4-201ENST00000435216 ANXA1P04083 346 aa17.22■□□□□ 0.35
CDCA4P4-201ENST00000435216 CCDC93Q567U6 631 aa17.22■□□□□ 0.35
CDCA4P4-201ENST00000435216 SOGA3Q5TF21 947 aa17.22■□□□□ 0.35
CDCA4P4-201ENST00000435216 NECTIN2Q92692 538 aa17.22■□□□□ 0.35
CDCA4P4-201ENST00000435216 DDNO94850 711 aaPredicted RBP17.21■□□□□ 0.35
CDCA4P4-201ENST00000435216 PROSER3Q2NL68 480 aa17.21■□□□□ 0.35
CDCA4P4-201ENST00000435216 PDIA6Q15084 440 aa17.2■□□□□ 0.34
CDCA4P4-201ENST00000435216 SUSD4Q5VX71 490 aa17.2■□□□□ 0.34
CDCA4P4-201ENST00000435216 NYXQ9GZU5 481 aa17.2■□□□□ 0.34
CDCA4P4-201ENST00000435216 ZNF277Q9NRM2 450 aaPredicted RBP17.2■□□□□ 0.34
CDCA4P4-201ENST00000435216 KRT24Q2M2I5 525 aa17.19■□□□□ 0.34
CDCA4P4-201ENST00000435216 LRP10Q7Z4F1 713 aa17.19■□□□□ 0.34
CDCA4P4-201ENST00000435216 SLC51AQ86UW1 340 aa17.19■□□□□ 0.34
CDCA4P4-201ENST00000435216 LAS1LQ9Y4W2 734 aaKnown RBP17.19■□□□□ 0.34
CDCA4P4-201ENST00000435216 ALDH1B1P30837 517 aa17.18■□□□□ 0.34
CDCA4P4-201ENST00000435216 FKBP4Q02790 459 aaKnown RBP eCLIP17.18■□□□□ 0.34
CDCA4P4-201ENST00000435216 LMOD3Q0VAK6 560 aa17.18■□□□□ 0.34
CDCA4P4-201ENST00000435216 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
CDCA4P4-201ENST00000435216 GIGYF2Q6Y7W6 1299 aaKnown RBP17.18■□□□□ 0.34
CDCA4P4-201ENST00000435216 ZNF34Q8IZ26 560 aa17.18■□□□□ 0.34
CDCA4P4-201ENST00000435216 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
CDCA4P4-201ENST00000435216 NTSR2O95665 410 aa17.17■□□□□ 0.34
CDCA4P4-201ENST00000435216 POTEIP0CG38 1075 aa17.17■□□□□ 0.34
CDCA4P4-201ENST00000435216 POTEJP0CG39 1038 aa17.17■□□□□ 0.34
CDCA4P4-201ENST00000435216 CRY2Q49AN0 593 aa17.17■□□□□ 0.34
CDCA4P4-201ENST00000435216 C3orf67Q6ZVT6 689 aa17.17■□□□□ 0.34
CDCA4P4-201ENST00000435216 KLRG1Q96E93 195 aa17.17■□□□□ 0.34
CDCA4P4-201ENST00000435216 ADAMTS8Q9UP79 889 aa17.17■□□□□ 0.34
CDCA4P4-201ENST00000435216 TRIM35Q9UPQ4 493 aa17.17■□□□□ 0.34
CDCA4P4-201ENST00000435216 TCERG1O14776 1098 aaKnown RBP17.16■□□□□ 0.34
CDCA4P4-201ENST00000435216 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
CDCA4P4-201ENST00000435216 RPGRQ92834 1020 aaKnown RBP17.16■□□□□ 0.34
CDCA4P4-201ENST00000435216 RUNDC1Q96C34 613 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms