RNA–Protein interactions for RNA: ENST00000435061.1

SREBF2-203, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 3

Gene SREBF2, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-203ENST00000435061 RASSF7Q02833 373 aa22.74■■□□□ 1.23
SREBF2-203ENST00000435061 STYK1Q6J9G0 422 aa22.74■■□□□ 1.23
SREBF2-203ENST00000435061 TPTE2Q6XPS3 522 aa22.74■■□□□ 1.23
SREBF2-203ENST00000435061 CNKSR1Q969H4 720 aa22.74■■□□□ 1.23
SREBF2-203ENST00000435061 SRGNP10124 158 aa22.73■■□□□ 1.23
SREBF2-203ENST00000435061 LMOD3Q0VAK6 560 aa22.73■■□□□ 1.23
SREBF2-203ENST00000435061 BABAM1Q9NWV8 329 aa22.73■■□□□ 1.23
SREBF2-203ENST00000435061 NIP7Q9Y221 180 aaKnown RBP eCLIP22.73■■□□□ 1.23
SREBF2-203ENST00000435061 ANKRD31Q8N7Z5 1873 aa22.73■■□□□ 1.23
SREBF2-203ENST00000435061 CEP350Q5VT06 3117 aa22.72■■□□□ 1.23
SREBF2-203ENST00000435061 KDM3BQ7LBC6 1761 aa22.72■■□□□ 1.23
SREBF2-203ENST00000435061 ERVV-1B6SEH8 477 aa22.72■■□□□ 1.23
SREBF2-203ENST00000435061 TMPOP42166 694 aaKnown RBP22.72■■□□□ 1.23
SREBF2-203ENST00000435061 MASTLQ96GX5 879 aa22.72■■□□□ 1.23
SREBF2-203ENST00000435061 SBF1O95248 1867 aa22.72■■□□□ 1.23
SREBF2-203ENST00000435061 NFKBIEO00221 500 aa22.71■■□□□ 1.23
SREBF2-203ENST00000435061 TSPYL4Q9UJ04 414 aa22.71■■□□□ 1.23
SREBF2-203ENST00000435061 C21orf2O43822 256 aa22.7■■□□□ 1.22
SREBF2-203ENST00000435061 HLFQ16534 295 aa22.7■■□□□ 1.22
SREBF2-203ENST00000435061 ERBB4Q15303 1308 aa22.7■■□□□ 1.22
SREBF2-203ENST00000435061 LAMB4A4D0S4 1761 aa22.69■■□□□ 1.22
SREBF2-203ENST00000435061 KLRG2A4D1S0 409 aaPredicted RBP22.69■■□□□ 1.22
SREBF2-203ENST00000435061 PRELPP51888 382 aa22.69■■□□□ 1.22
SREBF2-203ENST00000435061 SOGA3Q5TF21 947 aa22.69■■□□□ 1.22
SREBF2-203ENST00000435061 C16orf71Q8IYS4 520 aaPredicted RBP22.69■■□□□ 1.22
SREBF2-203ENST00000435061 NGEFQ8N5V2 710 aa22.69■■□□□ 1.22
SREBF2-203ENST00000435061 RBM46Q8TBY0 533 aaKnown RBP22.69■■□□□ 1.22
SREBF2-203ENST00000435061 RRP7AQ9Y3A4 280 aaKnown RBP22.69■■□□□ 1.22
SREBF2-203ENST00000435061 MAP3K15Q6ZN16 1313 aa22.68■■□□□ 1.22
SREBF2-203ENST00000435061 KIF6Q6ZMV9 814 aa22.68■■□□□ 1.22
SREBF2-203ENST00000435061 NPR1P16066 1061 aa22.67■■□□□ 1.22
SREBF2-203ENST00000435061 WDR43Q15061 677 aaKnown RBP eCLIP22.67■■□□□ 1.221e-7■■■■■ 35
SREBF2-203ENST00000435061 PRPF40BQ6NWY9 871 aaKnown RBP22.67■■□□□ 1.22
SREBF2-203ENST00000435061 RRAGCQ9HB90 399 aa22.67■■□□□ 1.22
SREBF2-203ENST00000435061 ZNF219Q9P2Y4 722 aaPredicted RBP22.67■■□□□ 1.22
SREBF2-203ENST00000435061 COL11A2P13942 1736 aaPredicted RBP22.66■■□□□ 1.22
SREBF2-203ENST00000435061 LTBP3Q9NS15 1303 aa22.66■■□□□ 1.22
SREBF2-203ENST00000435061 GLTPD2A6NH11 291 aa22.66■■□□□ 1.22
SREBF2-203ENST00000435061 MYL6BP14649 208 aa22.66■■□□□ 1.22
SREBF2-203ENST00000435061 RUNDC1Q96C34 613 aa22.66■■□□□ 1.22
SREBF2-203ENST00000435061 GTF2E1P29083 439 aaPredicted RBP22.65■■□□□ 1.22
SREBF2-203ENST00000435061 TTLL7Q6ZT98 887 aa22.65■■□□□ 1.22
SREBF2-203ENST00000435061 NYXQ9GZU5 481 aa22.65■■□□□ 1.22
SREBF2-203ENST00000435061 TAOK3Q9H2K8 898 aa22.65■■□□□ 1.22
SREBF2-203ENST00000435061 FAM177BA6PVY3 158 aa22.64■■□□□ 1.21
SREBF2-203ENST00000435061 APLP1P51693 650 aa22.64■■□□□ 1.21
SREBF2-203ENST00000435061 CCDC146Q8IYE0 955 aa22.64■■□□□ 1.21
SREBF2-203ENST00000435061 FSTL1Q12841 308 aa22.63■■□□□ 1.21
SREBF2-203ENST00000435061 C7orf43Q8WVR3 580 aa22.63■■□□□ 1.21
SREBF2-203ENST00000435061 PRKRIP1Q9H875 184 aaPredicted RBP22.63■■□□□ 1.21
SREBF2-203ENST00000435061 ADAMTS8Q9UP79 889 aa22.63■■□□□ 1.21
SREBF2-203ENST00000435061 NEUROD2Q15784 382 aa22.62■■□□□ 1.21
SREBF2-203ENST00000435061 ERFEQ4G0M1 354 aa22.62■■□□□ 1.21
SREBF2-203ENST00000435061 DPY19L2Q6NUT2 758 aa22.62■■□□□ 1.21
SREBF2-203ENST00000435061 SLX4Q8IY92 1834 aa22.61■■□□□ 1.21
SREBF2-203ENST00000435061 CHL1O00533 1208 aa22.61■■□□□ 1.21
SREBF2-203ENST00000435061 VEGFAP15692 232 aaPredicted RBP22.61■■□□□ 1.21
SREBF2-203ENST00000435061 EIF2S2P20042 333 aaKnown RBP22.61■■□□□ 1.21
SREBF2-203ENST00000435061 ALDH1B1P30837 517 aa22.61■■□□□ 1.21
SREBF2-203ENST00000435061 ZBTB3Q9H5J0 574 aa22.61■■□□□ 1.21
SREBF2-203ENST00000435061 PDIA6Q15084 440 aa22.6■■□□□ 1.21
SREBF2-203ENST00000435061 CCDC93Q567U6 631 aa22.6■■□□□ 1.21
SREBF2-203ENST00000435061 GIGYF2Q6Y7W6 1299 aaKnown RBP22.6■■□□□ 1.21
SREBF2-203ENST00000435061 LRP10Q7Z4F1 713 aa22.6■■□□□ 1.21
SREBF2-203ENST00000435061 TRIM35Q9UPQ4 493 aa22.6■■□□□ 1.21
SREBF2-203ENST00000435061 TNRC6CQ9HCJ0 1690 aaKnown RBP22.6■■□□□ 1.21
SREBF2-203ENST00000435061 IBTKQ9P2D0 1353 aaPredicted RBP22.6■■□□□ 1.21
SREBF2-203ENST00000435061 FER1L6Q2WGJ9 1857 aa22.6■■□□□ 1.21
SREBF2-203ENST00000435061 CRY2Q49AN0 593 aa22.59■■□□□ 1.21
SREBF2-203ENST00000435061 ZNF34Q8IZ26 560 aa22.59■■□□□ 1.21
SREBF2-203ENST00000435061 NUTM1Q86Y26 1132 aa22.58■■□□□ 1.21
SREBF2-203ENST00000435061 UBN2Q6ZU65 1347 aa22.57■■□□□ 1.2
SREBF2-203ENST00000435061 GPTP24298 496 aa22.57■■□□□ 1.2
SREBF2-203ENST00000435061 PARP10Q53GL7 1025 aa22.57■■□□□ 1.2
SREBF2-203ENST00000435061 SUSD4Q5VX71 490 aa22.57■■□□□ 1.2
SREBF2-203ENST00000435061 RTKN2Q8IZC4 609 aa22.57■■□□□ 1.2
SREBF2-203ENST00000435061 SMC1BQ8NDV3 1235 aa22.57■■□□□ 1.2
SREBF2-203ENST00000435061 ARFGEF2Q9Y6D5 1785 aa22.57■■□□□ 1.2
SREBF2-203ENST00000435061 CCDC88AQ3V6T2 1871 aa22.57■■□□□ 1.2
SREBF2-203ENST00000435061 NUP98P52948 1817 aa22.57■■□□□ 1.2
SREBF2-203ENST00000435061 ABCC12Q96J65 1359 aa22.56■■□□□ 1.2
SREBF2-203ENST00000435061 PPP1R42Q7Z4L9 355 aa22.56■■□□□ 1.2
SREBF2-203ENST00000435061 RIC1Q4ADV7 1423 aa22.56■■□□□ 1.2
SREBF2-203ENST00000435061 FKBP4Q02790 459 aaKnown RBP eCLIP22.55■■□□□ 1.23e-6■■■□□ 15
SREBF2-203ENST00000435061 PROSER3Q2NL68 480 aa22.55■■□□□ 1.2
SREBF2-203ENST00000435061 TIAM2Q8IVF5 1701 aa22.54■■□□□ 1.2
SREBF2-203ENST00000435061 HOXA10P31260 410 aaPredicted RBP22.54■■□□□ 1.2
SREBF2-203ENST00000435061 LAS1LQ9Y4W2 734 aaKnown RBP22.54■■□□□ 1.2
SREBF2-203ENST00000435061 DICER1Q9UPY3 1922 aaKnown RBP22.53■■□□□ 1.2
SREBF2-203ENST00000435061 POTECB2RU33 542 aa22.53■■□□□ 1.2
SREBF2-203ENST00000435061 NTSR2O95665 410 aa22.53■■□□□ 1.2
SREBF2-203ENST00000435061 HOXB7P09629 217 aa22.53■■□□□ 1.2
SREBF2-203ENST00000435061 HSP90AB3PQ58FF7 597 aa22.53■■□□□ 1.2
SREBF2-203ENST00000435061 COPS6Q7L5N1 327 aa22.53■■□□□ 1.2
SREBF2-203ENST00000435061 RPGRQ92834 1020 aaKnown RBP22.53■■□□□ 1.2
SREBF2-203ENST00000435061 DDX21Q9NR30 783 aaKnown RBP eCLIP22.53■■□□□ 1.2
SREBF2-203ENST00000435061 ANXA1P04083 346 aa22.52■■□□□ 1.2
SREBF2-203ENST00000435061 CC2D2BQ6DHV5 1058 aa22.52■■□□□ 1.2
SREBF2-203ENST00000435061 NECTIN2Q92692 538 aa22.52■■□□□ 1.2
SREBF2-203ENST00000435061 CFAP44Q96MT7 982 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms