RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 GJB2P29033 226 aa12.55□□□□□ -0.4
SCAF4-203ENST00000434667 OS9Q13438 667 aaPredicted RBP12.55□□□□□ -0.4
SCAF4-203ENST00000434667 SMC3Q9UQE7 1217 aa12.55□□□□□ -0.4
SCAF4-203ENST00000434667 CCDC9Q9Y3X0 531 aaKnown RBP12.55□□□□□ -0.4
SCAF4-203ENST00000434667 PTH1RQ03431 593 aa12.54□□□□□ -0.4
SCAF4-203ENST00000434667 STK3Q13188 491 aa12.54□□□□□ -0.4
SCAF4-203ENST00000434667 ARID5BQ14865 1188 aa12.54□□□□□ -0.4
SCAF4-203ENST00000434667 GLI3P10071 1580 aa12.54□□□□□ -0.4
SCAF4-203ENST00000434667 FLIIQ13045 1269 aa12.54□□□□□ -0.4
SCAF4-203ENST00000434667 PRPF40BQ6NWY9 871 aaKnown RBP12.54□□□□□ -0.4
SCAF4-203ENST00000434667 CCDC186Q7Z3E2 898 aa12.53□□□□□ -0.4
SCAF4-203ENST00000434667 TAF6LQ9Y6J9 622 aa12.53□□□□□ -0.4
SCAF4-203ENST00000434667 SALL3Q9BXA9 1300 aa12.53□□□□□ -0.4
SCAF4-203ENST00000434667 ADAMTSL3P82987 1691 aa12.53□□□□□ -0.4
SCAF4-203ENST00000434667 F13A1P00488 732 aa12.53□□□□□ -0.4
SCAF4-203ENST00000434667 CEBPZQ03701 1054 aaKnown RBP12.53□□□□□ -0.4
SCAF4-203ENST00000434667 ERCC4Q92889 916 aaPredicted RBP12.53□□□□□ -0.4
SCAF4-203ENST00000434667 NFAT5O94916 1531 aa12.53□□□□□ -0.4
SCAF4-203ENST00000434667 KIAA1524Q8TCG1 905 aa12.53□□□□□ -0.4
SCAF4-203ENST00000434667 WASLO00401 505 aaPredicted RBP12.52□□□□□ -0.4
SCAF4-203ENST00000434667 PHF14O94880 888 aa12.52□□□□□ -0.4
SCAF4-203ENST00000434667 USHBP1Q8N6Y0 703 aa12.52□□□□□ -0.4
SCAF4-203ENST00000434667 RTF1Q92541 710 aaKnown RBP12.52□□□□□ -0.4
SCAF4-203ENST00000434667 DDX11Q96FC9 970 aa12.52□□□□□ -0.4
SCAF4-203ENST00000434667 JAKMIP1Q96N16 626 aaKnown RBP12.52□□□□□ -0.4
SCAF4-203ENST00000434667 OSBPL3Q9H4L5 887 aa12.52□□□□□ -0.4
SCAF4-203ENST00000434667 MST1RQ04912 1400 aa12.52□□□□□ -0.41
SCAF4-203ENST00000434667 PPP1R42Q7Z4L9 355 aa12.52□□□□□ -0.41
SCAF4-203ENST00000434667 MAP3K19Q56UN5 1328 aa12.52□□□□□ -0.41
SCAF4-203ENST00000434667 HSPA4P34932 840 aa12.52□□□□□ -0.41
SCAF4-203ENST00000434667 FGD1P98174 961 aa12.52□□□□□ -0.41
SCAF4-203ENST00000434667 SOS1Q07889 1333 aaPredicted RBP12.52□□□□□ -0.41
SCAF4-203ENST00000434667 NBPF7P0C2Y1 421 aaPredicted RBP12.51□□□□□ -0.41
SCAF4-203ENST00000434667 ST3GAL1Q11201 340 aa12.51□□□□□ -0.41
SCAF4-203ENST00000434667 UBE2HP62256 183 aa12.51□□□□□ -0.41
SCAF4-203ENST00000434667 CDC37L1Q7L3B6 337 aa12.51□□□□□ -0.41
SCAF4-203ENST00000434667 INTS4Q96HW7 963 aaKnown RBP12.51□□□□□ -0.41
SCAF4-203ENST00000434667 STK31Q9BXU1 1019 aa12.51□□□□□ -0.41
SCAF4-203ENST00000434667 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
SCAF4-203ENST00000434667 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
SCAF4-203ENST00000434667 ERICH4A6NGS2 130 aa12.51□□□□□ -0.41
SCAF4-203ENST00000434667 NPM1P06748 294 aaKnown RBP eCLIP12.51□□□□□ -0.41
SCAF4-203ENST00000434667 TTC6Q86TZ1 520 aa12.51□□□□□ -0.41
SCAF4-203ENST00000434667 PA2G4Q9UQ80 394 aaKnown RBP12.51□□□□□ -0.41
SCAF4-203ENST00000434667 PLEKHG1Q9ULL1 1385 aa12.51□□□□□ -0.41
SCAF4-203ENST00000434667 SRGAP3O43295 1099 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 CHGBP05060 677 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
SCAF4-203ENST00000434667 ATP8B2P98198 1209 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 PRIMPOLQ96LW4 560 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 PRR36Q9H6K5 1346 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 MCM2P49736 904 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 MTMR6Q9Y217 621 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.5□□□□□ -0.41
SCAF4-203ENST00000434667 PTPRCP08575 1304 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 ME3Q16798 604 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 MTERF4Q7Z6M4 381 aaKnown RBP12.5□□□□□ -0.41
SCAF4-203ENST00000434667 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 FUCA2Q9BTY2 467 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 ST7Q9NRC1 585 aa12.5□□□□□ -0.41
SCAF4-203ENST00000434667 CGNQ9P2M7 1197 aaKnown RBP12.5□□□□□ -0.41
SCAF4-203ENST00000434667 CYB5RLQ6IPT4 315 aa12.49□□□□□ -0.41
SCAF4-203ENST00000434667 UBTFL1P0CB47 393 aaPredicted RBP12.49□□□□□ -0.41
SCAF4-203ENST00000434667 CCT4P50991 539 aaKnown RBP12.49□□□□□ -0.41
SCAF4-203ENST00000434667 ANO6Q4KMQ2 910 aa12.49□□□□□ -0.41
SCAF4-203ENST00000434667 LSG1Q9H089 658 aaKnown RBP12.49□□□□□ -0.41
SCAF4-203ENST00000434667 NDUFB9Q9Y6M9 179 aa12.49□□□□□ -0.41
SCAF4-203ENST00000434667 KIF24Q5T7B8 1368 aa12.49□□□□□ -0.41
SCAF4-203ENST00000434667 USP27XA6NNY8 438 aa12.49□□□□□ -0.41
SCAF4-203ENST00000434667 TTC14Q96N46 770 aa12.49□□□□□ -0.41
SCAF4-203ENST00000434667 SPTLC3Q9NUV7 552 aa12.49□□□□□ -0.41
SCAF4-203ENST00000434667 TRMT1Q9NXH9 659 aaKnown RBP12.49□□□□□ -0.41
SCAF4-203ENST00000434667 DACT1Q9NYF0 836 aa12.49□□□□□ -0.41
SCAF4-203ENST00000434667 LIMCH1Q9UPQ0 1083 aa12.49□□□□□ -0.41
SCAF4-203ENST00000434667 SGSM2O43147 1006 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 TNNT3P45378 269 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-203ENST00000434667 NCBP1Q09161 790 aaKnown RBP12.48□□□□□ -0.41
SCAF4-203ENST00000434667 SKIDA1Q1XH10 827 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 TRIM5Q9C035 493 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 KDRP35968 1356 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 ALS2Q96Q42 1657 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 CEP170BQ9Y4F5 1589 aaPredicted RBP12.48□□□□□ -0.41
SCAF4-203ENST00000434667 VGLL3A8MV65 326 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 PI4K2BQ8TCG2 481 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 ABCC6O95255 1503 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 CRB1P82279 1406 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 CCDC144BQ3MJ40 725 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 CCDC144CPQ8IYA2 1237 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 RHPN1Q8TCX5 695 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 FAM227BQ96M60 508 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 DNAJC25Q9H1X3 360 aa12.48□□□□□ -0.41
SCAF4-203ENST00000434667 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
SCAF4-203ENST00000434667 ROBO2Q9HCK4 1378 aa12.47□□□□□ -0.41
SCAF4-203ENST00000434667 TMEM2Q9UHN6 1383 aa12.47□□□□□ -0.41
SCAF4-203ENST00000434667 FAM184AQ8NB25 1140 aa12.47□□□□□ -0.41
SCAF4-203ENST00000434667 PDRG1Q9NUG6 133 aa12.47□□□□□ -0.41
SCAF4-203ENST00000434667 HYPKQ9NX55 129 aa12.47□□□□□ -0.41
SCAF4-203ENST00000434667 MRVI1Q9Y6F6 885 aa12.47□□□□□ -0.41
SCAF4-203ENST00000434667 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
SCAF4-203ENST00000434667 FTOQ9C0B1 505 aaKnown RBP eCLIP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms