RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MTERF4Q7Z6M4 381 aaKnown RBP9.89□□□□□ -0.83
VTI1A-202ENST00000432306 FTSJ3Q8IY81 847 aaKnown RBP9.89□□□□□ -0.83
VTI1A-202ENST00000432306 SEPT12Q8IYM1 358 aa9.89□□□□□ -0.83
VTI1A-202ENST00000432306 PLEKHF1Q96S99 279 aa9.89□□□□□ -0.83
VTI1A-202ENST00000432306 CHMP4BQ9H444 224 aaKnown RBP9.89□□□□□ -0.83
VTI1A-202ENST00000432306 SUGT1Q9Y2Z0 365 aa9.89□□□□□ -0.83
VTI1A-202ENST00000432306 RGPD1P0DJD0 1748 aa9.89□□□□□ -0.83
VTI1A-202ENST00000432306 KIF1AQ12756 1690 aa9.89□□□□□ -0.83
VTI1A-202ENST00000432306 G3V3G9 751 aa9.88□□□□□ -0.83
VTI1A-202ENST00000432306 GOLGA6L22H0YM25 854 aa9.88□□□□□ -0.83
VTI1A-202ENST00000432306 FOXO3O43524 673 aa9.88□□□□□ -0.83
VTI1A-202ENST00000432306 CFAP70Q5T0N1 1121 aa9.88□□□□□ -0.83
VTI1A-202ENST00000432306 GCC1Q96CN9 775 aa9.88□□□□□ -0.83
VTI1A-202ENST00000432306 L3MBTL3Q96JM7 780 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-202ENST00000432306 DNAJC2Q99543 621 aaKnown RBP9.88□□□□□ -0.83
VTI1A-202ENST00000432306 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
VTI1A-202ENST00000432306 NOL7Q9UMY1 257 aaKnown RBP9.88□□□□□ -0.83
VTI1A-202ENST00000432306 ZNF330Q9Y3S2 320 aaPredicted RBP9.88□□□□□ -0.83
VTI1A-202ENST00000432306 PLCH1Q4KWH8 1693 aa9.88□□□□□ -0.83
VTI1A-202ENST00000432306 PSDA5PKW4 1024 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-202ENST00000432306 CYP2E1P05181 493 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-202ENST00000432306 NASPP49321 788 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-202ENST00000432306 VPS72Q15906 364 aa9.87□□□□□ -0.83
VTI1A-202ENST00000432306 KIAA1211Q6ZU35 1233 aa9.87□□□□□ -0.83
VTI1A-202ENST00000432306 KRT27Q7Z3Y8 459 aa9.87□□□□□ -0.83
VTI1A-202ENST00000432306 MICAL1Q8TDZ2 1067 aa9.87□□□□□ -0.83
VTI1A-202ENST00000432306 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
VTI1A-202ENST00000432306 ADGRF5Q8IZF2 1346 aa9.87□□□□□ -0.83
VTI1A-202ENST00000432306 IPO8O15397 1037 aaKnown RBP9.87□□□□□ -0.83
VTI1A-202ENST00000432306 MTHFSP49914 203 aa9.87□□□□□ -0.83
VTI1A-202ENST00000432306 XPCQ01831 940 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-202ENST00000432306 CHD1LQ86WJ1 897 aa9.87□□□□□ -0.83
VTI1A-202ENST00000432306 GPATCH11Q8N954 259 aa9.87□□□□□ -0.83
VTI1A-202ENST00000432306 ARHGAP45Q92619 1136 aa9.87□□□□□ -0.83
VTI1A-202ENST00000432306 PPLO60437 1756 aa9.86□□□□□ -0.83
VTI1A-202ENST00000432306 SSH1Q8WYL5 1049 aa9.86□□□□□ -0.83
VTI1A-202ENST00000432306 C14orf93Q9H972 538 aaKnown RBP9.86□□□□□ -0.83
VTI1A-202ENST00000432306 SPATA31A3Q5VYP0 1347 aa9.86□□□□□ -0.83
VTI1A-202ENST00000432306 RPGRIP1LQ68CZ1 1315 aa9.86□□□□□ -0.83
VTI1A-202ENST00000432306 HSP90AB1P08238 724 aaKnown RBP9.85□□□□□ -0.83
VTI1A-202ENST00000432306 RIPK4P57078 832 aa9.85□□□□□ -0.83
VTI1A-202ENST00000432306 PDIA6Q15084 440 aa9.85□□□□□ -0.83
VTI1A-202ENST00000432306 ANP32BQ92688 251 aaKnown RBP9.85□□□□□ -0.83
VTI1A-202ENST00000432306 BCL2L13Q9BXK5 485 aa9.85□□□□□ -0.83
VTI1A-202ENST00000432306 SMC4Q9NTJ3 1288 aa9.85□□□□□ -0.83
VTI1A-202ENST00000432306 FMN2Q9NZ56 1722 aa9.85□□□□□ -0.83
VTI1A-202ENST00000432306 KIF24Q5T7B8 1368 aa9.85□□□□□ -0.83
VTI1A-202ENST00000432306 QRICH2Q9H0J4 1663 aa9.85□□□□□ -0.83
VTI1A-202ENST00000432306 BAG4O95429 457 aaKnown RBP9.85□□□□□ -0.83
VTI1A-202ENST00000432306 NUCB2P80303 420 aa9.85□□□□□ -0.83
VTI1A-202ENST00000432306 SPTY2D1Q68D10 685 aaPredicted RBP9.85□□□□□ -0.83
VTI1A-202ENST00000432306 METRNQ9UJH8 293 aa9.85□□□□□ -0.83
VTI1A-202ENST00000432306 RRP7AQ9Y3A4 280 aaKnown RBP9.85□□□□□ -0.83
VTI1A-202ENST00000432306 ABCA3Q99758 1704 aa9.84□□□□□ -0.83
VTI1A-202ENST00000432306 CSB-PGBD3P0DP91 1061 aa9.84□□□□□ -0.83
VTI1A-202ENST00000432306 MCCP23508 829 aa9.84□□□□□ -0.83
VTI1A-202ENST00000432306 MSNP26038 577 aaKnown RBP9.84□□□□□ -0.83
VTI1A-202ENST00000432306 TMPOP42166 694 aaKnown RBP9.84□□□□□ -0.83
VTI1A-202ENST00000432306 EXOSC9Q06265 439 aaKnown RBP9.84□□□□□ -0.83
VTI1A-202ENST00000432306 PARP9Q8IXQ6 854 aa9.84□□□□□ -0.83
VTI1A-202ENST00000432306 TMEM57Q8N5G2 664 aa9.84□□□□□ -0.83
VTI1A-202ENST00000432306 A0A0G2JS52 829 aa9.83□□□□□ -0.84
VTI1A-202ENST00000432306 HMGB1P1B2RPK0 211 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-202ENST00000432306 C7P10643 843 aa9.83□□□□□ -0.84
VTI1A-202ENST00000432306 MCCD1P59942 119 aaPredicted RBP9.83□□□□□ -0.84
VTI1A-202ENST00000432306 ZC3H6P61129 1189 aaKnown RBP9.83□□□□□ -0.84
VTI1A-202ENST00000432306 RABEP1Q15276 862 aa9.83□□□□□ -0.84
VTI1A-202ENST00000432306 SF3A1Q15459 793 aaKnown RBP9.83□□□□□ -0.84
VTI1A-202ENST00000432306 CSPP1Q1MSJ5 1256 aa9.83□□□□□ -0.84
VTI1A-202ENST00000432306 ITPRIPQ8IWB1 547 aa9.83□□□□□ -0.84
VTI1A-202ENST00000432306 PBXIP1Q96AQ6 731 aa9.83□□□□□ -0.84
VTI1A-202ENST00000432306 PRDM4Q9UKN5 801 aa9.83□□□□□ -0.84
VTI1A-202ENST00000432306 KNDC1Q76NI1 1749 aa9.83□□□□□ -0.84
VTI1A-202ENST00000432306 TULP4Q9NRJ4 1543 aa9.83□□□□□ -0.84
VTI1A-202ENST00000432306 DYNC1I1O14576 645 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 CD2BP2O95400 341 aaKnown RBP9.82□□□□□ -0.84
VTI1A-202ENST00000432306 YY1P25490 414 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 AMHR2Q16671 573 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 NOB1Q9ULX3 412 aaKnown RBP9.82□□□□□ -0.84
VTI1A-202ENST00000432306 RGPD8O14715 1765 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-202ENST00000432306 TNS3Q68CZ2 1445 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 SPDYE16A6NNV3 312 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-202ENST00000432306 ZBTB7BO15156 539 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-202ENST00000432306 ERCC3P19447 782 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 PSME1Q06323 249 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 GRIPAP1Q4V328 841 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 TBC1D9Q6ZT07 1266 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 KRT28Q7Z3Y7 464 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 SLC12A5Q9H2X9 1139 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 LMBRD1Q9NUN5 540 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.82□□□□□ -0.84
VTI1A-202ENST00000432306 ZKSCAN5Q9Y2L8 839 aa9.82□□□□□ -0.84
VTI1A-202ENST00000432306 NRAPQ86VF7 1730 aa9.81□□□□□ -0.84
VTI1A-202ENST00000432306 TNS1Q9HBL0 1735 aaKnown RBP9.81□□□□□ -0.84
VTI1A-202ENST00000432306 NUTM2FA1L443 756 aa9.81□□□□□ -0.84
VTI1A-202ENST00000432306 TBC1D12O60347 775 aa9.81□□□□□ -0.84
VTI1A-202ENST00000432306 SSFA2P28290 1259 aa9.81□□□□□ -0.84
VTI1A-202ENST00000432306 EN1Q05925 392 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-202ENST00000432306 R3HDM1Q15032 1099 aaKnown RBP9.81□□□□□ -0.84
VTI1A-202ENST00000432306 SKIV2LQ15477 1246 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms