RNA–Protein interactions for RNA: ENST00000429299.2

LTB-210, Transcript of lymphotoxin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTB, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTB-210ENST00000429299 FOXN1O15353 648 aa26.17■■□□□ 1.78
LTB-210ENST00000429299 FMNL2Q96PY5 1086 aa26.17■■□□□ 1.78
LTB-210ENST00000429299 CAMTA2O94983 1202 aa26.16■■□□□ 1.78
LTB-210ENST00000429299 A1BGP04217 495 aa26.16■■□□□ 1.78
LTB-210ENST00000429299 ZEB1P37275 1124 aaPredicted RBP26.15■■□□□ 1.78
LTB-210ENST00000429299 TAF1DQ9H5J8 278 aaPredicted RBP26.15■■□□□ 1.78
LTB-210ENST00000429299 SLX4Q8IY92 1834 aa26.15■■□□□ 1.78
LTB-210ENST00000429299 GAS2L2Q8NHY3 880 aa26.14■■□□□ 1.78
LTB-210ENST00000429299 C7orf43Q8WVR3 580 aa26.14■■□□□ 1.78
LTB-210ENST00000429299 COL11A2P13942 1736 aaPredicted RBP26.14■■□□□ 1.77
LTB-210ENST00000429299 TMEM88BA6NKF7 163 aa26.13■■□□□ 1.77
LTB-210ENST00000429299 CTCFP49711 727 aaPredicted RBP26.13■■□□□ 1.77
LTB-210ENST00000429299 AIDAQ96BJ3 306 aa26.13■■□□□ 1.77
LTB-210ENST00000429299 SCN7AQ01118 1682 aa26.12■■□□□ 1.77
LTB-210ENST00000429299 ITGBL1O95965 494 aaPredicted RBP26.12■■□□□ 1.77
LTB-210ENST00000429299 CLEC4GQ6UXB4 293 aa26.12■■□□□ 1.77
LTB-210ENST00000429299 DZIP3Q86Y13 1208 aaKnown RBP26.12■■□□□ 1.77
LTB-210ENST00000429299 VEGFBP49765 207 aa26.11■■□□□ 1.77
LTB-210ENST00000429299 CCDC93Q567U6 631 aa26.11■■□□□ 1.77
LTB-210ENST00000429299 SCN4AP35499 1836 aa26.1■■□□□ 1.77
LTB-210ENST00000429299 NBPF5PQ86XG9 351 aaPredicted RBP26.1■■□□□ 1.77
LTB-210ENST00000429299 PER1O15534 1290 aaPredicted RBP26.09■■□□□ 1.77
LTB-210ENST00000429299 NPR1P16066 1061 aa26.09■■□□□ 1.77
LTB-210ENST00000429299 KLRG2A4D1S0 409 aaPredicted RBP26.08■■□□□ 1.77
LTB-210ENST00000429299 FKBP4Q02790 459 aaKnown RBP eCLIP26.08■■□□□ 1.77
LTB-210ENST00000429299 WBP1LQ9NX94 342 aa26.08■■□□□ 1.77
LTB-210ENST00000429299 HACL1Q9UJ83 578 aa26.08■■□□□ 1.77
LTB-210ENST00000429299 BTBD11A6QL63 1104 aa26.07■■□□□ 1.76
LTB-210ENST00000429299 U2SURPO15042 1029 aaKnown RBP26.07■■□□□ 1.76
LTB-210ENST00000429299 EAPPQ56P03 285 aaPredicted RBP26.07■■□□□ 1.76
LTB-210ENST00000429299 RTKN2Q8IZC4 609 aa26.07■■□□□ 1.76
LTB-210ENST00000429299 ZNF652Q9Y2D9 606 aa26.07■■□□□ 1.76
LTB-210ENST00000429299 CC2D1BQ5T0F9 858 aaKnown RBP26.06■■□□□ 1.76
LTB-210ENST00000429299 TPTE2Q6XPS3 522 aa26.06■■□□□ 1.76
LTB-210ENST00000429299 PNMA8AQ86V59 439 aaPredicted RBP26.06■■□□□ 1.76
LTB-210ENST00000429299 CLEC11AQ9Y240 323 aa26.06■■□□□ 1.76
LTB-210ENST00000429299 USP16Q9Y5T5 823 aa26.06■■□□□ 1.76
LTB-210ENST00000429299 CEMIPQ8WUJ3 1361 aa26.06■■□□□ 1.76
LTB-210ENST00000429299 ZNF277Q9NRM2 450 aaPredicted RBP26.05■■□□□ 1.76
LTB-210ENST00000429299 ARFGEF2Q9Y6D5 1785 aa26.05■■□□□ 1.76
LTB-210ENST00000429299 KCNQ3O43525 872 aa26.04■■□□□ 1.76
LTB-210ENST00000429299 EPHX2P34913 555 aa26.04■■□□□ 1.76
LTB-210ENST00000429299 SIPA1L3O60292 1781 aaPredicted RBP26.03■■□□□ 1.76
LTB-210ENST00000429299 RGL2O15211 777 aa26.03■■□□□ 1.76
LTB-210ENST00000429299 DEFB115Q30KQ5 88 aa26.03■■□□□ 1.76
LTB-210ENST00000429299 KIF7Q2M1P5 1343 aa26.03■■□□□ 1.76
LTB-210ENST00000429299 ZNF541Q9H0D2 1346 aa26.03■■□□□ 1.76
LTB-210ENST00000429299 CACNA1SQ13698 1873 aa26.02■■□□□ 1.76
LTB-210ENST00000429299 RASSF10A6NK89 507 aa26.02■■□□□ 1.76
LTB-210ENST00000429299 LBX1P52954 281 aa26.02■■□□□ 1.76
LTB-210ENST00000429299 CNTROBQ8N137 903 aa26.02■■□□□ 1.76
LTB-210ENST00000429299 FZD9O00144 591 aa26.01■■□□□ 1.75
LTB-210ENST00000429299 SNRPA1P09661 255 aaKnown RBP26.01■■□□□ 1.75
LTB-210ENST00000429299 ALDH1B1P30837 517 aa26.01■■□□□ 1.75
LTB-210ENST00000429299 PIP4K2AP48426 406 aaPredicted RBP26■■□□□ 1.75
LTB-210ENST00000429299 NIP7Q9Y221 180 aaKnown RBP eCLIP26■■□□□ 1.75
LTB-210ENST00000429299 IARSP41252 1262 aaKnown RBP25.99■■□□□ 1.75
LTB-210ENST00000429299 MAP2K1Q02750 393 aaPredicted RBP25.99■■□□□ 1.75
LTB-210ENST00000429299 GPC2Q8N158 579 aa25.99■■□□□ 1.75
LTB-210ENST00000429299 SYNE4Q8N205 404 aa25.99■■□□□ 1.75
LTB-210ENST00000429299 PHACTR3Q96KR7 559 aa25.99■■□□□ 1.75
LTB-210ENST00000429299 COL3A1P02461 1466 aaPredicted RBP25.98■■□□□ 1.75
LTB-210ENST00000429299 BCORQ6W2J9 1755 aa25.98■■□□□ 1.75
LTB-210ENST00000429299 MAP1SQ66K74 1059 aaPredicted RBP25.98■■□□□ 1.75
LTB-210ENST00000429299 OLFM4Q6UX06 510 aa25.98■■□□□ 1.75
LTB-210ENST00000429299 RNF123Q5XPI4 1314 aa25.97■■□□□ 1.75
LTB-210ENST00000429299 WDR33Q9C0J8 1336 aaKnown RBP25.96■■□□□ 1.75
LTB-210ENST00000429299 PRAMEF22A3QJZ6 481 aa25.96■■□□□ 1.75
LTB-210ENST00000429299 JDP2Q8WYK2 163 aa25.96■■□□□ 1.75
LTB-210ENST00000429299 NPC1L1Q9UHC9 1359 aa25.95■■□□□ 1.75
LTB-210ENST00000429299 HSPA8P11142 646 aaKnown RBP25.95■■□□□ 1.74
LTB-210ENST00000429299 PSMD1Q99460 953 aa25.95■■□□□ 1.74
LTB-210ENST00000429299 ADAMTSL1Q8N6G6 1762 aa25.95■■□□□ 1.74
LTB-210ENST00000429299 GTF2E1P29083 439 aaPredicted RBP25.94■■□□□ 1.74
LTB-210ENST00000429299 PRKAR2BP31323 418 aa25.94■■□□□ 1.74
LTB-210ENST00000429299 ABT1Q9ULW3 272 aaKnown RBP25.94■■□□□ 1.74
LTB-210ENST00000429299 NBPF26B4DH59 902 aa25.93■■□□□ 1.74
LTB-210ENST00000429299 CC2D2BQ6DHV5 1058 aa25.93■■□□□ 1.74
LTB-210ENST00000429299 NBPF10Q6P3W6 841 aaKnown RBP25.93■■□□□ 1.74
LTB-210ENST00000429299 NBPF15Q8N660 670 aa25.93■■□□□ 1.74
LTB-210ENST00000429299 RTF1Q92541 710 aaKnown RBP25.93■■□□□ 1.74
LTB-210ENST00000429299 ABHD8Q96I13 439 aa25.93■■□□□ 1.74
LTB-210ENST00000429299 FAM177BA6PVY3 158 aa25.92■■□□□ 1.74
LTB-210ENST00000429299 RSPH6AQ9H0K4 717 aa25.92■■□□□ 1.74
LTB-210ENST00000429299 DDX21Q9NR30 783 aaKnown RBP eCLIP25.92■■□□□ 1.74
LTB-210ENST00000429299 EIF6P56537 245 aaKnown RBP25.91■■□□□ 1.74
LTB-210ENST00000429299 CRY2Q49AN0 593 aa25.9■■□□□ 1.74
LTB-210ENST00000429299 LMOD1P29536 600 aaPredicted RBP25.89■■□□□ 1.74
LTB-210ENST00000429299 HLFQ16534 295 aa25.89■■□□□ 1.74
LTB-210ENST00000429299 GRIPAP1Q4V328 841 aa25.89■■□□□ 1.74
LTB-210ENST00000429299 CFAP53Q96M91 514 aa25.89■■□□□ 1.74
LTB-210ENST00000429299 CNGB1Q14028 1251 aaPredicted RBP25.88■■□□□ 1.73
LTB-210ENST00000429299 MCM10Q7L590 875 aa25.88■■□□□ 1.73
LTB-210ENST00000429299 NYXQ9GZU5 481 aa25.88■■□□□ 1.73
LTB-210ENST00000429299 NUDCQ9Y266 331 aa25.88■■□□□ 1.73
LTB-210ENST00000429299 GJA3Q9Y6H8 435 aa25.88■■□□□ 1.73
LTB-210ENST00000429299 ECE1P42892 770 aa25.87■■□□□ 1.73
LTB-210ENST00000429299 BEGAINQ9BUH8 593 aa25.87■■□□□ 1.73
LTB-210ENST00000429299 HTATSF1O43719 755 aaKnown RBP25.86■■□□□ 1.73
LTB-210ENST00000429299 SLC34A2O95436 690 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms