RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 AIMP1Q12904 312 aaKnown RBP28.72■■■□□ 2.19
PTPN18-205ENST00000428843 KIF6Q6ZMV9 814 aa28.72■■■□□ 2.19
PTPN18-205ENST00000428843 COPS6Q7L5N1 327 aa28.72■■■□□ 2.19
PTPN18-205ENST00000428843 STK31Q9BXU1 1019 aa28.71■■■□□ 2.19
PTPN18-205ENST00000428843 MAP3K15Q6ZN16 1313 aa28.7■■■□□ 2.19
PTPN18-205ENST00000428843 CACNA1FO60840 1977 aa28.7■■■□□ 2.18
PTPN18-205ENST00000428843 MMP10P09238 476 aa28.69■■■□□ 2.18
PTPN18-205ENST00000428843 ZBTB3Q9H5J0 574 aa28.69■■■□□ 2.18
PTPN18-205ENST00000428843 PHAXQ9H814 394 aaKnown RBP28.69■■■□□ 2.18
PTPN18-205ENST00000428843 NUP98P52948 1817 aa28.69■■■□□ 2.18
PTPN18-205ENST00000428843 ERVV-1B6SEH8 477 aa28.68■■■□□ 2.18
PTPN18-205ENST00000428843 HLFQ16534 295 aa28.68■■■□□ 2.18
PTPN18-205ENST00000428843 TM4SF1P30408 202 aa28.67■■■□□ 2.18
PTPN18-205ENST00000428843 TBC1D9BQ66K14 1250 aa28.67■■■□□ 2.18
PTPN18-205ENST00000428843 CLEC4GQ6UXB4 293 aa28.67■■■□□ 2.18
PTPN18-205ENST00000428843 ZNF652Q9Y2D9 606 aa28.67■■■□□ 2.18
PTPN18-205ENST00000428843 RGL2O15211 777 aa28.66■■■□□ 2.18
PTPN18-205ENST00000428843 SLC4A2P04920 1241 aa28.66■■■□□ 2.18
PTPN18-205ENST00000428843 NFIXQ14938 502 aa28.66■■■□□ 2.18
PTPN18-205ENST00000428843 BICDL1Q6ZP65 573 aa28.65■■■□□ 2.18
PTPN18-205ENST00000428843 DDR1Q08345 913 aa28.64■■■□□ 2.18
PTPN18-205ENST00000428843 PPP1R1BQ9UD71 204 aaPredicted RBP28.64■■■□□ 2.18
PTPN18-205ENST00000428843 GIGYF2Q6Y7W6 1299 aaKnown RBP28.63■■■□□ 2.17
PTPN18-205ENST00000428843 G2E3Q7L622 706 aa28.63■■■□□ 2.17
PTPN18-205ENST00000428843 YTHDC1Q96MU7 727 aaKnown RBP28.63■■■□□ 2.17
PTPN18-205ENST00000428843 PARP3Q9Y6F1 533 aa28.63■■■□□ 2.17
PTPN18-205ENST00000428843 POLRMTO00411 1230 aaKnown RBP28.62■■■□□ 2.17
PTPN18-205ENST00000428843 CT47B1P0C2W7 299 aaPredicted RBP28.62■■■□□ 2.17
PTPN18-205ENST00000428843 PLBD2Q8NHP8 589 aa28.62■■■□□ 2.17
PTPN18-205ENST00000428843 ARFGEF2Q9Y6D5 1785 aa28.61■■■□□ 2.17
PTPN18-205ENST00000428843 ANKRD13DQ6ZTN6 518 aa28.61■■■□□ 2.17
PTPN18-205ENST00000428843 ZNF428Q96B54 188 aa28.61■■■□□ 2.17
PTPN18-205ENST00000428843 AFDNP55196 1824 aaKnown RBP28.61■■■□□ 2.17
PTPN18-205ENST00000428843 SETDB2Q96T68 719 aa28.6■■■□□ 2.17
PTPN18-205ENST00000428843 NIP7Q9Y221 180 aaKnown RBP eCLIP28.59■■■□□ 2.17
PTPN18-205ENST00000428843 ANKRD36CQ5JPF3 1778 aa28.59■■■□□ 2.17
PTPN18-205ENST00000428843 ATP10DQ9P241 1426 aa28.59■■■□□ 2.17
PTPN18-205ENST00000428843 NRXN2Q9P2S2 1712 aa28.58■■■□□ 2.17
PTPN18-205ENST00000428843 FLIIQ13045 1269 aa28.58■■■□□ 2.17
PTPN18-205ENST00000428843 CARMIL3Q8ND23 1372 aa28.58■■■□□ 2.17
PTPN18-205ENST00000428843 DDX58O95786 925 aaKnown RBP28.57■■■□□ 2.16
PTPN18-205ENST00000428843 SERPINB2P05120 415 aa28.57■■■□□ 2.16
PTPN18-205ENST00000428843 RIC3Q7Z5B4 369 aa28.57■■■□□ 2.16
PTPN18-205ENST00000428843 SSH1Q8WYL5 1049 aa28.57■■■□□ 2.16
PTPN18-205ENST00000428843 GPTP24298 496 aa28.56■■■□□ 2.16
PTPN18-205ENST00000428843 ALDH1L2Q3SY69 923 aa28.56■■■□□ 2.16
PTPN18-205ENST00000428843 MRPL50Q8N5N7 158 aaKnown RBP28.56■■■□□ 2.16
PTPN18-205ENST00000428843 ZNF34Q8IZ26 560 aa28.55■■■□□ 2.16
PTPN18-205ENST00000428843 BCL2L13Q9BXK5 485 aa28.55■■■□□ 2.16
PTPN18-205ENST00000428843 TCIRG1Q13488 830 aa28.54■■■□□ 2.16
PTPN18-205ENST00000428843 HSP90AB3PQ58FF7 597 aa28.54■■■□□ 2.16
PTPN18-205ENST00000428843 KLHL34Q8N239 644 aa28.54■■■□□ 2.16
PTPN18-205ENST00000428843 FHDC1Q9C0D6 1143 aaPredicted RBP28.54■■■□□ 2.16
PTPN18-205ENST00000428843 ADCY9O60503 1353 aa28.53■■■□□ 2.16
PTPN18-205ENST00000428843 UBN2Q6ZU65 1347 aa28.53■■■□□ 2.16
PTPN18-205ENST00000428843 PI4KAP2A4QPH2 592 aa28.53■■■□□ 2.16
PTPN18-205ENST00000428843 FKBP5Q13451 457 aaPredicted RBP28.53■■■□□ 2.16
PTPN18-205ENST00000428843 KSR2Q6VAB6 950 aa28.53■■■□□ 2.16
PTPN18-205ENST00000428843 PI4KAP1Q8N8J0 262 aa28.53■■■□□ 2.16
PTPN18-205ENST00000428843 KIF13BQ9NQT8 1826 aa28.53■■■□□ 2.16
PTPN18-205ENST00000428843 RARSP54136 660 aaKnown RBP28.52■■■□□ 2.16
PTPN18-205ENST00000428843 SMC4Q9NTJ3 1288 aa28.52■■■□□ 2.16
PTPN18-205ENST00000428843 MAP3K2Q9Y2U5 619 aa28.52■■■□□ 2.16
PTPN18-205ENST00000428843 FAM177BA6PVY3 158 aa28.51■■■□□ 2.15
PTPN18-205ENST00000428843 C10orf71Q711Q0 1435 aa28.51■■■□□ 2.15
PTPN18-205ENST00000428843 NBPF5PQ86XG9 351 aaPredicted RBP28.5■■■□□ 2.15
PTPN18-205ENST00000428843 SRCAPQ6ZRS2 3230 aa28.49■■■□□ 2.15
PTPN18-205ENST00000428843 PARP10Q53GL7 1025 aa28.49■■■□□ 2.15
PTPN18-205ENST00000428843 SUSD4Q5VX71 490 aa28.49■■■□□ 2.15
PTPN18-205ENST00000428843 PRR5LQ6MZQ0 368 aa28.49■■■□□ 2.15
PTPN18-205ENST00000428843 MYD88Q99836 296 aa28.49■■■□□ 2.15
PTPN18-205ENST00000428843 ISCA1Q9BUE6 129 aa28.49■■■□□ 2.15
PTPN18-205ENST00000428843 METTL22Q9BUU2 404 aaPredicted RBP28.49■■■□□ 2.15
PTPN18-205ENST00000428843 CD2APQ9Y5K6 639 aa28.49■■■□□ 2.15
PTPN18-205ENST00000428843 ATP5J2-PTCD1G3V325 749 aa28.48■■■□□ 2.15
PTPN18-205ENST00000428843 CNBD1Q8NA66 436 aa28.48■■■□□ 2.15
PTPN18-205ENST00000428843 NPHP1O15259 732 aa28.47■■■□□ 2.15
PTPN18-205ENST00000428843 NLRP10Q86W26 655 aa28.47■■■□□ 2.15
PTPN18-205ENST00000428843 SYT17Q9BSW7 474 aa28.47■■■□□ 2.15
PTPN18-205ENST00000428843 TPTE2Q6XPS3 522 aa28.46■■■□□ 2.15
PTPN18-205ENST00000428843 PPP1R42Q7Z4L9 355 aa28.46■■■□□ 2.15
PTPN18-205ENST00000428843 CCDC24Q8N4L8 307 aa28.46■■■□□ 2.15
PTPN18-205ENST00000428843 DNAAF4Q8WXU2 420 aa28.46■■■□□ 2.15
PTPN18-205ENST00000428843 NYXQ9GZU5 481 aa28.46■■■□□ 2.15
PTPN18-205ENST00000428843 IBTKQ9P2D0 1353 aaPredicted RBP28.46■■■□□ 2.15
PTPN18-205ENST00000428843 ANKRD31Q8N7Z5 1873 aa28.45■■■□□ 2.15
PTPN18-205ENST00000428843 F6X3S4 739 aa28.45■■■□□ 2.14
PTPN18-205ENST00000428843 BRPF1P55201 1214 aaPredicted RBP28.45■■■□□ 2.14
PTPN18-205ENST00000428843 NTSR2O95665 410 aa28.44■■■□□ 2.14
PTPN18-205ENST00000428843 ST5P78524 1137 aa28.44■■■□□ 2.14
PTPN18-205ENST00000428843 TRIM28Q13263 835 aaKnown RBP28.44■■■□□ 2.14
PTPN18-205ENST00000428843 NLGN2Q8NFZ4 835 aa28.44■■■□□ 2.14
PTPN18-205ENST00000428843 PTPRCP08575 1304 aa28.43■■■□□ 2.14
PTPN18-205ENST00000428843 KIAA1551Q9HCM1 1747 aa28.43■■■□□ 2.14
PTPN18-205ENST00000428843 NUTM1Q86Y26 1132 aa28.43■■■□□ 2.14
PTPN18-205ENST00000428843 UTP14AQ9BVJ6 771 aaKnown RBP28.43■■■□□ 2.14
PTPN18-205ENST00000428843 BCAR3O75815 825 aa28.42■■■□□ 2.14
PTPN18-205ENST00000428843 GTF2E1P29083 439 aaPredicted RBP28.42■■■□□ 2.14
PTPN18-205ENST00000428843 NEXNQ0ZGT2 675 aa28.42■■■□□ 2.14
PTPN18-205ENST00000428843 N4BP2Q86UW6 1770 aaPredicted RBP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms