RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 USP44Q9H0E7 712 aa11.36□□□□□ -0.59
NR1I3-209ENST00000428574 NUP188Q5SRE5 1749 aa11.35□□□□□ -0.59
NR1I3-209ENST00000428574 ERVV-1B6SEH8 477 aa11.35□□□□□ -0.59
NR1I3-209ENST00000428574 MYL6BP14649 208 aa11.35□□□□□ -0.59
NR1I3-209ENST00000428574 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
NR1I3-209ENST00000428574 CEP85Q6P2H3 762 aa11.35□□□□□ -0.59
NR1I3-209ENST00000428574 FAM196AQ6ZSG2 479 aa11.35□□□□□ -0.59
NR1I3-209ENST00000428574 DNAJC10Q8IXB1 793 aa11.35□□□□□ -0.59
NR1I3-209ENST00000428574 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
NR1I3-209ENST00000428574 COL5A3P25940 1745 aaPredicted RBP11.35□□□□□ -0.59
NR1I3-209ENST00000428574 CNTNAP4Q9C0A0 1308 aa11.35□□□□□ -0.59
NR1I3-209ENST00000428574 ANXA1P04083 346 aa11.34□□□□□ -0.59
NR1I3-209ENST00000428574 HSP90AB3PQ58FF7 597 aa11.34□□□□□ -0.59
NR1I3-209ENST00000428574 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
NR1I3-209ENST00000428574 SLC4A9Q96Q91 983 aa11.34□□□□□ -0.59
NR1I3-209ENST00000428574 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
NR1I3-209ENST00000428574 CCDC87Q9NVE4 849 aa11.34□□□□□ -0.59
NR1I3-209ENST00000428574 BTAF1O14981 1849 aa11.33□□□□□ -0.6
NR1I3-209ENST00000428574 NEURL1BA8MQ27 555 aa11.33□□□□□ -0.6
NR1I3-209ENST00000428574 GRM8O00222 908 aa11.33□□□□□ -0.6
NR1I3-209ENST00000428574 A1BGP04217 495 aa11.33□□□□□ -0.6
NR1I3-209ENST00000428574 KIF6Q6ZMV9 814 aa11.33□□□□□ -0.6
NR1I3-209ENST00000428574 KRT27Q7Z3Y8 459 aa11.33□□□□□ -0.6
NR1I3-209ENST00000428574 CCDC191Q8NCU4 936 aa11.33□□□□□ -0.6
NR1I3-209ENST00000428574 ACSBG1Q96GR2 724 aa11.33□□□□□ -0.6
NR1I3-209ENST00000428574 DCTPP1Q9H773 170 aa11.33□□□□□ -0.6
NR1I3-209ENST00000428574 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
NR1I3-209ENST00000428574 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
NR1I3-209ENST00000428574 LY75O60449 1722 aa11.32□□□□□ -0.6
NR1I3-209ENST00000428574 A0A087WZG4 1122 aa11.32□□□□□ -0.6
NR1I3-209ENST00000428574 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
NR1I3-209ENST00000428574 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
NR1I3-209ENST00000428574 ATP8B2P98198 1209 aa11.32□□□□□ -0.6
NR1I3-209ENST00000428574 NUCB1Q02818 461 aa11.32□□□□□ -0.6
NR1I3-209ENST00000428574 AIMP1Q12904 312 aaKnown RBP11.32□□□□□ -0.6
NR1I3-209ENST00000428574 GCKRQ14397 625 aa11.32□□□□□ -0.6
NR1I3-209ENST00000428574 GIGYF2Q6Y7W6 1299 aaKnown RBP11.32□□□□□ -0.6
NR1I3-209ENST00000428574 NPM2Q86SE8 214 aaKnown RBP11.32□□□□□ -0.6
NR1I3-209ENST00000428574 SIRT2Q8IXJ6 389 aa11.32□□□□□ -0.6
NR1I3-209ENST00000428574 SSH3Q8TE77 659 aa11.32□□□□□ -0.6
NR1I3-209ENST00000428574 C9orf78Q9NZ63 289 aaPredicted RBP11.32□□□□□ -0.6
NR1I3-209ENST00000428574 KCNQ2O43526 872 aa11.31□□□□□ -0.6
NR1I3-209ENST00000428574 CRKLP46109 303 aaKnown RBP11.31□□□□□ -0.6
NR1I3-209ENST00000428574 EIF5P55010 431 aaKnown RBP11.31□□□□□ -0.6
NR1I3-209ENST00000428574 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
NR1I3-209ENST00000428574 SLC27A3Q5K4L6 730 aa11.31□□□□□ -0.6
NR1I3-209ENST00000428574 TCIRG1Q13488 830 aa11.3□□□□□ -0.6
NR1I3-209ENST00000428574 POLA2Q14181 598 aa11.3□□□□□ -0.6
NR1I3-209ENST00000428574 INTS5Q6P9B9 1019 aaKnown RBP11.3□□□□□ -0.6
NR1I3-209ENST00000428574 ISCA1Q9BUE6 129 aa11.3□□□□□ -0.6
NR1I3-209ENST00000428574 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
NR1I3-209ENST00000428574 RGPD3A6NKT7 1758 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-209ENST00000428574 RGPD4Q7Z3J3 1758 aa11.29□□□□□ -0.6
NR1I3-209ENST00000428574 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
NR1I3-209ENST00000428574 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
NR1I3-209ENST00000428574 RXRBP28702 533 aa11.29□□□□□ -0.6
NR1I3-209ENST00000428574 CLEC4GQ6UXB4 293 aa11.29□□□□□ -0.6
NR1I3-209ENST00000428574 CHD1LQ86WJ1 897 aa11.29□□□□□ -0.6
NR1I3-209ENST00000428574 MYD88Q99836 296 aa11.29□□□□□ -0.6
NR1I3-209ENST00000428574 C1orf115Q9H7X2 142 aa11.29□□□□□ -0.6
NR1I3-209ENST00000428574 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
NR1I3-209ENST00000428574 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
NR1I3-209ENST00000428574 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
NR1I3-209ENST00000428574 H7C1W4 665 aa11.28□□□□□ -0.6
NR1I3-209ENST00000428574 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
NR1I3-209ENST00000428574 ITPK1Q13572 414 aa11.28□□□□□ -0.6
NR1I3-209ENST00000428574 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
NR1I3-209ENST00000428574 RABL6Q3YEC7 729 aaPredicted RBP11.28□□□□□ -0.6
NR1I3-209ENST00000428574 TTLL7Q6ZT98 887 aa11.28□□□□□ -0.6
NR1I3-209ENST00000428574 DZIP3Q86Y13 1208 aaKnown RBP11.28□□□□□ -0.6
NR1I3-209ENST00000428574 AK7Q96M32 723 aa11.28□□□□□ -0.6
NR1I3-209ENST00000428574 ZNF652Q9Y2D9 606 aa11.28□□□□□ -0.6
NR1I3-209ENST00000428574 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
NR1I3-209ENST00000428574 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
NR1I3-209ENST00000428574 ANKRD36CQ5JPF3 1778 aa11.28□□□□□ -0.6
NR1I3-209ENST00000428574 BCORQ6W2J9 1755 aa11.27□□□□□ -0.61
NR1I3-209ENST00000428574 PCCAP05165 728 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-209ENST00000428574 CASP7P55210 303 aa11.27□□□□□ -0.61
NR1I3-209ENST00000428574 PARP10Q53GL7 1025 aa11.27□□□□□ -0.61
NR1I3-209ENST00000428574 PLA2G12BQ9BX93 195 aa11.27□□□□□ -0.61
NR1I3-209ENST00000428574 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
NR1I3-209ENST00000428574 BRWD3Q6RI45 1802 aa11.27□□□□□ -0.61
NR1I3-209ENST00000428574 SCN7AQ01118 1682 aa11.27□□□□□ -0.61
NR1I3-209ENST00000428574 PLSCR1O15162 318 aa11.26□□□□□ -0.61
NR1I3-209ENST00000428574 RPS6KA4O75676 772 aa11.26□□□□□ -0.61
NR1I3-209ENST00000428574 PIP4K2AP48426 406 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-209ENST00000428574 ERC1Q8IUD2 1116 aa11.26□□□□□ -0.61
NR1I3-209ENST00000428574 ZBTB3Q9H5J0 574 aa11.26□□□□□ -0.61
NR1I3-209ENST00000428574 CCNL1Q9UK58 526 aaPredicted RBP11.26□□□□□ -0.61
NR1I3-209ENST00000428574 AFDNP55196 1824 aaKnown RBP11.25□□□□□ -0.61
NR1I3-209ENST00000428574 PNMA6EA0A0J9YXQ4 647 aa11.25□□□□□ -0.61
NR1I3-209ENST00000428574 SRGAP3O43295 1099 aa11.25□□□□□ -0.61
NR1I3-209ENST00000428574 EIF5BO60841 1220 aaKnown RBP11.25□□□□□ -0.61
NR1I3-209ENST00000428574 CAMTA2O94983 1202 aa11.25□□□□□ -0.61
NR1I3-209ENST00000428574 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
NR1I3-209ENST00000428574 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-209ENST00000428574 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
NR1I3-209ENST00000428574 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
NR1I3-209ENST00000428574 TAF1LQ8IZX4 1826 aa11.24□□□□□ -0.61
NR1I3-209ENST00000428574 ANKRD45Q5TZF3 282 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms