RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 FOSBP53539 338 aa16.11■□□□□ 0.17
LRCH3-203ENST00000425562 UVSSAQ2YD98 709 aa16.11■□□□□ 0.17
LRCH3-203ENST00000425562 ABTB2Q8N961 1025 aa16.11■□□□□ 0.17
LRCH3-203ENST00000425562 IL17REQ8NFR9 667 aa16.11■□□□□ 0.17
LRCH3-203ENST00000425562 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
LRCH3-203ENST00000425562 SPTLC3Q9NUV7 552 aa16.11■□□□□ 0.17
LRCH3-203ENST00000425562 TECPR2O15040 1411 aa16.11■□□□□ 0.17
LRCH3-203ENST00000425562 SYTL4Q96C24 671 aaPredicted RBP16.1■□□□□ 0.17
LRCH3-203ENST00000425562 TRIM5Q9C035 493 aa16.1■□□□□ 0.17
LRCH3-203ENST00000425562 EID1Q9Y6B2 187 aa16.1■□□□□ 0.17
LRCH3-203ENST00000425562 STK3Q13188 491 aa16.1■□□□□ 0.17
LRCH3-203ENST00000425562 PRPF40BQ6NWY9 871 aaKnown RBP16.1■□□□□ 0.17
LRCH3-203ENST00000425562 JAKMIP1Q96N16 626 aaKnown RBP16.1■□□□□ 0.17
LRCH3-203ENST00000425562 DIAPH3Q9NSV4 1193 aa16.1■□□□□ 0.17
LRCH3-203ENST00000425562 SIRT1Q96EB6 747 aa16.09■□□□□ 0.17
LRCH3-203ENST00000425562 RGPD8O14715 1765 aaPredicted RBP16.09■□□□□ 0.17
LRCH3-203ENST00000425562 GNAT3A8MTJ3 354 aa16.09■□□□□ 0.17
LRCH3-203ENST00000425562 VGLL3A8MV65 326 aa16.09■□□□□ 0.17
LRCH3-203ENST00000425562 HSPA4P34932 840 aa16.09■□□□□ 0.17
LRCH3-203ENST00000425562 GTF2F1P35269 517 aaKnown RBP eCLIP16.09■□□□□ 0.17
LRCH3-203ENST00000425562 CEBPZQ03701 1054 aaKnown RBP16.09■□□□□ 0.17
LRCH3-203ENST00000425562 ARID5BQ14865 1188 aa16.09■□□□□ 0.17
LRCH3-203ENST00000425562 UTP14CQ5TAP6 766 aaKnown RBP16.09■□□□□ 0.17
LRCH3-203ENST00000425562 FLT4P35916 1363 aa16.09■□□□□ 0.17
LRCH3-203ENST00000425562 NCBP1Q09161 790 aaKnown RBP16.08■□□□□ 0.17
LRCH3-203ENST00000425562 LIMCH1Q9UPQ0 1083 aa16.08■□□□□ 0.16
LRCH3-203ENST00000425562 NRKQ7Z2Y5 1582 aa16.08■□□□□ 0.16
LRCH3-203ENST00000425562 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.16
LRCH3-203ENST00000425562 CCDC30Q5VVM6 783 aa16.08■□□□□ 0.16
LRCH3-203ENST00000425562 BBXQ8WY36 941 aaPredicted RBP16.08■□□□□ 0.16
LRCH3-203ENST00000425562 ERICH4A6NGS2 130 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 TNNT1P13805 278 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 HOXC9P31274 260 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 KCNJ4P48050 445 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 PTH1RQ03431 593 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 ANO6Q4KMQ2 910 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 HDGFL1Q5TGJ6 251 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 TRERF1Q96PN7 1200 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 KCNQ3O43525 872 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 CCDC192P0DO97 292 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 TRHP20396 242 aaPredicted RBP16.07■□□□□ 0.16
LRCH3-203ENST00000425562 ANAPC15P60006 121 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
LRCH3-203ENST00000425562 SBNO1A3KN83 1393 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 ARHGEF10O15013 1369 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 SALL3Q9BXA9 1300 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 FUCA2Q9BTY2 467 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 TRMT1Q9NXH9 659 aaKnown RBP16.06■□□□□ 0.16
LRCH3-203ENST00000425562 DACT1Q9NYF0 836 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 MTMR6Q9Y217 621 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 USP31Q70CQ4 1352 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 IGSF1Q8N6C5 1336 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 GOLGA6L4A6NEF3 574 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 UBTFL1P0CB47 393 aaPredicted RBP16.06■□□□□ 0.16
LRCH3-203ENST00000425562 TPD52L1Q16890 204 aaPredicted RBP16.06■□□□□ 0.16
LRCH3-203ENST00000425562 CDC37L1Q7L3B6 337 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 PPP1R42Q7Z4L9 355 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 USP44Q9H0E7 712 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 LGR6Q9HBX8 967 aa16.06■□□□□ 0.16
LRCH3-203ENST00000425562 SRGAP3O43295 1099 aa16.05■□□□□ 0.16
LRCH3-203ENST00000425562 KCNA6P17658 529 aa16.05■□□□□ 0.16
LRCH3-203ENST00000425562 ATP8B2P98198 1209 aa16.05■□□□□ 0.16
LRCH3-203ENST00000425562 TYRO3Q06418 890 aa16.05■□□□□ 0.16
LRCH3-203ENST00000425562 ERCC4Q92889 916 aaPredicted RBP16.05■□□□□ 0.16
LRCH3-203ENST00000425562 DDX11Q96FC9 970 aa16.05■□□□□ 0.16
LRCH3-203ENST00000425562 GTPBP4Q9BZE4 634 aaKnown RBP16.05■□□□□ 0.16
LRCH3-203ENST00000425562 ST7Q9NRC1 585 aa16.05■□□□□ 0.16
LRCH3-203ENST00000425562 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.05■□□□□ 0.16
LRCH3-203ENST00000425562 UBR1Q8IWV7 1749 aa16.05■□□□□ 0.16
LRCH3-203ENST00000425562 LARP1BQ659C4 914 aaKnown RBP16.05■□□□□ 0.16
LRCH3-203ENST00000425562 ZBTB9Q96C00 473 aa16.05■□□□□ 0.16
LRCH3-203ENST00000425562 DNAJC25Q9H1X3 360 aa16.05■□□□□ 0.16
LRCH3-203ENST00000425562 PDRG1Q9NUG6 133 aa16.05■□□□□ 0.16
LRCH3-203ENST00000425562 GOLGA6L6A8MZA4 724 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 NUP62CLQ9H1M0 184 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 TAOK2Q9UL54 1235 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 USP27XA6NNY8 438 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 SGSM2O43147 1006 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 GNAI3P08754 354 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 NBPF7P0C2Y1 421 aaPredicted RBP16.04■□□□□ 0.16
LRCH3-203ENST00000425562 ME3Q16798 604 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 TTC14Q96N46 770 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 TNMDQ9H2S6 317 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 CBX8Q9HC52 389 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 MRVI1Q9Y6F6 885 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 REREQ9P2R6 1566 aa16.04■□□□□ 0.16
LRCH3-203ENST00000425562 MAP3K11Q16584 847 aa16.03■□□□□ 0.16
LRCH3-203ENST00000425562 ANKRD7Q92527 254 aa16.03■□□□□ 0.16
LRCH3-203ENST00000425562 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
LRCH3-203ENST00000425562 LSG1Q9H089 658 aaKnown RBP16.03■□□□□ 0.16
LRCH3-203ENST00000425562 SOS1Q07889 1333 aaPredicted RBP16.03■□□□□ 0.16
LRCH3-203ENST00000425562 RAD50Q92878 1312 aa16.03■□□□□ 0.16
LRCH3-203ENST00000425562 LETM1O95202 739 aaPredicted RBP16.02■□□□□ 0.16
LRCH3-203ENST00000425562 TAF7Q15545 349 aaPredicted RBP16.02■□□□□ 0.16
LRCH3-203ENST00000425562 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
LRCH3-203ENST00000425562 LMOD2Q6P5Q4 547 aa16.02■□□□□ 0.16
LRCH3-203ENST00000425562 FILIP1Q7Z7B0 1213 aa16.02■□□□□ 0.16
LRCH3-203ENST00000425562 CCDC144CPQ8IYA2 1237 aa16.02■□□□□ 0.16
LRCH3-203ENST00000425562 PLEKHG1Q9ULL1 1385 aa16.02■□□□□ 0.16
LRCH3-203ENST00000425562 RHPN1Q8TCX5 695 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms