RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 SERTM1A2A2V5 107 aa10.37□□□□□ -0.75
RAB3GAP1-202ENST00000425393 ZNF468Q5VIY5 522 aaPredicted RBP10.37□□□□□ -0.75
RAB3GAP1-202ENST00000425393 PROSER2Q86WR7 435 aaPredicted RBP10.37□□□□□ -0.75
RAB3GAP1-202ENST00000425393 SIX5Q8N196 739 aa10.37□□□□□ -0.75
RAB3GAP1-202ENST00000425393 LARGE2Q8N3Y3 721 aa10.37□□□□□ -0.75
RAB3GAP1-202ENST00000425393 C7orf43Q8WVR3 580 aa10.37□□□□□ -0.75
RAB3GAP1-202ENST00000425393 TSPAN10Q9H1Z9 355 aaPredicted RBP10.37□□□□□ -0.75
RAB3GAP1-202ENST00000425393 MARK1Q9P0L2 795 aa10.37□□□□□ -0.75
RAB3GAP1-202ENST00000425393 GPC6Q9Y625 555 aaPredicted RBP10.37□□□□□ -0.75
RAB3GAP1-202ENST00000425393 KRBA1A5PL33 1030 aa10.36□□□□□ -0.75
RAB3GAP1-202ENST00000425393 M0R2N6 131 aa10.36□□□□□ -0.75
RAB3GAP1-202ENST00000425393 PSMA6P60900 246 aaKnown RBP10.36□□□□□ -0.75
RAB3GAP1-202ENST00000425393 LAMC2Q13753 1193 aa10.36□□□□□ -0.75
RAB3GAP1-202ENST00000425393 LRRC69Q6ZNQ3 347 aa10.36□□□□□ -0.75
RAB3GAP1-202ENST00000425393 CHSY3Q70JA7 882 aa10.36□□□□□ -0.75
RAB3GAP1-202ENST00000425393 GLMNQ92990 594 aa10.36□□□□□ -0.75
RAB3GAP1-202ENST00000425393 SUV39H2Q9H5I1 410 aa10.36□□□□□ -0.75
RAB3GAP1-202ENST00000425393 PALM3A6NDB9 673 aaPredicted RBP10.35□□□□□ -0.75
RAB3GAP1-202ENST00000425393 GNB5O14775 395 aa10.35□□□□□ -0.75
RAB3GAP1-202ENST00000425393 PCBP4P57723 403 aaKnown RBP10.35□□□□□ -0.75
RAB3GAP1-202ENST00000425393 ZNF594Q96JF6 807 aaPredicted RBP10.35□□□□□ -0.75
RAB3GAP1-202ENST00000425393 K7ELQ4 463 aaPredicted RBP10.34□□□□□ -0.75
RAB3GAP1-202ENST00000425393 DKK1O94907 266 aa10.34□□□□□ -0.75
RAB3GAP1-202ENST00000425393 HIRAP54198 1017 aaPredicted RBP10.34□□□□□ -0.75
RAB3GAP1-202ENST00000425393 GRIN2CQ14957 1233 aa10.34□□□□□ -0.75
RAB3GAP1-202ENST00000425393 POTEAQ6S8J7 498 aa10.34□□□□□ -0.75
RAB3GAP1-202ENST00000425393 PRR12Q9ULL5 1215 aa10.34□□□□□ -0.75
RAB3GAP1-202ENST00000425393 TSEN2Q8NCE0 465 aaKnown RBP10.33□□□□□ -0.76
RAB3GAP1-202ENST00000425393 RHPN1Q8TCX5 695 aa10.33□□□□□ -0.76
RAB3GAP1-202ENST00000425393 SFI1A8K8P3 1242 aa10.32□□□□□ -0.76
RAB3GAP1-202ENST00000425393 MAFBQ9Y5Q3 323 aaPredicted RBP10.32□□□□□ -0.76
RAB3GAP1-202ENST00000425393 C1orf53Q5VUE5 145 aa10.31□□□□□ -0.76
RAB3GAP1-202ENST00000425393 TFIP11Q9UBB9 837 aaKnown RBP10.31□□□□□ -0.76
RAB3GAP1-202ENST00000425393 C21orf2O43822 256 aa10.3□□□□□ -0.76
RAB3GAP1-202ENST00000425393 BAG6P46379 1132 aa10.3□□□□□ -0.76
RAB3GAP1-202ENST00000425393 SYT9Q86SS6 491 aa10.3□□□□□ -0.76
RAB3GAP1-202ENST00000425393 HSH2DQ96JZ2 352 aa10.3□□□□□ -0.76
RAB3GAP1-202ENST00000425393 PHACTR1Q9C0D0 580 aa10.3□□□□□ -0.76
RAB3GAP1-202ENST00000425393 NEUROD4Q9HD90 331 aa10.3□□□□□ -0.76
RAB3GAP1-202ENST00000425393 CHMP3Q9Y3E7 222 aa10.3□□□□□ -0.76
RAB3GAP1-202ENST00000425393 RASA1P20936 1047 aa10.29□□□□□ -0.76
RAB3GAP1-202ENST00000425393 SFSWAPQ12872 951 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-202ENST00000425393 XP32Q5T750 250 aa10.29□□□□□ -0.76
RAB3GAP1-202ENST00000425393 MDFIQ99750 246 aa10.29□□□□□ -0.76
RAB3GAP1-202ENST00000425393 NOP53Q9NZM5 478 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-202ENST00000425393 HCN4Q9Y3Q4 1203 aa10.29□□□□□ -0.76
RAB3GAP1-202ENST00000425393 RBM19Q9Y4C8 960 aaKnown RBP10.29□□□□□ -0.76
RAB3GAP1-202ENST00000425393 SLC30A3Q99726 388 aa10.28□□□□□ -0.76
RAB3GAP1-202ENST00000425393 ELOA3CA0A087WX78 387 aaPredicted RBP10.27□□□□□ -0.77
RAB3GAP1-202ENST00000425393 ELOA3DA6NLF2 546 aaPredicted RBP10.27□□□□□ -0.77
RAB3GAP1-202ENST00000425393 PPP1R12BO60237 982 aaPredicted RBP10.27□□□□□ -0.77
RAB3GAP1-202ENST00000425393 ELOA3BQ3SY89 546 aa10.27□□□□□ -0.77
RAB3GAP1-202ENST00000425393 ELOA3Q8NG57 546 aa10.27□□□□□ -0.77
RAB3GAP1-202ENST00000425393 SIN3BO75182 1162 aa10.26□□□□□ -0.77
RAB3GAP1-202ENST00000425393 TRIM11Q96F44 468 aa10.26□□□□□ -0.77
RAB3GAP1-202ENST00000425393 BRD7Q9NPI1 651 aa10.26□□□□□ -0.77
RAB3GAP1-202ENST00000425393 A6NJR5 290 aa10.25□□□□□ -0.77
RAB3GAP1-202ENST00000425393 SEC13P55735 322 aa10.25□□□□□ -0.77
RAB3GAP1-202ENST00000425393 TYRO3Q06418 890 aa10.25□□□□□ -0.77
RAB3GAP1-202ENST00000425393 STAG2Q8N3U4 1231 aa10.25□□□□□ -0.77
RAB3GAP1-202ENST00000425393 ZNF280CQ8ND82 737 aa10.25□□□□□ -0.77
RAB3GAP1-202ENST00000425393 SUSD3Q96L08 255 aa10.25□□□□□ -0.77
RAB3GAP1-202ENST00000425393 CALR3Q96L12 384 aaKnown RBP10.25□□□□□ -0.77
RAB3GAP1-202ENST00000425393 PPP1R12CQ9BZL4 782 aa10.25□□□□□ -0.77
RAB3GAP1-202ENST00000425393 SPEM2Q0P670 501 aa10.24□□□□□ -0.77
RAB3GAP1-202ENST00000425393 CRTC2Q53ET0 693 aaPredicted RBP10.24□□□□□ -0.77
RAB3GAP1-202ENST00000425393 SCG3Q8WXD2 468 aaKnown RBP10.24□□□□□ -0.77
RAB3GAP1-202ENST00000425393 CEP63Q96MT8 703 aa10.24□□□□□ -0.77
RAB3GAP1-202ENST00000425393 C2orf49Q9BVC5 232 aaPredicted RBP10.24□□□□□ -0.77
RAB3GAP1-202ENST00000425393 ANKIB1Q9P2G1 1089 aa10.24□□□□□ -0.77
RAB3GAP1-202ENST00000425393 ATAD2Q6PL18 1390 aa10.24□□□□□ -0.77
RAB3GAP1-202ENST00000425393 ADARB2-AS1A8MUL3 147 aa10.23□□□□□ -0.77
RAB3GAP1-202ENST00000425393 KCNQ4P56696 695 aa10.23□□□□□ -0.77
RAB3GAP1-202ENST00000425393 PTK7Q13308 1070 aa10.23□□□□□ -0.77
RAB3GAP1-202ENST00000425393 RAB44Q7Z6P3 723 aaPredicted RBP10.23□□□□□ -0.77
RAB3GAP1-202ENST00000425393 ALDH16A1Q8IZ83 802 aa10.23□□□□□ -0.77
RAB3GAP1-202ENST00000425393 TNFRSF25Q93038 417 aa10.23□□□□□ -0.77
RAB3GAP1-202ENST00000425393 ALAS2P22557 587 aa10.22□□□□□ -0.77
RAB3GAP1-202ENST00000425393 CHRNA4P43681 627 aa10.22□□□□□ -0.77
RAB3GAP1-202ENST00000425393 KANK4Q5T7N3 995 aaPredicted RBP10.22□□□□□ -0.77
RAB3GAP1-202ENST00000425393 LARP1Q6PKG0 1096 aaKnown RBP10.22□□□□□ -0.77
RAB3GAP1-202ENST00000425393 C1QTNF9BB2RNN3 333 aa10.21□□□□□ -0.77
RAB3GAP1-202ENST00000425393 FURINP09958 794 aa10.21□□□□□ -0.77
RAB3GAP1-202ENST00000425393 DPYDQ12882 1025 aa10.21□□□□□ -0.77
RAB3GAP1-202ENST00000425393 CD163Q86VB7 1156 aa10.21□□□□□ -0.77
RAB3GAP1-202ENST00000425393 GAS2L2Q8NHY3 880 aa10.21□□□□□ -0.77
RAB3GAP1-202ENST00000425393 PLVAPQ9BX97 442 aa10.21□□□□□ -0.77
RAB3GAP1-202ENST00000425393 USP17L15C9J2P7 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L10C9JJH3 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L13C9JLJ4 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L12C9JPN9 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L11C9JVI0 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L21D6R901 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L18D6R9N7 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L22D6RA61 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L17D6RBQ6 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L19D6RCP7 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L20D6RJB6 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 USP17L24Q0WX57 530 aa10.2□□□□□ -0.78
RAB3GAP1-202ENST00000425393 CHMP7Q8WUX9 453 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms