RNA–Protein interactions for RNA: ENST00000423536.5

SNHG17-204, Transcript of small nucleolar RNA host gene 17, human

TSL 2 BASIC

Gene SNHG17, Length 517 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-204	ENST00000423536	PRR5L	Q6MZQ0	368 aa		11.23	□□□□□ -0.61
SNHG17-204	ENST00000423536	RTKN2	Q8IZC4	609 aa		11.23	□□□□□ -0.61
SNHG17-204	ENST00000423536	VSIG10	Q8N0Z9	540 aa		11.23	□□□□□ -0.61
SNHG17-204	ENST00000423536	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.23	□□□□□ -0.61
SNHG17-204	ENST00000423536	MCOLN1	Q9GZU1	580 aa		11.23	□□□□□ -0.61
SNHG17-204	ENST00000423536	LGR6	Q9HBX8	967 aa		11.23	□□□□□ -0.61
SNHG17-204	ENST00000423536	GJA3	Q9Y6H8	435 aa		11.23	□□□□□ -0.61
SNHG17-204	ENST00000423536	COL5A3	P25940	1745 aa	Predicted RBP	11.23	□□□□□ -0.61
SNHG17-204	ENST00000423536	TIAM2	Q8IVF5	1701 aa		11.23	□□□□□ -0.61
SNHG17-204	ENST00000423536	CA12	O43570	354 aa		11.22	□□□□□ -0.61
SNHG17-204	ENST00000423536	SRGN	P10124	158 aa		11.22	□□□□□ -0.61
SNHG17-204	ENST00000423536	EIF6	P56537	245 aa	Known RBP	11.22	□□□□□ -0.61
SNHG17-204	ENST00000423536	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
SNHG17-204	ENST00000423536	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.22	□□□□□ -0.61
SNHG17-204	ENST00000423536	KIF20B	Q96Q89	1820 aa		11.21	□□□□□ -0.61
SNHG17-204	ENST00000423536	RNF123	Q5XPI4	1314 aa		11.21	□□□□□ -0.61
SNHG17-204	ENST00000423536	RNMT	O43148	476 aa	Known RBP	11.21	□□□□□ -0.61
SNHG17-204	ENST00000423536	GTF2E1	P29083	439 aa	Predicted RBP	11.21	□□□□□ -0.61
SNHG17-204	ENST00000423536	GPC2	Q8N158	579 aa		11.21	□□□□□ -0.61
SNHG17-204	ENST00000423536	SYNE4	Q8N205	404 aa		11.21	□□□□□ -0.61
SNHG17-204	ENST00000423536	NPR1	P16066	1061 aa		11.2	□□□□□ -0.62
SNHG17-204	ENST00000423536	ALDH1B1	P30837	517 aa		11.2	□□□□□ -0.62
SNHG17-204	ENST00000423536	EIF5	P55010	431 aa	Known RBP	11.2	□□□□□ -0.62
SNHG17-204	ENST00000423536	MORC1	Q86VD1	984 aa		11.2	□□□□□ -0.62
SNHG17-204	ENST00000423536	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.2	□□□□□ -0.62
SNHG17-204	ENST00000423536	AEBP1	Q8IUX7	1158 aa		11.2	□□□□□ -0.62
SNHG17-204	ENST00000423536	CARMIL3	Q8ND23	1372 aa		11.19	□□□□□ -0.62
SNHG17-204	ENST00000423536	AFDN	P55196	1824 aa	Known RBP	11.19	□□□□□ -0.62
SNHG17-204	ENST00000423536	ZNF541	Q9H0D2	1346 aa		11.19	□□□□□ -0.62
SNHG17-204	ENST00000423536	AOC2	O75106	756 aa		11.19	□□□□□ -0.62
SNHG17-204	ENST00000423536	IARS	P41252	1262 aa	Known RBP	11.19	□□□□□ -0.62
SNHG17-204	ENST00000423536	TPTE2	Q6XPS3	522 aa		11.19	□□□□□ -0.62
SNHG17-204	ENST00000423536	TMX4	Q9H1E5	349 aa	Predicted RBP	11.18	□□□□□ -0.62
SNHG17-204	ENST00000423536	SCN4A	P35499	1836 aa		11.18	□□□□□ -0.62
SNHG17-204	ENST00000423536	DICER1	Q9UPY3	1922 aa	Known RBP	11.17	□□□□□ -0.62
SNHG17-204	ENST00000423536	VIRMA	Q69YN4	1812 aa	Known RBP	11.17	□□□□□ -0.62
SNHG17-204	ENST00000423536	FZD9	O00144	591 aa		11.17	□□□□□ -0.62
SNHG17-204	ENST00000423536	IL6ST	P40189	918 aa	Predicted RBP	11.17	□□□□□ -0.62
SNHG17-204	ENST00000423536	TEF	Q10587	303 aa		11.17	□□□□□ -0.62
SNHG17-204	ENST00000423536	USP50	Q70EL3	339 aa	Predicted RBP	11.17	□□□□□ -0.62
SNHG17-204	ENST00000423536	TLL2	Q9Y6L7	1015 aa		11.17	□□□□□ -0.62
SNHG17-204	ENST00000423536	FAM177B	A6PVY3	158 aa		11.16	□□□□□ -0.62
SNHG17-204	ENST00000423536	FMR1	Q06787	632 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
SNHG17-204	ENST00000423536	CST9	Q5W186	159 aa		11.16	□□□□□ -0.62
SNHG17-204	ENST00000423536	DZIP3	Q86Y13	1208 aa	Known RBP	11.16	□□□□□ -0.62
SNHG17-204	ENST00000423536	C7orf43	Q8WVR3	580 aa		11.16	□□□□□ -0.62
SNHG17-204	ENST00000423536	ZNF408	Q9H9D4	720 aa		11.16	□□□□□ -0.62
SNHG17-204	ENST00000423536	ZNF652	Q9Y2D9	606 aa		11.16	□□□□□ -0.62
SNHG17-204	ENST00000423536	TRAF5	O00463	557 aa		11.15	□□□□□ -0.62
SNHG17-204	ENST00000423536	CELF2	O95319	508 aa	Known RBP	11.15	□□□□□ -0.62
SNHG17-204	ENST00000423536	A1BG	P04217	495 aa		11.15	□□□□□ -0.62
SNHG17-204	ENST00000423536	EPS15	P42566	896 aa		11.15	□□□□□ -0.62
SNHG17-204	ENST00000423536	LARGE2	Q8N3Y3	721 aa		11.15	□□□□□ -0.62
SNHG17-204	ENST00000423536	FER1L6	Q2WGJ9	1857 aa		11.15	□□□□□ -0.63
SNHG17-204	ENST00000423536	DLEC1	Q9Y238	1755 aa		11.14	□□□□□ -0.63
SNHG17-204	ENST00000423536	HMOX1	P09601	288 aa		11.14	□□□□□ -0.63
SNHG17-204	ENST00000423536	BRPF1	P55201	1214 aa	Predicted RBP	11.14	□□□□□ -0.63
SNHG17-204	ENST00000423536	SOX10	P56693	466 aa		11.14	□□□□□ -0.63
SNHG17-204	ENST00000423536	CIAPIN1	Q6FI81	312 aa		11.14	□□□□□ -0.63
SNHG17-204	ENST00000423536	NRXN2	Q9P2S2	1712 aa		11.14	□□□□□ -0.63
SNHG17-204	ENST00000423536	TJP1	Q07157	1748 aa		11.13	□□□□□ -0.63
SNHG17-204	ENST00000423536	CC2D2B	Q6DHV5	1058 aa		11.13	□□□□□ -0.63
SNHG17-204	ENST00000423536	OLFM4	Q6UX06	510 aa		11.13	□□□□□ -0.63
SNHG17-204	ENST00000423536	CLEC4G	Q6UXB4	293 aa		11.13	□□□□□ -0.63
SNHG17-204	ENST00000423536	FMNL2	Q96PY5	1086 aa		11.13	□□□□□ -0.63
SNHG17-204	ENST00000423536	PANK3	Q9H999	370 aa		11.13	□□□□□ -0.63
SNHG17-204	ENST00000423536	SLX4	Q8IY92	1834 aa		11.13	□□□□□ -0.63
SNHG17-204	ENST00000423536	TCERG1	O14776	1098 aa	Known RBP	11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	CAMTA2	O94983	1202 aa		11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	IL13	P35225	146 aa		11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	MTHFSD	Q2M296	383 aa	Known RBP	11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	GRIPAP1	Q4V328	841 aa		11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	PRPF38B	Q5VTL8	546 aa	Known RBP	11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	ZNF790	Q6PG37	636 aa		11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	SAPCD2	Q86UD0	394 aa		11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	NIM1K	Q8IY84	436 aa		11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	ZNF496	Q96IT1	587 aa	Predicted RBP	11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	PSMD1	Q99460	953 aa		11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	ADARB2	Q9NS39	739 aa	Known RBP	11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
SNHG17-204	ENST00000423536	NOG	Q13253	232 aa		11.11	□□□□□ -0.63
SNHG17-204	ENST00000423536	NBPF15	Q8N660	670 aa		11.11	□□□□□ -0.63
SNHG17-204	ENST00000423536	RPGR	Q92834	1020 aa	Known RBP	11.11	□□□□□ -0.63
SNHG17-204	ENST00000423536	HHIPL1	Q96JK4	782 aa		11.11	□□□□□ -0.63
SNHG17-204	ENST00000423536	ANKRD26	Q9UPS8	1709 aa		11.11	□□□□□ -0.63
SNHG17-204	ENST00000423536	CDC37L1	Q7L3B6	337 aa		11.1	□□□□□ -0.63
SNHG17-204	ENST00000423536	GCC1	Q96CN9	775 aa		11.1	□□□□□ -0.63
SNHG17-204	ENST00000423536	BCL2L13	Q9BXK5	485 aa		11.1	□□□□□ -0.63
SNHG17-204	ENST00000423536	KNSTRN	Q9Y448	316 aa		11.1	□□□□□ -0.63
SNHG17-204	ENST00000423536	ADAMTS7	Q9UKP4	1686 aa		11.1	□□□□□ -0.63
SNHG17-204	ENST00000423536	HEG1	Q9ULI3	1381 aa		11.09	□□□□□ -0.63
SNHG17-204	ENST00000423536	BTBD11	A6QL63	1104 aa		11.09	□□□□□ -0.63
SNHG17-204	ENST00000423536	GNAT3	A8MTJ3	354 aa		11.09	□□□□□ -0.63
SNHG17-204	ENST00000423536	KLRG2	A4D1S0	409 aa	Predicted RBP	11.08	□□□□□ -0.64
SNHG17-204	ENST00000423536	TRPA1	O75762	1119 aa		11.08	□□□□□ -0.64
SNHG17-204	ENST00000423536	PIP4K2A	P48426	406 aa	Predicted RBP	11.08	□□□□□ -0.64
SNHG17-204	ENST00000423536	SCNN1D	P51172	638 aa		11.08	□□□□□ -0.64
SNHG17-204	ENST00000423536	HUNK	P57058	714 aa		11.08	□□□□□ -0.64
SNHG17-204	ENST00000423536	C2orf69	Q8N8R5	385 aa		11.08	□□□□□ -0.64
SNHG17-204	ENST00000423536	CCDC102A	Q96A19	550 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms