RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 ZNF622Q969S3 477 aaKnown RBP eCLIP33.53■■■□□ 2.96
SMDT1-202ENST00000422252 RNF181Q9P0P0 153 aa33.53■■■□□ 2.96
SMDT1-202ENST00000422252 BABAM1Q9NWV8 329 aa33.52■■■□□ 2.96
SMDT1-202ENST00000422252 RRP7AQ9Y3A4 280 aaKnown RBP33.52■■■□□ 2.96
SMDT1-202ENST00000422252 RUNDC1Q96C34 613 aa33.51■■■□□ 2.95
SMDT1-202ENST00000422252 NIP7Q9Y221 180 aaKnown RBP eCLIP33.51■■■□□ 2.95
SMDT1-202ENST00000422252 KIF3CO14782 793 aa33.5■■■□□ 2.95
SMDT1-202ENST00000422252 NGEFQ8N5V2 710 aa33.5■■■□□ 2.95
SMDT1-202ENST00000422252 COL11A2P13942 1736 aaPredicted RBP33.5■■■□□ 2.95
SMDT1-202ENST00000422252 RASSF7Q02833 373 aa33.49■■■□□ 2.95
SMDT1-202ENST00000422252 NEUROD2Q15784 382 aa33.49■■■□□ 2.95
SMDT1-202ENST00000422252 HLFQ16534 295 aa33.49■■■□□ 2.95
SMDT1-202ENST00000422252 ADAMTS8Q9UP79 889 aa33.49■■■□□ 2.95
SMDT1-202ENST00000422252 SBF1O95248 1867 aa33.47■■■□□ 2.95
SMDT1-202ENST00000422252 ERVV-1B6SEH8 477 aa33.46■■■□□ 2.95
SMDT1-202ENST00000422252 MYL6BP14649 208 aa33.46■■■□□ 2.95
SMDT1-202ENST00000422252 TPTE2Q6XPS3 522 aa33.46■■■□□ 2.95
SMDT1-202ENST00000422252 ERBB4Q15303 1308 aa33.46■■■□□ 2.95
SMDT1-202ENST00000422252 SRGNP10124 158 aa33.45■■■□□ 2.95
SMDT1-202ENST00000422252 STYK1Q6J9G0 422 aa33.45■■■□□ 2.95
SMDT1-202ENST00000422252 KIF6Q6ZMV9 814 aa33.45■■■□□ 2.95
SMDT1-202ENST00000422252 MAP3K15Q6ZN16 1313 aa33.45■■■□□ 2.95
SMDT1-202ENST00000422252 LMNB1P20700 586 aa33.44■■■□□ 2.94
SMDT1-202ENST00000422252 ZEB1P37275 1124 aaPredicted RBP33.44■■■□□ 2.94
SMDT1-202ENST00000422252 CNKSR1Q969H4 720 aa33.44■■■□□ 2.94
SMDT1-202ENST00000422252 TTLL7Q6ZT98 887 aa33.43■■■□□ 2.94
SMDT1-202ENST00000422252 MASTLQ96GX5 879 aa33.43■■■□□ 2.94
SMDT1-202ENST00000422252 TRIM35Q9UPQ4 493 aa33.43■■■□□ 2.94
SMDT1-202ENST00000422252 FAM177BA6PVY3 158 aa33.42■■■□□ 2.94
SMDT1-202ENST00000422252 C21orf2O43822 256 aa33.42■■■□□ 2.94
SMDT1-202ENST00000422252 NMRK2Q9NPI5 230 aa33.42■■■□□ 2.94
SMDT1-202ENST00000422252 NFKBIEO00221 500 aa33.41■■■□□ 2.94
SMDT1-202ENST00000422252 ZNF219Q9P2Y4 722 aaPredicted RBP33.41■■■□□ 2.94
SMDT1-202ENST00000422252 ZC3H4Q9UPT8 1303 aaKnown RBP33.4■■■□□ 2.94
SMDT1-202ENST00000422252 EIF2S2P20042 333 aaKnown RBP33.4■■■□□ 2.94
SMDT1-202ENST00000422252 PRELPP51888 382 aa33.4■■■□□ 2.94
SMDT1-202ENST00000422252 KDM2BQ8NHM5 1336 aa33.39■■■□□ 2.94
SMDT1-202ENST00000422252 KLRG2A4D1S0 409 aaPredicted RBP33.39■■■□□ 2.94
SMDT1-202ENST00000422252 CHL1O00533 1208 aa33.38■■■□□ 2.93
SMDT1-202ENST00000422252 PRPF40BQ6NWY9 871 aaKnown RBP33.38■■■□□ 2.93
SMDT1-202ENST00000422252 ZBTB3Q9H5J0 574 aa33.38■■■□□ 2.93
SMDT1-202ENST00000422252 NUP98P52948 1817 aa33.37■■■□□ 2.93
SMDT1-202ENST00000422252 GTF2E1P29083 439 aaPredicted RBP33.37■■■□□ 2.93
SMDT1-202ENST00000422252 TOMM70O94826 608 aa33.36■■■□□ 2.93
SMDT1-202ENST00000422252 NPR1P16066 1061 aa33.36■■■□□ 2.93
SMDT1-202ENST00000422252 PDIA6Q15084 440 aa33.36■■■□□ 2.93
SMDT1-202ENST00000422252 NYXQ9GZU5 481 aa33.36■■■□□ 2.93
SMDT1-202ENST00000422252 SLX4Q8IY92 1834 aa33.35■■■□□ 2.93
SMDT1-202ENST00000422252 LRP10Q7Z4F1 713 aa33.35■■■□□ 2.93
SMDT1-202ENST00000422252 LAS1LQ9Y4W2 734 aaKnown RBP33.35■■■□□ 2.93
SMDT1-202ENST00000422252 ARFGEF2Q9Y6D5 1785 aa33.34■■■□□ 2.93
SMDT1-202ENST00000422252 HSPA6P17066 643 aa33.33■■■□□ 2.93
SMDT1-202ENST00000422252 SOGA3Q5TF21 947 aa33.33■■■□□ 2.93
SMDT1-202ENST00000422252 FER1L6Q2WGJ9 1857 aa33.33■■■□□ 2.93
SMDT1-202ENST00000422252 GPTP24298 496 aa33.32■■■□□ 2.92
SMDT1-202ENST00000422252 CACNA1SQ13698 1873 aa33.32■■■□□ 2.92
SMDT1-202ENST00000422252 PROSER3Q2NL68 480 aa33.32■■■□□ 2.92
SMDT1-202ENST00000422252 GIGYF2Q6Y7W6 1299 aaKnown RBP33.32■■■□□ 2.92
SMDT1-202ENST00000422252 UBN2Q6ZU65 1347 aa33.31■■■□□ 2.92
SMDT1-202ENST00000422252 ZNF34Q8IZ26 560 aa33.31■■■□□ 2.92
SMDT1-202ENST00000422252 TAOK3Q9H2K8 898 aa33.31■■■□□ 2.92
SMDT1-202ENST00000422252 IBTKQ9P2D0 1353 aaPredicted RBP33.31■■■□□ 2.92
SMDT1-202ENST00000422252 CCDC88AQ3V6T2 1871 aa33.31■■■□□ 2.92
SMDT1-202ENST00000422252 LTBP3Q9NS15 1303 aa33.3■■■□□ 2.92
SMDT1-202ENST00000422252 ANXA1P04083 346 aa33.3■■■□□ 2.92
SMDT1-202ENST00000422252 NUTM1Q86Y26 1132 aa33.3■■■□□ 2.92
SMDT1-202ENST00000422252 NECTIN2Q92692 538 aa33.3■■■□□ 2.92
SMDT1-202ENST00000422252 RRAGCQ9HB90 399 aa33.3■■■□□ 2.92
SMDT1-202ENST00000422252 TIAM2Q8IVF5 1701 aa33.29■■■□□ 2.92
SMDT1-202ENST00000422252 KRT24Q2M2I5 525 aa33.29■■■□□ 2.92
SMDT1-202ENST00000422252 C16orf71Q8IYS4 520 aaPredicted RBP33.29■■■□□ 2.92
SMDT1-202ENST00000422252 ABCC12Q96J65 1359 aa33.29■■■□□ 2.92
SMDT1-202ENST00000422252 GLTPD2A6NH11 291 aa33.28■■■□□ 2.92
SMDT1-202ENST00000422252 ERFEQ4G0M1 354 aa33.28■■■□□ 2.92
SMDT1-202ENST00000422252 C7orf43Q8WVR3 580 aa33.28■■■□□ 2.92
SMDT1-202ENST00000422252 CFAP44Q96MT7 982 aa33.28■■■□□ 2.92
SMDT1-202ENST00000422252 TNRC6CQ9HCJ0 1690 aaKnown RBP33.28■■■□□ 2.92
SMDT1-202ENST00000422252 APAF1O14727 1248 aa33.27■■■□□ 2.92
SMDT1-202ENST00000422252 SUSD4Q5VX71 490 aa33.27■■■□□ 2.92
SMDT1-202ENST00000422252 ALDH1B1P30837 517 aa33.26■■■□□ 2.91
SMDT1-202ENST00000422252 RBM46Q8TBY0 533 aaKnown RBP33.26■■■□□ 2.91
SMDT1-202ENST00000422252 CRY2Q49AN0 593 aa33.25■■■□□ 2.91
SMDT1-202ENST00000422252 CCDC93Q567U6 631 aa33.25■■■□□ 2.91
SMDT1-202ENST00000422252 DDX21Q9NR30 783 aaKnown RBP eCLIP33.25■■■□□ 2.91
SMDT1-202ENST00000422252 RIC1Q4ADV7 1423 aa33.25■■■□□ 2.91
SMDT1-202ENST00000422252 HOXB7P09629 217 aa33.24■■■□□ 2.91
SMDT1-202ENST00000422252 PARP10Q53GL7 1025 aa33.24■■■□□ 2.91
SMDT1-202ENST00000422252 COPS6Q7L5N1 327 aa33.24■■■□□ 2.91
SMDT1-202ENST00000422252 PPP1R42Q7Z4L9 355 aa33.24■■■□□ 2.91
SMDT1-202ENST00000422252 XAGE3Q8WTP9 111 aa33.24■■■□□ 2.91
SMDT1-202ENST00000422252 NTSR2O95665 410 aa33.23■■■□□ 2.91
SMDT1-202ENST00000422252 AIMP1Q12904 312 aaKnown RBP33.22■■■□□ 2.91
SMDT1-202ENST00000422252 CEP350Q5VT06 3117 aa33.22■■■□□ 2.91
SMDT1-202ENST00000422252 DICER1Q9UPY3 1922 aaKnown RBP33.22■■■□□ 2.91
SMDT1-202ENST00000422252 HDGFL1Q5TGJ6 251 aa33.21■■■□□ 2.91
SMDT1-202ENST00000422252 DPY19L2Q6NUT2 758 aa33.21■■■□□ 2.91
SMDT1-202ENST00000422252 MBIPQ9NS73 344 aa33.21■■■□□ 2.91
SMDT1-202ENST00000422252 CHPF2Q9P2E5 772 aa33.2■■■□□ 2.91
SMDT1-202ENST00000422252 ZNF853P0CG23 659 aa33.19■■■□□ 2.9
SMDT1-202ENST00000422252 CALD1Q05682 793 aaKnown RBP33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms