RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 GNAI2P04899 355 aa18.06■□□□□ 0.48
SEMA4D-204ENST00000420101 KLHL40Q2TBA0 621 aa18.06■□□□□ 0.48
SEMA4D-204ENST00000420101 MAP3K2Q9Y2U5 619 aa18.06■□□□□ 0.48
SEMA4D-204ENST00000420101 MFAP1P55081 439 aaKnown RBP18.05■□□□□ 0.48
SEMA4D-204ENST00000420101 RPAP2Q8IXW5 612 aaPredicted RBP18.05■□□□□ 0.48
SEMA4D-204ENST00000420101 SMAP1Q8IYB5 467 aaPredicted RBP18.05■□□□□ 0.48
SEMA4D-204ENST00000420101 GCC1Q96CN9 775 aa18.05■□□□□ 0.48
SEMA4D-204ENST00000420101 PIP4K2AP48426 406 aaPredicted RBP18.05■□□□□ 0.48
SEMA4D-204ENST00000420101 KSR2Q6VAB6 950 aa18.05■□□□□ 0.48
SEMA4D-204ENST00000420101 RIC3Q7Z5B4 369 aa18.05■□□□□ 0.48
SEMA4D-204ENST00000420101 SPATA31A6Q5VVP1 1343 aa18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 CACNA1FO60840 1977 aa18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 UBTFL1P0CB47 393 aaPredicted RBP18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 ZNF445P59923 1031 aa18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 ANKRD45Q5TZF3 282 aa18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 SIRT2Q8IXJ6 389 aa18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 ANKRD44Q8N8A2 993 aa18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 PIGBQ92521 554 aa18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 PXDNLA1KZ92 1463 aa18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 SHANK3Q9BYB0 1731 aa18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 SLIT2O94813 1529 aa18.04■□□□□ 0.48
SEMA4D-204ENST00000420101 HMMRO75330 724 aa18.03■□□□□ 0.48
SEMA4D-204ENST00000420101 HSPA1LP34931 641 aa18.03■□□□□ 0.48
SEMA4D-204ENST00000420101 PDIA6Q15084 440 aa18.03■□□□□ 0.48
SEMA4D-204ENST00000420101 CEP85Q6P2H3 762 aa18.03■□□□□ 0.48
SEMA4D-204ENST00000420101 GAS2L3Q86XJ1 694 aa18.03■□□□□ 0.48
SEMA4D-204ENST00000420101 XAGE3Q8WTP9 111 aa18.03■□□□□ 0.48
SEMA4D-204ENST00000420101 RBM42Q9BTD8 480 aaKnown RBP18.03■□□□□ 0.48
SEMA4D-204ENST00000420101 TNS2Q63HR2 1409 aa18.03■□□□□ 0.48
SEMA4D-204ENST00000420101 DYNC1I1O14576 645 aa18.02■□□□□ 0.48
SEMA4D-204ENST00000420101 COPS6Q7L5N1 327 aa18.02■□□□□ 0.48
SEMA4D-204ENST00000420101 NOL7Q9UMY1 257 aaKnown RBP18.02■□□□□ 0.48
SEMA4D-204ENST00000420101 ADCY9O60503 1353 aa18.02■□□□□ 0.48
SEMA4D-204ENST00000420101 BEND3Q5T5X7 828 aa18.02■□□□□ 0.47
SEMA4D-204ENST00000420101 SPRYD3Q8NCJ5 442 aa18.02■□□□□ 0.47
SEMA4D-204ENST00000420101 LNPKQ9C0E8 428 aa18.02■□□□□ 0.47
SEMA4D-204ENST00000420101 ASAP1Q9ULH1 1129 aa18.02■□□□□ 0.47
SEMA4D-204ENST00000420101 NRAPQ86VF7 1730 aa18.02■□□□□ 0.47
SEMA4D-204ENST00000420101 FAM98CQ17RN3 349 aaKnown RBP18.01■□□□□ 0.47
SEMA4D-204ENST00000420101 BARGINQ6ZT62 677 aa18.01■□□□□ 0.47
SEMA4D-204ENST00000420101 USP21Q9UK80 565 aa18.01■□□□□ 0.47
SEMA4D-204ENST00000420101 PRDM4Q9UKN5 801 aa18.01■□□□□ 0.47
SEMA4D-204ENST00000420101 C5P01031 1676 aa18.01■□□□□ 0.47
SEMA4D-204ENST00000420101 NUCB1Q02818 461 aa18■□□□□ 0.47
SEMA4D-204ENST00000420101 NEXNQ0ZGT2 675 aa18■□□□□ 0.47
SEMA4D-204ENST00000420101 CHD1LQ86WJ1 897 aa18■□□□□ 0.47
SEMA4D-204ENST00000420101 LRRFIP2Q9Y608 721 aaKnown RBP18■□□□□ 0.47
SEMA4D-204ENST00000420101 PRIM1P49642 420 aaKnown RBP18■□□□□ 0.47
SEMA4D-204ENST00000420101 VPS72Q15906 364 aa18■□□□□ 0.47
SEMA4D-204ENST00000420101 USP44Q9H0E7 712 aa18■□□□□ 0.47
SEMA4D-204ENST00000420101 C9orf78Q9NZ63 289 aaPredicted RBP18■□□□□ 0.47
SEMA4D-204ENST00000420101 NWD2Q9ULI1 1742 aa17.99■□□□□ 0.47
SEMA4D-204ENST00000420101 ACSBG1Q96GR2 724 aa17.99■□□□□ 0.47
SEMA4D-204ENST00000420101 ATG3Q9NT62 314 aa17.99■□□□□ 0.47
SEMA4D-204ENST00000420101 APBB1O00213 710 aa17.98■□□□□ 0.47
SEMA4D-204ENST00000420101 ANKRD13DQ6ZTN6 518 aa17.98■□□□□ 0.47
SEMA4D-204ENST00000420101 PDLIM2Q96JY6 352 aa17.98■□□□□ 0.47
SEMA4D-204ENST00000420101 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
SEMA4D-204ENST00000420101 K7ELQ4 463 aaPredicted RBP17.98■□□□□ 0.47
SEMA4D-204ENST00000420101 ALDH1L1O75891 902 aa17.98■□□□□ 0.47
SEMA4D-204ENST00000420101 A1BGP04217 495 aa17.98■□□□□ 0.47
SEMA4D-204ENST00000420101 BMP2KLQ5H9B9 411 aa17.98■□□□□ 0.47
SEMA4D-204ENST00000420101 ZNF330Q9Y3S2 320 aaPredicted RBP17.98■□□□□ 0.47
SEMA4D-204ENST00000420101 CWF19L2Q2TBE0 894 aaKnown RBP17.97■□□□□ 0.47
SEMA4D-204ENST00000420101 FNBP4Q8N3X1 1017 aaPredicted RBP17.97■□□□□ 0.47
SEMA4D-204ENST00000420101 MYD88Q99836 296 aa17.97■□□□□ 0.47
SEMA4D-204ENST00000420101 TEX13AQ9BXU3 409 aaPredicted RBP17.97■□□□□ 0.47
SEMA4D-204ENST00000420101 DCTPP1Q9H773 170 aa17.97■□□□□ 0.47
SEMA4D-204ENST00000420101 TOGARAM1Q9Y4F4 1720 aa17.96■□□□□ 0.47
SEMA4D-204ENST00000420101 NUCB2P80303 420 aa17.96■□□□□ 0.47
SEMA4D-204ENST00000420101 MARCH10Q8NA82 808 aaPredicted RBP17.96■□□□□ 0.47
SEMA4D-204ENST00000420101 LINS1Q8NG48 757 aa17.96■□□□□ 0.47
SEMA4D-204ENST00000420101 PODXL2Q9NZ53 605 aa17.96■□□□□ 0.47
SEMA4D-204ENST00000420101 KCPQ6ZWJ8 1503 aa17.96■□□□□ 0.47
SEMA4D-204ENST00000420101 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 NCLP19338 710 aaKnown RBP17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 UTP14CQ5TAP6 766 aaKnown RBP17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 HDAC5Q9UQL6 1122 aa17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 BCL9O00512 1426 aa17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 WNK3Q9BYP7 1800 aa17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 STARD3NLO95772 234 aa17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 ATP8B2P98198 1209 aa17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 DNAJC10Q8IXB1 793 aa17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 LRP6O75581 1613 aa17.95■□□□□ 0.46
SEMA4D-204ENST00000420101 METTL22Q9BUU2 404 aaPredicted RBP17.94■□□□□ 0.46
SEMA4D-204ENST00000420101 NBPF26B4DH59 902 aa17.93■□□□□ 0.46
SEMA4D-204ENST00000420101 NBPF14Q5TI25 921 aa17.93■□□□□ 0.46
SEMA4D-204ENST00000420101 NBPF10Q6P3W6 841 aaKnown RBP17.93■□□□□ 0.46
SEMA4D-204ENST00000420101 NBPF15Q8N660 670 aa17.93■□□□□ 0.46
SEMA4D-204ENST00000420101 DDX49Q9Y6V7 483 aaKnown RBP17.93■□□□□ 0.46
SEMA4D-204ENST00000420101 PNMA6EA0A0J9YXQ4 647 aa17.93■□□□□ 0.46
SEMA4D-204ENST00000420101 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
SEMA4D-204ENST00000420101 PAPPAQ13219 1627 aa17.92■□□□□ 0.46
SEMA4D-204ENST00000420101 LRP10Q7Z4F1 713 aa17.92■□□□□ 0.46
SEMA4D-204ENST00000420101 KAT6BQ8WYB5 2073 aa17.92■□□□□ 0.46
SEMA4D-204ENST00000420101 LAMB4A4D0S4 1761 aa17.92■□□□□ 0.46
SEMA4D-204ENST00000420101 SASS6Q6UVJ0 657 aa17.91■□□□□ 0.46
SEMA4D-204ENST00000420101 CCDC39Q9UFE4 941 aa17.91■□□□□ 0.46
SEMA4D-204ENST00000420101 EXOC6BQ9Y2D4 811 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms