RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TRIM22Q8IYM9 498 aa4.79□□□□□ -1.64
VPS41-206ENST00000418457 HELQQ8TDG4 1101 aa4.79□□□□□ -1.64
VPS41-206ENST00000418457 C7orf43Q8WVR3 580 aa4.79□□□□□ -1.64
VPS41-206ENST00000418457 GMCL1Q96IK5 515 aa4.79□□□□□ -1.64
VPS41-206ENST00000418457 NUCKS1Q9H1E3 243 aaKnown RBP4.79□□□□□ -1.64
VPS41-206ENST00000418457 KLK14Q9P0G3 267 aa4.79□□□□□ -1.64
VPS41-206ENST00000418457 ANKIB1Q9P2G1 1089 aa4.79□□□□□ -1.64
VPS41-206ENST00000418457 NXF1Q9UBU9 619 aaKnown RBP4.79□□□□□ -1.64
VPS41-206ENST00000418457 LRFN2Q9ULH4 789 aa4.79□□□□□ -1.64
VPS41-206ENST00000418457 ZBTB7CA1YPR0 619 aa4.78□□□□□ -1.64
VPS41-206ENST00000418457 CDC14CA4D256 554 aa4.78□□□□□ -1.64
VPS41-206ENST00000418457 FKBP4Q02790 459 aaKnown RBP eCLIP4.78□□□□□ -1.64
VPS41-206ENST00000418457 ZNF211Q13398 564 aaPredicted RBP4.78□□□□□ -1.64
VPS41-206ENST00000418457 SF3B2Q13435 895 aaKnown RBP4.78□□□□□ -1.64
VPS41-206ENST00000418457 DBN1Q16643 649 aa4.78□□□□□ -1.64
VPS41-206ENST00000418457 FIGNL1Q6PIW4 674 aa4.78□□□□□ -1.64
VPS41-206ENST00000418457 LRRC69Q6ZNQ3 347 aa4.78□□□□□ -1.64
VPS41-206ENST00000418457 ZNF837Q96EG3 531 aaPredicted RBP4.78□□□□□ -1.64
VPS41-206ENST00000418457 HSH2DQ96JZ2 352 aa4.78□□□□□ -1.64
VPS41-206ENST00000418457 SUSD3Q96L08 255 aa4.78□□□□□ -1.64
VPS41-206ENST00000418457 CUEDC1Q9NWM3 386 aaPredicted RBP4.78□□□□□ -1.64
VPS41-206ENST00000418457 EGFL7Q9UHF1 273 aa4.78□□□□□ -1.64
VPS41-206ENST00000418457 DNMT3AQ9Y6K1 912 aaPredicted RBP4.78□□□□□ -1.64
VPS41-206ENST00000418457 TGFBR3LH3BV60 316 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 TNFRSF10BO14763 440 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 MTMR3Q13615 1198 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 SAMD5Q5TGI4 173 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 IER5Q5VY09 327 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 SV2AQ7L0J3 742 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 NPAS3Q8IXF0 933 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 ABTB2Q8N961 1025 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 ZNF280CQ8ND82 737 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 KLRG1Q96E93 195 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 IFT43Q96FT9 208 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 ANO2Q9NQ90 1003 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 STIM2Q9P246 746 aa4.77□□□□□ -1.65
VPS41-206ENST00000418457 H3BRB1 525 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 ATXN7O15265 892 aaPredicted RBP4.76□□□□□ -1.65
VPS41-206ENST00000418457 ICMTO60725 284 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 THBS1P07996 1170 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 MPSTP25325 297 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 VEGFBP49765 207 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 FOXR1Q6PIV2 292 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 TREML1Q86YW5 311 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 GLYCTKQ8IVS8 523 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 VWA5B2Q8N398 1253 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 NANOS1Q8WY41 292 aaKnown RBP4.76□□□□□ -1.65
VPS41-206ENST00000418457 ZCCHC2Q9C0B9 1178 aaKnown RBP4.76□□□□□ -1.65
VPS41-206ENST00000418457 TUT1Q9H6E5 874 aaKnown RBP4.76□□□□□ -1.65
VPS41-206ENST00000418457 BCS1LQ9Y276 419 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 PCDHGC4Q9Y5F7 938 aa4.76□□□□□ -1.65
VPS41-206ENST00000418457 SOWAHDA6NJG2 315 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 H3BM21 787 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 TERTO14746 1132 aaKnown RBP4.75□□□□□ -1.65
VPS41-206ENST00000418457 MICAL2O94851 1124 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 FAM13AO94988 1023 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 IDH3AP50213 366 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 UBAP2LQ14157 1087 aaKnown RBP4.75□□□□□ -1.65
VPS41-206ENST00000418457 ALKBH2Q6NS38 261 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 BTLAQ7Z6A9 289 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 ETFBKMTQ8IXQ9 262 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 SLC16A10Q8TF71 515 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 GTPBP3Q969Y2 492 aaKnown RBP4.75□□□□□ -1.65
VPS41-206ENST00000418457 CEP63Q96MT8 703 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 TRERF1Q96PN7 1200 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 PHF24Q9UPV7 400 aa4.75□□□□□ -1.65
VPS41-206ENST00000418457 DCDC2BA2VCK2 349 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 GPR25O00155 361 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 KHNYNO15037 678 aaKnown RBP4.74□□□□□ -1.65
VPS41-206ENST00000418457 FAM157BP0CG42 384 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 NPR3P17342 541 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 ZAP70P43403 619 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 EIF1AXP47813 144 aaKnown RBP4.74□□□□□ -1.65
VPS41-206ENST00000418457 ARSDP51689 593 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 TYRO3Q06418 890 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 AAMPQ13685 434 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 NOM1Q5C9Z4 860 aaKnown RBP4.74□□□□□ -1.65
VPS41-206ENST00000418457 FAM26DQ5JW98 314 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 GZF1Q9H116 711 aaPredicted RBP4.74□□□□□ -1.65
VPS41-206ENST00000418457 BRD7Q9NPI1 651 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 FAM13BQ9NYF5 915 aa4.74□□□□□ -1.65
VPS41-206ENST00000418457 BIN2Q9UBW5 565 aaPredicted RBP4.74□□□□□ -1.65
VPS41-206ENST00000418457 DMGDHQ9UI17 866 aaKnown RBP4.74□□□□□ -1.65
VPS41-206ENST00000418457 ZBTB39O15060 712 aa4.73□□□□□ -1.65
VPS41-206ENST00000418457 BNIP3LO60238 219 aa4.73□□□□□ -1.65
VPS41-206ENST00000418457 MAPTP10636 758 aaKnown RBP4.73□□□□□ -1.65
VPS41-206ENST00000418457 EPB42P16452 691 aa4.73□□□□□ -1.65
VPS41-206ENST00000418457 TNP2Q05952 138 aa4.73□□□□□ -1.65
VPS41-206ENST00000418457 TRIM26Q12899 539 aaPredicted RBP4.73□□□□□ -1.65
VPS41-206ENST00000418457 ABHD17AQ96GS6 310 aa4.73□□□□□ -1.65
VPS41-206ENST00000418457 CFHR5Q9BXR6 569 aa4.73□□□□□ -1.65
VPS41-206ENST00000418457 NDFIP2Q9NV92 336 aa4.73□□□□□ -1.65
VPS41-206ENST00000418457 ATXN7L1Q9ULK2 861 aaPredicted RBP4.73□□□□□ -1.65
VPS41-206ENST00000418457 OPLAHO14841 1288 aa4.72□□□□□ -1.65
VPS41-206ENST00000418457 EFSO43281 561 aa4.72□□□□□ -1.65
VPS41-206ENST00000418457 VSIG8P0DPA2 414 aa4.72□□□□□ -1.65
VPS41-206ENST00000418457 INPP5BP32019 993 aa4.72□□□□□ -1.65
VPS41-206ENST00000418457 LAMC2Q13753 1193 aa4.72□□□□□ -1.65
VPS41-206ENST00000418457 SND1Q7KZF4 910 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS41-206ENST00000418457 RGL4Q8IZJ4 473 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms