RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 TOMM70O94826 608 aa24.25■■□□□ 1.47
VPS16-204ENST00000417508 LMNB1P20700 586 aa24.25■■□□□ 1.47
VPS16-204ENST00000417508 STYK1Q6J9G0 422 aa24.25■■□□□ 1.47
VPS16-204ENST00000417508 CNKSR1Q969H4 720 aa24.25■■□□□ 1.47
VPS16-204ENST00000417508 THUMPD2Q9BTF0 503 aaKnown RBP24.25■■□□□ 1.47
VPS16-204ENST00000417508 HSPA6P17066 643 aa24.24■■□□□ 1.47
VPS16-204ENST00000417508 ERVV-1B6SEH8 477 aa24.23■■□□□ 1.47
VPS16-204ENST00000417508 SRGNP10124 158 aa24.23■■□□□ 1.47
VPS16-204ENST00000417508 TMPOP42166 694 aaKnown RBP24.23■■□□□ 1.47
VPS16-204ENST00000417508 CCDC24Q8N4L8 307 aa24.23■■□□□ 1.47
VPS16-204ENST00000417508 MASTLQ96GX5 879 aa24.23■■□□□ 1.47
VPS16-204ENST00000417508 NIP7Q9Y221 180 aaKnown RBP eCLIP24.23■■□□□ 1.47
VPS16-204ENST00000417508 LAMB4A4D0S4 1761 aa24.23■■□□□ 1.47
VPS16-204ENST00000417508 NMRK2Q9NPI5 230 aa24.22■■□□□ 1.47
VPS16-204ENST00000417508 ERBB4Q15303 1308 aa24.21■■□□□ 1.47
VPS16-204ENST00000417508 TSPYL4Q9UJ04 414 aa24.21■■□□□ 1.47
VPS16-204ENST00000417508 KLRG2A4D1S0 409 aaPredicted RBP24.2■■□□□ 1.46
VPS16-204ENST00000417508 RASSF7Q02833 373 aa24.2■■□□□ 1.46
VPS16-204ENST00000417508 SOGA3Q5TF21 947 aa24.2■■□□□ 1.46
VPS16-204ENST00000417508 RRP7AQ9Y3A4 280 aaKnown RBP24.2■■□□□ 1.46
VPS16-204ENST00000417508 C21orf2O43822 256 aa24.19■■□□□ 1.46
VPS16-204ENST00000417508 WDR43Q15061 677 aaKnown RBP eCLIP24.19■■□□□ 1.46
VPS16-204ENST00000417508 CCDC88AQ3V6T2 1871 aa24.18■■□□□ 1.46
VPS16-204ENST00000417508 NFKBIEO00221 500 aa24.18■■□□□ 1.46
VPS16-204ENST00000417508 HLFQ16534 295 aa24.18■■□□□ 1.46
VPS16-204ENST00000417508 KIF6Q6ZMV9 814 aa24.18■■□□□ 1.46
VPS16-204ENST00000417508 C16orf71Q8IYS4 520 aaPredicted RBP24.18■■□□□ 1.46
VPS16-204ENST00000417508 RUNDC1Q96C34 613 aa24.18■■□□□ 1.46
VPS16-204ENST00000417508 MAP3K15Q6ZN16 1313 aa24.17■■□□□ 1.46
VPS16-204ENST00000417508 NPR1P16066 1061 aa24.17■■□□□ 1.46
VPS16-204ENST00000417508 NGEFQ8N5V2 710 aa24.17■■□□□ 1.46
VPS16-204ENST00000417508 RBM46Q8TBY0 533 aaKnown RBP24.17■■□□□ 1.46
VPS16-204ENST00000417508 NYXQ9GZU5 481 aa24.17■■□□□ 1.46
VPS16-204ENST00000417508 LTBP3Q9NS15 1303 aa24.16■■□□□ 1.46
VPS16-204ENST00000417508 GLTPD2A6NH11 291 aa24.16■■□□□ 1.46
VPS16-204ENST00000417508 GTF2E1P29083 439 aaPredicted RBP24.16■■□□□ 1.46
VPS16-204ENST00000417508 COL11A2P13942 1736 aaPredicted RBP24.15■■□□□ 1.46
VPS16-204ENST00000417508 PRELPP51888 382 aa24.15■■□□□ 1.46
VPS16-204ENST00000417508 PRPF40BQ6NWY9 871 aaKnown RBP24.15■■□□□ 1.46
VPS16-204ENST00000417508 PRKRIP1Q9H875 184 aaPredicted RBP24.15■■□□□ 1.46
VPS16-204ENST00000417508 RRAGCQ9HB90 399 aa24.15■■□□□ 1.46
VPS16-204ENST00000417508 NUP98P52948 1817 aa24.14■■□□□ 1.46
VPS16-204ENST00000417508 MYL6BP14649 208 aa24.14■■□□□ 1.45
VPS16-204ENST00000417508 FER1L6Q2WGJ9 1857 aa24.14■■□□□ 1.45
VPS16-204ENST00000417508 ZNF219Q9P2Y4 722 aaPredicted RBP24.14■■□□□ 1.45
VPS16-204ENST00000417508 SLX4Q8IY92 1834 aa24.14■■□□□ 1.45
VPS16-204ENST00000417508 DPY19L2Q6NUT2 758 aa24.13■■□□□ 1.45
VPS16-204ENST00000417508 TTLL7Q6ZT98 887 aa24.13■■□□□ 1.45
VPS16-204ENST00000417508 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
VPS16-204ENST00000417508 ALDH1B1P30837 517 aa24.12■■□□□ 1.45
VPS16-204ENST00000417508 APLP1P51693 650 aa24.12■■□□□ 1.45
VPS16-204ENST00000417508 FSTL1Q12841 308 aa24.12■■□□□ 1.45
VPS16-204ENST00000417508 NEUROD2Q15784 382 aa24.12■■□□□ 1.45
VPS16-204ENST00000417508 CCDC146Q8IYE0 955 aa24.12■■□□□ 1.45
VPS16-204ENST00000417508 C7orf43Q8WVR3 580 aa24.12■■□□□ 1.45
VPS16-204ENST00000417508 TAOK3Q9H2K8 898 aa24.12■■□□□ 1.45
VPS16-204ENST00000417508 DICER1Q9UPY3 1922 aaKnown RBP24.12■■□□□ 1.45
VPS16-204ENST00000417508 ARFGEF2Q9Y6D5 1785 aa24.11■■□□□ 1.45
VPS16-204ENST00000417508 FAM177BA6PVY3 158 aa24.11■■□□□ 1.45
VPS16-204ENST00000417508 CHL1O00533 1208 aa24.11■■□□□ 1.45
VPS16-204ENST00000417508 VEGFAP15692 232 aaPredicted RBP24.11■■□□□ 1.45
VPS16-204ENST00000417508 GIGYF2Q6Y7W6 1299 aaKnown RBP24.11■■□□□ 1.45
VPS16-204ENST00000417508 TNRC6CQ9HCJ0 1690 aaKnown RBP24.11■■□□□ 1.45
VPS16-204ENST00000417508 EIF2S2P20042 333 aaKnown RBP24.1■■□□□ 1.45
VPS16-204ENST00000417508 ERFEQ4G0M1 354 aa24.1■■□□□ 1.45
VPS16-204ENST00000417508 IBTKQ9P2D0 1353 aaPredicted RBP24.09■■□□□ 1.45
VPS16-204ENST00000417508 PDIA6Q15084 440 aa24.09■■□□□ 1.45
VPS16-204ENST00000417508 ZNF34Q8IZ26 560 aa24.09■■□□□ 1.45
VPS16-204ENST00000417508 ZBTB3Q9H5J0 574 aa24.09■■□□□ 1.45
VPS16-204ENST00000417508 TRIM35Q9UPQ4 493 aa24.09■■□□□ 1.45
VPS16-204ENST00000417508 CCDC93Q567U6 631 aa24.08■■□□□ 1.45
VPS16-204ENST00000417508 CACNA1SQ13698 1873 aa24.07■■□□□ 1.44
VPS16-204ENST00000417508 CRY2Q49AN0 593 aa24.07■■□□□ 1.44
VPS16-204ENST00000417508 PARP10Q53GL7 1025 aa24.07■■□□□ 1.44
VPS16-204ENST00000417508 LRP10Q7Z4F1 713 aa24.07■■□□□ 1.44
VPS16-204ENST00000417508 PPP1R42Q7Z4L9 355 aa24.07■■□□□ 1.44
VPS16-204ENST00000417508 RTKN2Q8IZC4 609 aa24.07■■□□□ 1.44
VPS16-204ENST00000417508 GPTP24298 496 aa24.05■■□□□ 1.44
VPS16-204ENST00000417508 ZEB1P37275 1124 aaPredicted RBP24.05■■□□□ 1.44
VPS16-204ENST00000417508 SUSD4Q5VX71 490 aa24.05■■□□□ 1.44
VPS16-204ENST00000417508 NUTM1Q86Y26 1132 aa24.05■■□□□ 1.44
VPS16-204ENST00000417508 SMC1BQ8NDV3 1235 aa24.05■■□□□ 1.44
VPS16-204ENST00000417508 TIAM2Q8IVF5 1701 aa24.04■■□□□ 1.44
VPS16-204ENST00000417508 RIC1Q4ADV7 1423 aa24.04■■□□□ 1.44
VPS16-204ENST00000417508 HOXB7P09629 217 aa24.04■■□□□ 1.44
VPS16-204ENST00000417508 DDX21Q9NR30 783 aaKnown RBP eCLIP24.04■■□□□ 1.44
VPS16-204ENST00000417508 LAS1LQ9Y4W2 734 aaKnown RBP24.04■■□□□ 1.44
VPS16-204ENST00000417508 UBN2Q6ZU65 1347 aa24.04■■□□□ 1.44
VPS16-204ENST00000417508 HOXA10P31260 410 aaPredicted RBP24.03■■□□□ 1.44
VPS16-204ENST00000417508 FKBP4Q02790 459 aaKnown RBP eCLIP24.03■■□□□ 1.44
VPS16-204ENST00000417508 HSP90AB3PQ58FF7 597 aa24.03■■□□□ 1.44
VPS16-204ENST00000417508 CC2D2BQ6DHV5 1058 aa24.03■■□□□ 1.44
VPS16-204ENST00000417508 CFAP44Q96MT7 982 aa24.03■■□□□ 1.44
VPS16-204ENST00000417508 CEP350Q5VT06 3117 aa24.03■■□□□ 1.44
VPS16-204ENST00000417508 GRIPAP1Q4V328 841 aa24.02■■□□□ 1.44
VPS16-204ENST00000417508 NTSR2O95665 410 aa24.01■■□□□ 1.43
VPS16-204ENST00000417508 PROSER3Q2NL68 480 aa24.01■■□□□ 1.43
VPS16-204ENST00000417508 SLC10A5Q5PT55 438 aa24.01■■□□□ 1.43
VPS16-204ENST00000417508 COPS6Q7L5N1 327 aa24.01■■□□□ 1.43
VPS16-204ENST00000417508 RPGRQ92834 1020 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 242.9 ms