RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 KIF6Q6ZMV9 814 aa15.3■□□□□ 0.04
ATG4B-207ENST00000415107 SRP68Q9UHB9 627 aaKnown RBP15.3■□□□□ 0.04
ATG4B-207ENST00000415107 ARFGEF2Q9Y6D5 1785 aa15.29■□□□□ 0.04
ATG4B-207ENST00000415107 IBTKQ9P2D0 1353 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-207ENST00000415107 ZBTB7AO95365 584 aa15.29■□□□□ 0.04
ATG4B-207ENST00000415107 ANXA1P04083 346 aa15.29■□□□□ 0.04
ATG4B-207ENST00000415107 TM4SF1P30408 202 aa15.29■□□□□ 0.04
ATG4B-207ENST00000415107 FKBP8Q14318 412 aa15.29■□□□□ 0.04
ATG4B-207ENST00000415107 GIGYF2Q6Y7W6 1299 aaKnown RBP15.29■□□□□ 0.04
ATG4B-207ENST00000415107 TTLL7Q6ZT98 887 aa15.29■□□□□ 0.04
ATG4B-207ENST00000415107 COPS6Q7L5N1 327 aa15.29■□□□□ 0.04
ATG4B-207ENST00000415107 XAGE3Q8WTP9 111 aa15.29■□□□□ 0.04
ATG4B-207ENST00000415107 NECTIN2Q92692 538 aa15.29■□□□□ 0.04
ATG4B-207ENST00000415107 TBC1D2BQ9UPU7 963 aa15.29■□□□□ 0.04
ATG4B-207ENST00000415107 MSH5O43196 834 aa15.28■□□□□ 0.04
ATG4B-207ENST00000415107 PLBD2Q8NHP8 589 aa15.28■□□□□ 0.04
ATG4B-207ENST00000415107 ZNF330Q9Y3S2 320 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-207ENST00000415107 CARMIL3Q8ND23 1372 aa15.27■□□□□ 0.04
ATG4B-207ENST00000415107 DDX58O95786 925 aaKnown RBP15.27■□□□□ 0.04
ATG4B-207ENST00000415107 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
ATG4B-207ENST00000415107 POLD1P28340 1107 aa15.27■□□□□ 0.04
ATG4B-207ENST00000415107 FLIIQ13045 1269 aa15.27■□□□□ 0.04
ATG4B-207ENST00000415107 HSP90AB3PQ58FF7 597 aa15.27■□□□□ 0.04
ATG4B-207ENST00000415107 KIF13BQ9NQT8 1826 aa15.27■□□□□ 0.03
ATG4B-207ENST00000415107 ANKRD13DQ6ZTN6 518 aa15.26■□□□□ 0.03
ATG4B-207ENST00000415107 MRPL50Q8N5N7 158 aaKnown RBP15.26■□□□□ 0.03
ATG4B-207ENST00000415107 PHAXQ9H814 394 aaKnown RBP15.26■□□□□ 0.03
ATG4B-207ENST00000415107 PTPRCP08575 1304 aa15.25■□□□□ 0.03
ATG4B-207ENST00000415107 RNF123Q5XPI4 1314 aa15.25■□□□□ 0.03
ATG4B-207ENST00000415107 POLRMTO00411 1230 aaKnown RBP15.25■□□□□ 0.03
ATG4B-207ENST00000415107 RARSP54136 660 aaKnown RBP15.25■□□□□ 0.03
ATG4B-207ENST00000415107 TRIM28Q13263 835 aaKnown RBP15.25■□□□□ 0.03
ATG4B-207ENST00000415107 NFIXQ14938 502 aa15.25■□□□□ 0.03
ATG4B-207ENST00000415107 HLFQ16534 295 aa15.25■□□□□ 0.03
ATG4B-207ENST00000415107 ZNF34Q8IZ26 560 aa15.25■□□□□ 0.03
ATG4B-207ENST00000415107 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
ATG4B-207ENST00000415107 PXDNLA1KZ92 1463 aa15.25■□□□□ 0.03
ATG4B-207ENST00000415107 RIC1Q4ADV7 1423 aa15.25■□□□□ 0.03
ATG4B-207ENST00000415107 C10orf71Q711Q0 1435 aa15.25■□□□□ 0.03
ATG4B-207ENST00000415107 ADCY9O60503 1353 aa15.24■□□□□ 0.03
ATG4B-207ENST00000415107 MMP10P09238 476 aa15.24■□□□□ 0.03
ATG4B-207ENST00000415107 DDR1Q08345 913 aa15.24■□□□□ 0.03
ATG4B-207ENST00000415107 PARP10Q53GL7 1025 aa15.24■□□□□ 0.03
ATG4B-207ENST00000415107 TBC1D9BQ66K14 1250 aa15.24■□□□□ 0.03
ATG4B-207ENST00000415107 KSR2Q6VAB6 950 aa15.24■□□□□ 0.03
ATG4B-207ENST00000415107 ZBTB3Q9H5J0 574 aa15.24■□□□□ 0.03
ATG4B-207ENST00000415107 AFDNP55196 1824 aaKnown RBP15.24■□□□□ 0.03
ATG4B-207ENST00000415107 N4BP2Q86UW6 1770 aaPredicted RBP15.24■□□□□ 0.03
ATG4B-207ENST00000415107 KIF16BQ96L93 1317 aa15.23■□□□□ 0.03
ATG4B-207ENST00000415107 TCIRG1Q13488 830 aa15.23■□□□□ 0.03
ATG4B-207ENST00000415107 MSL1Q68DK7 614 aa15.23■□□□□ 0.03
ATG4B-207ENST00000415107 G2E3Q7L622 706 aa15.23■□□□□ 0.03
ATG4B-207ENST00000415107 ISCA1Q9BUE6 129 aa15.23■□□□□ 0.03
ATG4B-207ENST00000415107 ATF5Q9Y2D1 282 aaPredicted RBP15.23■□□□□ 0.03
ATG4B-207ENST00000415107 AIMP1Q12904 312 aaKnown RBP15.22■□□□□ 0.03
ATG4B-207ENST00000415107 ARHGAP45Q92619 1136 aa15.22■□□□□ 0.03
ATG4B-207ENST00000415107 ARXQ96QS3 562 aa15.22■□□□□ 0.03
ATG4B-207ENST00000415107 SETDB2Q96T68 719 aa15.22■□□□□ 0.03
ATG4B-207ENST00000415107 METTL22Q9BUU2 404 aaPredicted RBP15.22■□□□□ 0.03
ATG4B-207ENST00000415107 PARP3Q9Y6F1 533 aa15.22■□□□□ 0.03
ATG4B-207ENST00000415107 UBN2Q6ZU65 1347 aa15.21■□□□□ 0.03
ATG4B-207ENST00000415107 PI4KAP2A4QPH2 592 aa15.21■□□□□ 0.03
ATG4B-207ENST00000415107 FKBP5Q13451 457 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-207ENST00000415107 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
ATG4B-207ENST00000415107 PI4KAP1Q8N8J0 262 aa15.21■□□□□ 0.03
ATG4B-207ENST00000415107 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
ATG4B-207ENST00000415107 NIP7Q9Y221 180 aaKnown RBP eCLIP15.21■□□□□ 0.03
ATG4B-207ENST00000415107 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
ATG4B-207ENST00000415107 SERPINB2P05120 415 aa15.2■□□□□ 0.02
ATG4B-207ENST00000415107 DNAAF4Q8WXU2 420 aa15.2■□□□□ 0.02
ATG4B-207ENST00000415107 NYXQ9GZU5 481 aa15.2■□□□□ 0.02
ATG4B-207ENST00000415107 CD2APQ9Y5K6 639 aa15.2■□□□□ 0.02
ATG4B-207ENST00000415107 KIAA1551Q9HCM1 1747 aa15.2■□□□□ 0.02
ATG4B-207ENST00000415107 SRCAPQ6ZRS2 3230 aa15.19■□□□□ 0.02
ATG4B-207ENST00000415107 NLRP10Q86W26 655 aa15.19■□□□□ 0.02
ATG4B-207ENST00000415107 CCDC191Q8NCU4 936 aa15.19■□□□□ 0.02
ATG4B-207ENST00000415107 MAP3K2Q9Y2U5 619 aa15.19■□□□□ 0.02
ATG4B-207ENST00000415107 NTSR2O95665 410 aa15.18■□□□□ 0.02
ATG4B-207ENST00000415107 NEXNQ0ZGT2 675 aa15.18■□□□□ 0.02
ATG4B-207ENST00000415107 PPP1R42Q7Z4L9 355 aa15.18■□□□□ 0.02
ATG4B-207ENST00000415107 PDZRN3Q9UPQ7 1066 aa15.18■□□□□ 0.02
ATG4B-207ENST00000415107 LAMB2P55268 1798 aa15.18■□□□□ 0.02
ATG4B-207ENST00000415107 ANKRD31Q8N7Z5 1873 aa15.17■□□□□ 0.02
ATG4B-207ENST00000415107 PRR5LQ6MZQ0 368 aa15.17■□□□□ 0.02
ATG4B-207ENST00000415107 TPTE2Q6XPS3 522 aa15.17■□□□□ 0.02
ATG4B-207ENST00000415107 CNBD1Q8NA66 436 aa15.17■□□□□ 0.02
ATG4B-207ENST00000415107 LINS1Q8NG48 757 aa15.17■□□□□ 0.02
ATG4B-207ENST00000415107 YTHDC1Q96MU7 727 aaKnown RBP15.17■□□□□ 0.02
ATG4B-207ENST00000415107 DLEC1Q9Y238 1755 aa15.16■□□□□ 0.02
ATG4B-207ENST00000415107 KLRG2A4D1S0 409 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-207ENST00000415107 IGKV5-2P06315 115 aa15.16■□□□□ 0.02
ATG4B-207ENST00000415107 BEND3Q5T5X7 828 aa15.16■□□□□ 0.02
ATG4B-207ENST00000415107 BICDL1Q6ZP65 573 aa15.16■□□□□ 0.02
ATG4B-207ENST00000415107 NBPF5PQ86XG9 351 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-207ENST00000415107 BCL2L13Q9BXK5 485 aa15.16■□□□□ 0.02
ATG4B-207ENST00000415107 API5Q9BZZ5 524 aaKnown RBP15.16■□□□□ 0.02
ATG4B-207ENST00000415107 NEURL1BA8MQ27 555 aa15.15■□□□□ 0.02
ATG4B-207ENST00000415107 IPO8O15397 1037 aaKnown RBP15.15■□□□□ 0.02
ATG4B-207ENST00000415107 GPTP24298 496 aa15.15■□□□□ 0.02
ATG4B-207ENST00000415107 TGFB2P61812 414 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms