RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ST5P78524 1137 aa14.6□□□□□ -0.07
RFFL-204ENST00000414419 CNBD1Q8NA66 436 aa14.6□□□□□ -0.07
RFFL-204ENST00000414419 CFAP44Q96MT7 982 aa14.6□□□□□ -0.07
RFFL-204ENST00000414419 PDE6BP35913 854 aa14.59□□□□□ -0.07
RFFL-204ENST00000414419 ARHGAP27Q6ZUM4 889 aa14.59□□□□□ -0.07
RFFL-204ENST00000414419 NBPF5PQ86XG9 351 aaPredicted RBP14.59□□□□□ -0.07
RFFL-204ENST00000414419 C2CD5Q86YS7 1000 aa14.59□□□□□ -0.07
RFFL-204ENST00000414419 ZNF784Q8NCA9 323 aaPredicted RBP14.59□□□□□ -0.07
RFFL-204ENST00000414419 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
RFFL-204ENST00000414419 NIP7Q9Y221 180 aaKnown RBP eCLIP14.59□□□□□ -0.07
RFFL-204ENST00000414419 GNAI1P63096 354 aa14.58□□□□□ -0.08
RFFL-204ENST00000414419 PRR5LQ6MZQ0 368 aa14.58□□□□□ -0.08
RFFL-204ENST00000414419 NECTIN2Q92692 538 aa14.58□□□□□ -0.08
RFFL-204ENST00000414419 BRIP1Q9BX63 1249 aa14.58□□□□□ -0.08
RFFL-204ENST00000414419 ERVV-1B6SEH8 477 aa14.57□□□□□ -0.08
RFFL-204ENST00000414419 GTF2E1P29083 439 aaPredicted RBP14.57□□□□□ -0.08
RFFL-204ENST00000414419 HLFQ16534 295 aa14.57□□□□□ -0.08
RFFL-204ENST00000414419 TPTE2Q6XPS3 522 aa14.57□□□□□ -0.08
RFFL-204ENST00000414419 CCDC24Q8N4L8 307 aa14.57□□□□□ -0.08
RFFL-204ENST00000414419 MAP3K15Q6ZN16 1313 aa14.57□□□□□ -0.08
RFFL-204ENST00000414419 DLEC1Q9Y238 1755 aa14.57□□□□□ -0.08
RFFL-204ENST00000414419 ANKRD31Q8N7Z5 1873 aa14.57□□□□□ -0.08
RFFL-204ENST00000414419 FAM177BA6PVY3 158 aa14.56□□□□□ -0.08
RFFL-204ENST00000414419 TTLL7Q6ZT98 887 aa14.56□□□□□ -0.08
RFFL-204ENST00000414419 TTLL6Q8N841 843 aa14.56□□□□□ -0.08
RFFL-204ENST00000414419 ZNF622Q969S3 477 aaKnown RBP eCLIP14.56□□□□□ -0.08
RFFL-204ENST00000414419 ZBTB3Q9H5J0 574 aa14.56□□□□□ -0.08
RFFL-204ENST00000414419 MBIPQ9NS73 344 aa14.56□□□□□ -0.08
RFFL-204ENST00000414419 IFT57Q9NWB7 429 aa14.56□□□□□ -0.08
RFFL-204ENST00000414419 HOXB7P09629 217 aa14.55□□□□□ -0.08
RFFL-204ENST00000414419 KRT24Q2M2I5 525 aa14.55□□□□□ -0.08
RFFL-204ENST00000414419 HDGFL1Q5TGJ6 251 aa14.55□□□□□ -0.08
RFFL-204ENST00000414419 ANXA1P04083 346 aa14.54□□□□□ -0.08
RFFL-204ENST00000414419 NYXQ9GZU5 481 aa14.54□□□□□ -0.08
RFFL-204ENST00000414419 DDX21Q9NR30 783 aaKnown RBP eCLIP14.54□□□□□ -0.08
RFFL-204ENST00000414419 CACNA1SQ13698 1873 aa14.53□□□□□ -0.08
RFFL-204ENST00000414419 SENP3-EIF4A1A0A087X0R7 540 aa14.53□□□□□ -0.08
RFFL-204ENST00000414419 ZNF853P0CG23 659 aa14.53□□□□□ -0.08
RFFL-204ENST00000414419 AIMP1Q12904 312 aaKnown RBP14.53□□□□□ -0.08
RFFL-204ENST00000414419 PDIA6Q15084 440 aa14.53□□□□□ -0.08
RFFL-204ENST00000414419 PROSER3Q2NL68 480 aa14.53□□□□□ -0.08
RFFL-204ENST00000414419 DUSP27Q5VZP5 1158 aa14.53□□□□□ -0.08
RFFL-204ENST00000414419 GIGYF2Q6Y7W6 1299 aaKnown RBP14.53□□□□□ -0.08
RFFL-204ENST00000414419 COPS6Q7L5N1 327 aa14.53□□□□□ -0.08
RFFL-204ENST00000414419 FAM9BQ8IZU0 186 aa14.53□□□□□ -0.08
RFFL-204ENST00000414419 GPTP24298 496 aa14.52□□□□□ -0.09
RFFL-204ENST00000414419 CCDC27Q2M243 656 aa14.52□□□□□ -0.09
RFFL-204ENST00000414419 CNKSR1Q969H4 720 aa14.52□□□□□ -0.09
RFFL-204ENST00000414419 CHMP4AQ9BY43 222 aa14.52□□□□□ -0.09
RFFL-204ENST00000414419 DBF4Q9UBU7 674 aaPredicted RBP14.52□□□□□ -0.09
RFFL-204ENST00000414419 ATP10DQ9P241 1426 aa14.51□□□□□ -0.09
RFFL-204ENST00000414419 ELL2O00472 640 aaPredicted RBP14.51□□□□□ -0.09
RFFL-204ENST00000414419 PPP1R42Q7Z4L9 355 aa14.51□□□□□ -0.09
RFFL-204ENST00000414419 XAGE3Q8WTP9 111 aa14.51□□□□□ -0.09
RFFL-204ENST00000414419 MASTLQ96GX5 879 aa14.51□□□□□ -0.09
RFFL-204ENST00000414419 CHPF2Q9P2E5 772 aa14.51□□□□□ -0.09
RFFL-204ENST00000414419 SBF1O95248 1867 aa14.5□□□□□ -0.09
RFFL-204ENST00000414419 CCDC88AQ3V6T2 1871 aa14.5□□□□□ -0.09
RFFL-204ENST00000414419 COL11A2P13942 1736 aaPredicted RBP14.5□□□□□ -0.09
RFFL-204ENST00000414419 SRGNP10124 158 aa14.5□□□□□ -0.09
RFFL-204ENST00000414419 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
RFFL-204ENST00000414419 HSP90AB3PQ58FF7 597 aa14.5□□□□□ -0.09
RFFL-204ENST00000414419 STYK1Q6J9G0 422 aa14.5□□□□□ -0.09
RFFL-204ENST00000414419 LRP10Q7Z4F1 713 aa14.5□□□□□ -0.09
RFFL-204ENST00000414419 WWC1Q8IX03 1113 aa14.5□□□□□ -0.09
RFFL-204ENST00000414419 GPBP1L1Q9HC44 474 aaPredicted RBP14.5□□□□□ -0.09
RFFL-204ENST00000414419 HYPKQ9NX55 129 aa14.5□□□□□ -0.09
RFFL-204ENST00000414419 SALL2Q9Y467 1007 aaPredicted RBP14.5□□□□□ -0.09
RFFL-204ENST00000414419 ANKRD36CQ5JPF3 1778 aa14.5□□□□□ -0.09
RFFL-204ENST00000414419 PARP10Q53GL7 1025 aa14.49□□□□□ -0.09
RFFL-204ENST00000414419 NUTM1Q86Y26 1132 aa14.49□□□□□ -0.09
RFFL-204ENST00000414419 ZNF34Q8IZ26 560 aa14.49□□□□□ -0.09
RFFL-204ENST00000414419 ZNF526Q8TF50 670 aaPredicted RBP14.49□□□□□ -0.09
RFFL-204ENST00000414419 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
RFFL-204ENST00000414419 C21orf2O43822 256 aa14.48□□□□□ -0.09
RFFL-204ENST00000414419 NPR1P16066 1061 aa14.48□□□□□ -0.09
RFFL-204ENST00000414419 SUSD4Q5VX71 490 aa14.48□□□□□ -0.09
RFFL-204ENST00000414419 C9orf131Q5VYM1 1079 aa14.48□□□□□ -0.09
RFFL-204ENST00000414419 SLX4Q8IY92 1834 aa14.48□□□□□ -0.09
RFFL-204ENST00000414419 ADCY9O60503 1353 aa14.47□□□□□ -0.09
RFFL-204ENST00000414419 IBTKQ9P2D0 1353 aaPredicted RBP14.47□□□□□ -0.09
RFFL-204ENST00000414419 UBN2Q6ZU65 1347 aa14.47□□□□□ -0.09
RFFL-204ENST00000414419 ERFEQ4G0M1 354 aa14.47□□□□□ -0.09
RFFL-204ENST00000414419 SOGA3Q5TF21 947 aa14.47□□□□□ -0.09
RFFL-204ENST00000414419 ANKRD13DQ6ZTN6 518 aa14.47□□□□□ -0.09
RFFL-204ENST00000414419 C8orf58Q8NAV2 365 aa14.47□□□□□ -0.09
RFFL-204ENST00000414419 UTP14AQ9BVJ6 771 aaKnown RBP14.47□□□□□ -0.09
RFFL-204ENST00000414419 RNF181Q9P0P0 153 aa14.47□□□□□ -0.09
RFFL-204ENST00000414419 ARFGEF2Q9Y6D5 1785 aa14.47□□□□□ -0.09
RFFL-204ENST00000414419 IL16Q14005 1332 aa14.46□□□□□ -0.09
RFFL-204ENST00000414419 KLRG2A4D1S0 409 aaPredicted RBP14.46□□□□□ -0.09
RFFL-204ENST00000414419 ALDH1B1P30837 517 aa14.46□□□□□ -0.09
RFFL-204ENST00000414419 TCIRG1Q13488 830 aa14.46□□□□□ -0.09
RFFL-204ENST00000414419 CCDC30Q5VVM6 783 aa14.46□□□□□ -0.09
RFFL-204ENST00000414419 PRPF40BQ6NWY9 871 aaKnown RBP14.46□□□□□ -0.09
RFFL-204ENST00000414419 WDR63Q8IWG1 891 aa14.46□□□□□ -0.09
RFFL-204ENST00000414419 PLBD2Q8NHP8 589 aa14.46□□□□□ -0.09
RFFL-204ENST00000414419 RPGRQ92834 1020 aaKnown RBP14.46□□□□□ -0.09
RFFL-204ENST00000414419 TSR2Q969E8 191 aaKnown RBP14.46□□□□□ -0.09
RFFL-204ENST00000414419 NTSR2O95665 410 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms