RNA–Protein interactions for RNA: ENST00000411896.6

GRAMD1A-202, Transcript of GRAM domain containing 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GRAMD1A, Length 2,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-202ENST00000411896 CLASRPQ8N2M8 674 aaKnown RBP20.27■□□□□ 0.84
GRAMD1A-202ENST00000411896 RPAP1Q9BWH6 1393 aaPredicted RBP20.27■□□□□ 0.84
GRAMD1A-202ENST00000411896 NAP1L5Q96NT1 182 aaPredicted RBP20.27■□□□□ 0.84
GRAMD1A-202ENST00000411896 SIPA1L3O60292 1781 aaPredicted RBP20.26■□□□□ 0.83
GRAMD1A-202ENST00000411896 AK2P54819 239 aa20.26■□□□□ 0.83
GRAMD1A-202ENST00000411896 FOXD4L6Q3SYB3 417 aaPredicted RBP20.26■□□□□ 0.83
GRAMD1A-202ENST00000411896 FOXD4L3Q6VB84 417 aaPredicted RBP20.26■□□□□ 0.83
GRAMD1A-202ENST00000411896 NPHP4O75161 1426 aaPredicted RBP20.26■□□□□ 0.83
GRAMD1A-202ENST00000411896 KIAA1211Q6ZU35 1233 aa20.26■□□□□ 0.83
GRAMD1A-202ENST00000411896 SUCLG2Q96I99 432 aa20.26■□□□□ 0.83
GRAMD1A-202ENST00000411896 LARP6Q9BRS8 491 aaKnown RBP20.26■□□□□ 0.83
GRAMD1A-202ENST00000411896 TRPM3Q9HCF6 1732 aaPredicted RBP20.25■□□□□ 0.83
GRAMD1A-202ENST00000411896 DIAPH3Q9NSV4 1193 aa20.25■□□□□ 0.83
GRAMD1A-202ENST00000411896 ECHDC1Q9NTX5 307 aa20.25■□□□□ 0.83
GRAMD1A-202ENST00000411896 RUFY3Q7L099 469 aa20.25■□□□□ 0.83
GRAMD1A-202ENST00000411896 KAZALD1Q96I82 304 aa20.25■□□□□ 0.83
GRAMD1A-202ENST00000411896 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
GRAMD1A-202ENST00000411896 CPA1P15085 419 aa20.24■□□□□ 0.83
GRAMD1A-202ENST00000411896 PTH1RQ03431 593 aa20.24■□□□□ 0.83
GRAMD1A-202ENST00000411896 GDPD2Q9HCC8 539 aa20.24■□□□□ 0.83
GRAMD1A-202ENST00000411896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.24■□□□□ 0.83
GRAMD1A-202ENST00000411896 WDR33Q9C0J8 1336 aaKnown RBP20.24■□□□□ 0.83
GRAMD1A-202ENST00000411896 IFIT2P09913 472 aaKnown RBP20.23■□□□□ 0.83
GRAMD1A-202ENST00000411896 AIMP1Q12904 312 aaKnown RBP20.23■□□□□ 0.83
GRAMD1A-202ENST00000411896 PDIA6Q15084 440 aa20.23■□□□□ 0.83
GRAMD1A-202ENST00000411896 KRT28Q7Z3Y7 464 aa20.23■□□□□ 0.83
GRAMD1A-202ENST00000411896 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
GRAMD1A-202ENST00000411896 ADAMTS7Q9UKP4 1686 aa20.23■□□□□ 0.83
GRAMD1A-202ENST00000411896 GRM8O00222 908 aa20.23■□□□□ 0.83
GRAMD1A-202ENST00000411896 GADD45BO75293 160 aaPredicted RBP20.23■□□□□ 0.83
GRAMD1A-202ENST00000411896 AACSQ86V21 672 aa20.23■□□□□ 0.83
GRAMD1A-202ENST00000411896 LINS1Q8NG48 757 aa20.23■□□□□ 0.83
GRAMD1A-202ENST00000411896 BICC1Q9H694 974 aaKnown RBP20.22■□□□□ 0.83
GRAMD1A-202ENST00000411896 DDX21Q9NR30 783 aaKnown RBP eCLIP20.22■□□□□ 0.83
GRAMD1A-202ENST00000411896 ZSCAN30Q86W11 494 aa20.22■□□□□ 0.83
GRAMD1A-202ENST00000411896 GPATCH3Q96I76 525 aa20.22■□□□□ 0.83
GRAMD1A-202ENST00000411896 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
GRAMD1A-202ENST00000411896 UTYO14607 1347 aa20.22■□□□□ 0.83
GRAMD1A-202ENST00000411896 RGPD5Q99666 1765 aa20.21■□□□□ 0.83
GRAMD1A-202ENST00000411896 SASH1O94885 1247 aa20.21■□□□□ 0.83
GRAMD1A-202ENST00000411896 CASTP20810 708 aaKnown RBP20.21■□□□□ 0.83
GRAMD1A-202ENST00000411896 USP48Q86UV5 1035 aa20.21■□□□□ 0.83
GRAMD1A-202ENST00000411896 RUFY2Q8WXA3 655 aa20.21■□□□□ 0.83
GRAMD1A-202ENST00000411896 PDLIM2Q96JY6 352 aa20.21■□□□□ 0.83
GRAMD1A-202ENST00000411896 LARGE1O95461 756 aa20.21■□□□□ 0.83
GRAMD1A-202ENST00000411896 SLC39A6Q13433 755 aa20.21■□□□□ 0.83
GRAMD1A-202ENST00000411896 LMTK3Q96Q04 1460 aa20.2■□□□□ 0.83
GRAMD1A-202ENST00000411896 HDAC5Q9UQL6 1122 aa20.2■□□□□ 0.82
GRAMD1A-202ENST00000411896 ERBB3P21860 1342 aa20.2■□□□□ 0.82
GRAMD1A-202ENST00000411896 PRPF40BQ6NWY9 871 aaKnown RBP20.2■□□□□ 0.82
GRAMD1A-202ENST00000411896 DDX58O95786 925 aaKnown RBP20.19■□□□□ 0.82
GRAMD1A-202ENST00000411896 IGKV5-2P06315 115 aa20.19■□□□□ 0.82
GRAMD1A-202ENST00000411896 ZC3H6P61129 1189 aaKnown RBP20.19■□□□□ 0.82
GRAMD1A-202ENST00000411896 ADCK5Q3MIX3 580 aa20.19■□□□□ 0.82
GRAMD1A-202ENST00000411896 EAF2Q96CJ1 260 aaPredicted RBP20.19■□□□□ 0.82
GRAMD1A-202ENST00000411896 EVI5LQ96CN4 794 aa20.19■□□□□ 0.82
GRAMD1A-202ENST00000411896 C5P01031 1676 aa20.18■□□□□ 0.82
GRAMD1A-202ENST00000411896 KCNB2Q92953 911 aa20.18■□□□□ 0.82
GRAMD1A-202ENST00000411896 JAKMIP1Q96N16 626 aaKnown RBP20.18■□□□□ 0.82
GRAMD1A-202ENST00000411896 CCDC8Q9H0W5 538 aaPredicted RBP20.18■□□□□ 0.82
GRAMD1A-202ENST00000411896 TLR7Q9NYK1 1049 aaKnown RBP20.18■□□□□ 0.82
GRAMD1A-202ENST00000411896 KDM6AO15550 1401 aaPredicted RBP20.18■□□□□ 0.82
GRAMD1A-202ENST00000411896 ZSCAN22P10073 491 aaPredicted RBP20.18■□□□□ 0.82
GRAMD1A-202ENST00000411896 G3BP1Q13283 466 aaKnown RBP eCLIP20.18■□□□□ 0.82
GRAMD1A-202ENST00000411896 C1orf167Q5SNV9 1468 aa20.17■□□□□ 0.82
GRAMD1A-202ENST00000411896 ZNF790Q6PG37 636 aa20.17■□□□□ 0.82
GRAMD1A-202ENST00000411896 SYT1P21579 422 aa20.17■□□□□ 0.82
GRAMD1A-202ENST00000411896 RIC3Q7Z5B4 369 aa20.17■□□□□ 0.82
GRAMD1A-202ENST00000411896 RNF214Q8ND24 703 aa20.17■□□□□ 0.82
GRAMD1A-202ENST00000411896 FAM227BQ96M60 508 aa20.17■□□□□ 0.82
GRAMD1A-202ENST00000411896 PDRG1Q9NUG6 133 aa20.17■□□□□ 0.82
GRAMD1A-202ENST00000411896 CNPY2Q9Y2B0 182 aa20.17■□□□□ 0.82
GRAMD1A-202ENST00000411896 CCDC171Q6TFL3 1326 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 DTNBO60941 627 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 MYL6BP14649 208 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 TMEM87AQ8NBN3 555 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 DDX54Q8TDD1 881 aaKnown RBP20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 SIL1Q9H173 461 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 SMC3Q9UQE7 1217 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 STX6O43752 255 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 NMIQ13287 307 aaPredicted RBP20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 PROSER2Q86WR7 435 aaPredicted RBP20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 KLHDC4Q8TBB5 520 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 TSPY26PQ9H489 355 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 ZSWIM6Q9HCJ5 1215 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 ADAMTSL3P82987 1691 aa20.16■□□□□ 0.82
GRAMD1A-202ENST00000411896 NECTIN1Q15223 517 aa20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 VPS53Q5VIR6 699 aa20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 CCDC83Q8IWF9 413 aa20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 SYAP1Q96A49 352 aaPredicted RBP20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 NPHP3Q7Z494 1330 aa20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 NEURL1BA8MQ27 555 aa20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 HS1BP3Q53T59 392 aa20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 XAGE3Q8WTP9 111 aa20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 RAPGEF4Q8WZA2 1011 aa20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 TM6SF1Q9BZW5 370 aa20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 RBM8AQ9Y5S9 174 aaKnown RBP20.15■□□□□ 0.82
GRAMD1A-202ENST00000411896 EPHA10Q5JZY3 1008 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms