RNA–Protein interactions for RNA: ENST00000406567.7

PREB-202, Transcript of prolactin regulatory element binding, humanhuman

TSL 5 BASIC

Gene PREB, Length 1,910 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-202ENST00000406567 ERC1Q8IUD2 1116 aa28.44■■■□□ 2.14
PREB-202ENST00000406567 ZGPATQ8N5A5 531 aaKnown RBP28.44■■■□□ 2.14
PREB-202ENST00000406567 SGSM2O43147 1006 aa28.43■■■□□ 2.14
PREB-202ENST00000406567 OS9Q13438 667 aaPredicted RBP28.43■■■□□ 2.14
PREB-202ENST00000406567 LARP1Q6PKG0 1096 aaKnown RBP28.43■■■□□ 2.14
PREB-202ENST00000406567 CNTROBQ8N137 903 aa28.43■■■□□ 2.14
PREB-202ENST00000406567 PA2G4Q9UQ80 394 aaKnown RBP28.43■■■□□ 2.14
PREB-202ENST00000406567 ABCA3Q99758 1704 aa28.43■■■□□ 2.14
PREB-202ENST00000406567 MCM2P49736 904 aa28.43■■■□□ 2.14
PREB-202ENST00000406567 HSPA2P54652 639 aa28.43■■■□□ 2.14
PREB-202ENST00000406567 SKOR2Q2VWA4 1001 aaPredicted RBP28.43■■■□□ 2.14
PREB-202ENST00000406567 STRCQ7RTU9 1775 aa28.43■■■□□ 2.14
PREB-202ENST00000406567 GOLGA6L3A6NEY3 463 aa28.42■■■□□ 2.14
PREB-202ENST00000406567 BRINP3Q76B58 766 aa28.42■■■□□ 2.14
PREB-202ENST00000406567 BICC1Q9H694 974 aaKnown RBP28.42■■■□□ 2.14
PREB-202ENST00000406567 GLRX3O76003 335 aaKnown RBP28.41■■■□□ 2.14
PREB-202ENST00000406567 HSPA4P34932 840 aa28.41■■■□□ 2.14
PREB-202ENST00000406567 CLASRPQ8N2M8 674 aaKnown RBP28.41■■■□□ 2.14
PREB-202ENST00000406567 XAGE3Q8WTP9 111 aa28.41■■■□□ 2.14
PREB-202ENST00000406567 DNAJC5Q9H3Z4 198 aa28.41■■■□□ 2.14
PREB-202ENST00000406567 RAD50Q92878 1312 aa28.41■■■□□ 2.14
PREB-202ENST00000406567 UBR2Q8IWV8 1755 aa28.41■■■□□ 2.14
PREB-202ENST00000406567 NEURL1BA8MQ27 555 aa28.41■■■□□ 2.14
PREB-202ENST00000406567 RIC3Q7Z5B4 369 aa28.41■■■□□ 2.14
PREB-202ENST00000406567 TMX3Q96JJ7 454 aa28.41■■■□□ 2.14
PREB-202ENST00000406567 SNRPA1P09661 255 aaKnown RBP28.4■■■□□ 2.14
PREB-202ENST00000406567 PKP1Q13835 747 aa28.4■■■□□ 2.14
PREB-202ENST00000406567 MYL6BP14649 208 aa28.39■■■□□ 2.14
PREB-202ENST00000406567 CUL4AQ13619 759 aa28.39■■■□□ 2.14
PREB-202ENST00000406567 METTL22Q9BUU2 404 aaPredicted RBP28.39■■■□□ 2.14
PREB-202ENST00000406567 COPS6Q7L5N1 327 aa28.39■■■□□ 2.13
PREB-202ENST00000406567 PAPPAQ13219 1627 aa28.38■■■□□ 2.13
PREB-202ENST00000406567 LSG1Q9H089 658 aaKnown RBP28.38■■■□□ 2.13
PREB-202ENST00000406567 ECHDC1Q9NTX5 307 aa28.38■■■□□ 2.13
PREB-202ENST00000406567 USP16Q9Y5T5 823 aa28.38■■■□□ 2.13
PREB-202ENST00000406567 SHANK3Q9BYB0 1731 aa28.38■■■□□ 2.13
PREB-202ENST00000406567 TTC5Q8N0Z6 440 aa28.37■■■□□ 2.13
PREB-202ENST00000406567 FMNL2Q96PY5 1086 aa28.37■■■□□ 2.13
PREB-202ENST00000406567 ZDHHC9Q9Y397 364 aa28.37■■■□□ 2.13
PREB-202ENST00000406567 XRCC6P12956 609 aaKnown RBP eCLIP28.37■■■□□ 2.13
PREB-202ENST00000406567 GCKRQ14397 625 aa28.37■■■□□ 2.13
PREB-202ENST00000406567 SASH1O94885 1247 aa28.36■■■□□ 2.13
PREB-202ENST00000406567 NEXNQ0ZGT2 675 aa28.36■■■□□ 2.13
PREB-202ENST00000406567 GOLGA6L22H0YM25 854 aa28.35■■■□□ 2.13
PREB-202ENST00000406567 WDR17Q8IZU2 1322 aa28.35■■■□□ 2.13
PREB-202ENST00000406567 MYD88Q99836 296 aa28.35■■■□□ 2.13
PREB-202ENST00000406567 ISY1Q9ULR0 285 aaKnown RBP28.35■■■□□ 2.13
PREB-202ENST00000406567 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.35■■■□□ 2.13
PREB-202ENST00000406567 COL5A2P05997 1499 aaPredicted RBP28.35■■■□□ 2.13
PREB-202ENST00000406567 GPATCH3Q96I76 525 aa28.34■■■□□ 2.13
PREB-202ENST00000406567 COL15A1P39059 1388 aa28.34■■■□□ 2.13
PREB-202ENST00000406567 SOS2Q07890 1332 aaPredicted RBP28.34■■■□□ 2.13
PREB-202ENST00000406567 IFIT2P09913 472 aaKnown RBP28.33■■■□□ 2.13
PREB-202ENST00000406567 NUP188Q5SRE5 1749 aa28.33■■■□□ 2.13
PREB-202ENST00000406567 CABP4P57796 275 aa28.33■■■□□ 2.13
PREB-202ENST00000406567 ANKRD13DQ6ZTN6 518 aa28.33■■■□□ 2.13
PREB-202ENST00000406567 EPHA10Q5JZY3 1008 aa28.32■■■□□ 2.12
PREB-202ENST00000406567 AACSQ86V21 672 aa28.32■■■□□ 2.12
PREB-202ENST00000406567 INTS4Q96HW7 963 aaKnown RBP28.32■■■□□ 2.12
PREB-202ENST00000406567 G3BP1Q13283 466 aaKnown RBP eCLIP28.31■■■□□ 2.12
PREB-202ENST00000406567 KLHL40Q2TBA0 621 aa28.31■■■□□ 2.12
PREB-202ENST00000406567 EAF2Q96CJ1 260 aaPredicted RBP28.31■■■□□ 2.12
PREB-202ENST00000406567 UPF3BQ9BZI7 483 aaKnown RBP28.31■■■□□ 2.12
PREB-202ENST00000406567 SNX14Q9Y5W7 946 aa28.31■■■□□ 2.12
PREB-202ENST00000406567 CWC27Q6UX04 472 aaKnown RBP28.3■■■□□ 2.12
PREB-202ENST00000406567 KCPQ6ZWJ8 1503 aa28.3■■■□□ 2.12
PREB-202ENST00000406567 MRE11P49959 708 aa28.3■■■□□ 2.12
PREB-202ENST00000406567 PCDH11XQ9BZA7 1347 aa28.29■■■□□ 2.12
PREB-202ENST00000406567 PCDH11YQ9BZA8 1340 aa28.29■■■□□ 2.12
PREB-202ENST00000406567 PIP4K2AP48426 406 aaPredicted RBP28.29■■■□□ 2.12
PREB-202ENST00000406567 MCTP1Q6DN14 999 aa28.28■■■□□ 2.12
PREB-202ENST00000406567 EVI5LQ96CN4 794 aa28.28■■■□□ 2.12
PREB-202ENST00000406567 PRDM11Q9NQV5 511 aa28.28■■■□□ 2.12
PREB-202ENST00000406567 LMBRD1Q9NUN5 540 aa28.28■■■□□ 2.12
PREB-202ENST00000406567 DIAPH3Q9NSV4 1193 aa28.28■■■□□ 2.12
PREB-202ENST00000406567 ERBB4Q15303 1308 aa28.27■■■□□ 2.12
PREB-202ENST00000406567 TJP1Q07157 1748 aa28.27■■■□□ 2.12
PREB-202ENST00000406567 TTC14Q96N46 770 aa28.27■■■□□ 2.12
PREB-202ENST00000406567 RABL6Q3YEC7 729 aaPredicted RBP28.26■■■□□ 2.11
PREB-202ENST00000406567 RASEFQ8IZ41 740 aa28.26■■■□□ 2.11
PREB-202ENST00000406567 RUFY2Q8WXA3 655 aa28.26■■■□□ 2.11
PREB-202ENST00000406567 ARXQ96QS3 562 aa28.26■■■□□ 2.11
PREB-202ENST00000406567 RFX5P48382 616 aaPredicted RBP28.26■■■□□ 2.11
PREB-202ENST00000406567 ZCRB1Q8TBF4 217 aaKnown RBP28.26■■■□□ 2.11
PREB-202ENST00000406567 GRPEL1Q9HAV7 217 aa28.26■■■□□ 2.11
PREB-202ENST00000406567 COPRSQ9NQ92 184 aa28.26■■■□□ 2.11
PREB-202ENST00000406567 TLR7Q9NYK1 1049 aaKnown RBP28.26■■■□□ 2.11
PREB-202ENST00000406567 NHSL1Q5SYE7 1610 aa28.26■■■□□ 2.11
PREB-202ENST00000406567 BRD1O95696 1058 aa28.25■■■□□ 2.11
PREB-202ENST00000406567 KIAA1211Q6ZU35 1233 aa28.25■■■□□ 2.11
PREB-202ENST00000406567 GAS2L3Q86XJ1 694 aa28.25■■■□□ 2.11
PREB-202ENST00000406567 KLHDC4Q8TBB5 520 aa28.25■■■□□ 2.11
PREB-202ENST00000406567 PANK2Q9BZ23 570 aa28.25■■■□□ 2.11
PREB-202ENST00000406567 RTN4Q9NQC3 1192 aaKnown RBP28.25■■■□□ 2.11
PREB-202ENST00000406567 NKX1-1Q15270 411 aaPredicted RBP28.24■■■□□ 2.11
PREB-202ENST00000406567 SIL1Q9H173 461 aa28.24■■■□□ 2.11
PREB-202ENST00000406567 TOGARAM1Q9Y4F4 1720 aa28.24■■■□□ 2.11
PREB-202ENST00000406567 CASP7P55210 303 aa28.24■■■□□ 2.11
PREB-202ENST00000406567 TOM1L2Q6ZVM7 507 aa28.24■■■□□ 2.11
PREB-202ENST00000406567 PLBD2Q8NHP8 589 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms