RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 NPHP1O15259 732 aa26.91■■□□□ 1.9
PDGFA-204ENST00000405692 PELP1Q8IZL8 1130 aaKnown RBP26.91■■□□□ 1.9
PDGFA-204ENST00000405692 TTLL7Q6ZT98 887 aa26.9■■□□□ 1.9
PDGFA-204ENST00000405692 TSR2Q969E8 191 aaKnown RBP26.9■■□□□ 1.9
PDGFA-204ENST00000405692 CHPF2Q9P2E5 772 aa26.9■■□□□ 1.9
PDGFA-204ENST00000405692 KIF13BQ9NQT8 1826 aa26.9■■□□□ 1.9
PDGFA-204ENST00000405692 ELL2O00472 640 aaPredicted RBP26.89■■□□□ 1.9
PDGFA-204ENST00000405692 LRP10Q7Z4F1 713 aa26.89■■□□□ 1.9
PDGFA-204ENST00000405692 MIER1Q8N108 512 aa26.89■■□□□ 1.9
PDGFA-204ENST00000405692 C8orf58Q8NAV2 365 aa26.89■■□□□ 1.9
PDGFA-204ENST00000405692 MYH16Q9H6N6 1097 aa26.89■■□□□ 1.9
PDGFA-204ENST00000405692 HYPKQ9NX55 129 aa26.89■■□□□ 1.9
PDGFA-204ENST00000405692 NIP7Q9Y221 180 aaKnown RBP eCLIP26.89■■□□□ 1.9
PDGFA-204ENST00000405692 HLFQ16534 295 aa26.88■■□□□ 1.89
PDGFA-204ENST00000405692 PROSER3Q2NL68 480 aa26.88■■□□□ 1.89
PDGFA-204ENST00000405692 GRIN3BO60391 1043 aa26.87■■□□□ 1.89
PDGFA-204ENST00000405692 ANXA1P04083 346 aa26.87■■□□□ 1.89
PDGFA-204ENST00000405692 GOLGA2Q08379 1002 aa26.87■■□□□ 1.89
PDGFA-204ENST00000405692 CCDC30Q5VVM6 783 aa26.87■■□□□ 1.89
PDGFA-204ENST00000405692 COPS6Q7L5N1 327 aa26.87■■□□□ 1.89
PDGFA-204ENST00000405692 CNBD1Q8NA66 436 aa26.87■■□□□ 1.89
PDGFA-204ENST00000405692 ZBTB3Q9H5J0 574 aa26.87■■□□□ 1.89
PDGFA-204ENST00000405692 NRXN2Q9P2S2 1712 aa26.87■■□□□ 1.89
PDGFA-204ENST00000405692 PXDNLA1KZ92 1463 aa26.87■■□□□ 1.89
PDGFA-204ENST00000405692 ST5P78524 1137 aa26.86■■□□□ 1.89
PDGFA-204ENST00000405692 AIMP1Q12904 312 aaKnown RBP26.86■■□□□ 1.89
PDGFA-204ENST00000405692 GIGYF2Q6Y7W6 1299 aaKnown RBP26.86■■□□□ 1.89
PDGFA-204ENST00000405692 NBPF5PQ86XG9 351 aaPredicted RBP26.86■■□□□ 1.89
PDGFA-204ENST00000405692 XAGE3Q8WTP9 111 aa26.86■■□□□ 1.89
PDGFA-204ENST00000405692 PDZRN3Q9UPQ7 1066 aa26.86■■□□□ 1.89
PDGFA-204ENST00000405692 A0A0G2JLW4 131 aa26.85■■□□□ 1.89
PDGFA-204ENST00000405692 TPTE2Q6XPS3 522 aa26.85■■□□□ 1.89
PDGFA-204ENST00000405692 FANCIQ9NVI1 1328 aa26.85■■□□□ 1.89
PDGFA-204ENST00000405692 DPEP1P16444 411 aa26.84■■□□□ 1.89
PDGFA-204ENST00000405692 TWISTNBQ3B726 338 aaPredicted RBP26.84■■□□□ 1.89
PDGFA-204ENST00000405692 HSP90AB3PQ58FF7 597 aa26.84■■□□□ 1.89
PDGFA-204ENST00000405692 PRR5LQ6MZQ0 368 aa26.84■■□□□ 1.89
PDGFA-204ENST00000405692 AFDNP55196 1824 aaKnown RBP26.83■■□□□ 1.89
PDGFA-204ENST00000405692 ATP10DQ9P241 1426 aa26.83■■□□□ 1.89
PDGFA-204ENST00000405692 PDE6BP35913 854 aa26.83■■□□□ 1.89
PDGFA-204ENST00000405692 BRIP1Q9BX63 1249 aa26.83■■□□□ 1.89
PDGFA-204ENST00000405692 NYXQ9GZU5 481 aa26.83■■□□□ 1.89
PDGFA-204ENST00000405692 TSPYL6Q8N831 410 aa26.82■■□□□ 1.88
PDGFA-204ENST00000405692 STK31Q9BXU1 1019 aa26.82■■□□□ 1.88
PDGFA-204ENST00000405692 PIM2Q9P1W9 311 aa26.82■■□□□ 1.88
PDGFA-204ENST00000405692 GTF2E1P29083 439 aaPredicted RBP26.81■■□□□ 1.88
PDGFA-204ENST00000405692 ZNF521Q96K83 1311 aa26.81■■□□□ 1.88
PDGFA-204ENST00000405692 H0YIN7 160 aa26.8■■□□□ 1.88
PDGFA-204ENST00000405692 YBX3P16989 372 aaKnown RBP eCLIP26.8■■□□□ 1.88
PDGFA-204ENST00000405692 PARP10Q53GL7 1025 aa26.8■■□□□ 1.88
PDGFA-204ENST00000405692 PLBD2Q8NHP8 589 aa26.8■■□□□ 1.88
PDGFA-204ENST00000405692 ANKRD13DQ6ZTN6 518 aa26.79■■□□□ 1.88
PDGFA-204ENST00000405692 ZNF34Q8IZ26 560 aa26.79■■□□□ 1.88
PDGFA-204ENST00000405692 PPP1R42Q7Z4L9 355 aa26.78■■□□□ 1.88
PDGFA-204ENST00000405692 NUP98P52948 1817 aa26.77■■□□□ 1.88
PDGFA-204ENST00000405692 N4BP2Q86UW6 1770 aaPredicted RBP26.77■■□□□ 1.88
PDGFA-204ENST00000405692 KIAA1551Q9HCM1 1747 aa26.77■■□□□ 1.88
PDGFA-204ENST00000405692 IBTKQ9P2D0 1353 aaPredicted RBP26.77■■□□□ 1.88
PDGFA-204ENST00000405692 FAM177BA6PVY3 158 aa26.77■■□□□ 1.88
PDGFA-204ENST00000405692 KCNA3P22001 575 aa26.77■■□□□ 1.88
PDGFA-204ENST00000405692 GPTP24298 496 aa26.77■■□□□ 1.88
PDGFA-204ENST00000405692 CHRNA5P30532 468 aa26.77■■□□□ 1.88
PDGFA-204ENST00000405692 C2CD5Q86YS7 1000 aa26.77■■□□□ 1.88
PDGFA-204ENST00000405692 SPINK5Q9NQ38 1064 aaPredicted RBP26.77■■□□□ 1.88
PDGFA-204ENST00000405692 BCS1LQ9Y276 419 aa26.77■■□□□ 1.88
PDGFA-204ENST00000405692 E9PSI1 815 aa26.76■■□□□ 1.87
PDGFA-204ENST00000405692 DDX58O95786 925 aaKnown RBP26.76■■□□□ 1.87
PDGFA-204ENST00000405692 EXOSC9Q06265 439 aaKnown RBP26.76■■□□□ 1.87
PDGFA-204ENST00000405692 DALRD3Q5D0E6 543 aaKnown RBP26.76■■□□□ 1.87
PDGFA-204ENST00000405692 WWC3Q9ULE0 1092 aa26.76■■□□□ 1.87
PDGFA-204ENST00000405692 TCIRG1Q13488 830 aa26.75■■□□□ 1.87
PDGFA-204ENST00000405692 RIC3Q7Z5B4 369 aa26.74■■□□□ 1.87
PDGFA-204ENST00000405692 CCDC24Q8N4L8 307 aa26.74■■□□□ 1.87
PDGFA-204ENST00000405692 UBN2Q6ZU65 1347 aa26.73■■□□□ 1.87
PDGFA-204ENST00000405692 VAMP4O75379 141 aa26.73■■□□□ 1.87
PDGFA-204ENST00000405692 PHAXQ9H814 394 aaKnown RBP26.73■■□□□ 1.87
PDGFA-204ENST00000405692 RNF123Q5XPI4 1314 aa26.72■■□□□ 1.87
PDGFA-204ENST00000405692 SUSD4Q5VX71 490 aa26.72■■□□□ 1.87
PDGFA-204ENST00000405692 TTLL6Q8N841 843 aa26.71■■□□□ 1.87
PDGFA-204ENST00000405692 UTP14AQ9BVJ6 771 aaKnown RBP26.71■■□□□ 1.87
PDGFA-204ENST00000405692 SLC4A2P04920 1241 aa26.7■■□□□ 1.86
PDGFA-204ENST00000405692 ZNF622Q969S3 477 aaKnown RBP eCLIP26.7■■□□□ 1.86
PDGFA-204ENST00000405692 NTSR2O95665 410 aa26.69■■□□□ 1.86
PDGFA-204ENST00000405692 YY1P25490 414 aa26.69■■□□□ 1.86
PDGFA-204ENST00000405692 STYK1Q6J9G0 422 aa26.69■■□□□ 1.86
PDGFA-204ENST00000405692 NLRP10Q86W26 655 aa26.69■■□□□ 1.86
PDGFA-204ENST00000405692 MASTLQ96GX5 879 aa26.69■■□□□ 1.86
PDGFA-204ENST00000405692 KLRG2A4D1S0 409 aaPredicted RBP26.68■■□□□ 1.86
PDGFA-204ENST00000405692 SLFN5Q08AF3 891 aa26.68■■□□□ 1.86
PDGFA-204ENST00000405692 NUTM1Q86Y26 1132 aa26.68■■□□□ 1.86
PDGFA-204ENST00000405692 CNKSR1Q969H4 720 aa26.68■■□□□ 1.86
PDGFA-204ENST00000405692 TCERG1O14776 1098 aaKnown RBP26.67■■□□□ 1.86
PDGFA-204ENST00000405692 SRGNP10124 158 aa26.67■■□□□ 1.86
PDGFA-204ENST00000405692 ERFEQ4G0M1 354 aa26.67■■□□□ 1.86
PDGFA-204ENST00000405692 BRCA1P38398 1863 aaKnown RBP26.67■■□□□ 1.86
PDGFA-204ENST00000405692 ANKRD31Q8N7Z5 1873 aa26.67■■□□□ 1.86
PDGFA-204ENST00000405692 NPR1P16066 1061 aa26.66■■□□□ 1.86
PDGFA-204ENST00000405692 TRIM28Q13263 835 aaKnown RBP26.66■■□□□ 1.86
PDGFA-204ENST00000405692 ISCA1Q9BUE6 129 aa26.66■■□□□ 1.86
PDGFA-204ENST00000405692 TRMT112Q9UI30 125 aaKnown RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms