RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 BTBD11A6QL63 1104 aa14.4□□□□□ -0.1
RBM39-206ENST00000403542 STK3Q13188 491 aa14.4□□□□□ -0.1
RBM39-206ENST00000403542 FAM227BQ96M60 508 aa14.4□□□□□ -0.1
RBM39-206ENST00000403542 EIF4A1P60842 406 aaKnown RBP14.39□□□□□ -0.11
RBM39-206ENST00000403542 HS1BP3Q53T59 392 aa14.39□□□□□ -0.11
RBM39-206ENST00000403542 BEND3Q5T5X7 828 aa14.39□□□□□ -0.11
RBM39-206ENST00000403542 MAP3K2Q9Y2U5 619 aa14.39□□□□□ -0.11
RBM39-206ENST00000403542 NDUFB9Q9Y6M9 179 aa14.39□□□□□ -0.11
RBM39-206ENST00000403542 IFIT2P09913 472 aaKnown RBP14.39□□□□□ -0.11
RBM39-206ENST00000403542 AACSQ86V21 672 aa14.39□□□□□ -0.11
RBM39-206ENST00000403542 BCL11BQ9C0K0 894 aaPredicted RBP14.39□□□□□ -0.11
RBM39-206ENST00000403542 PIP4K2AP48426 406 aaPredicted RBP14.38□□□□□ -0.11
RBM39-206ENST00000403542 ZNF530Q6P9A1 599 aaPredicted RBP14.38□□□□□ -0.11
RBM39-206ENST00000403542 CLASRPQ8N2M8 674 aaKnown RBP14.38□□□□□ -0.11
RBM39-206ENST00000403542 TTC14Q96N46 770 aa14.38□□□□□ -0.11
RBM39-206ENST00000403542 PDRG1Q9NUG6 133 aa14.38□□□□□ -0.11
RBM39-206ENST00000403542 TAF6LQ9Y6J9 622 aa14.38□□□□□ -0.11
RBM39-206ENST00000403542 PPFIA3O75145 1194 aa14.38□□□□□ -0.11
RBM39-206ENST00000403542 F13A1P00488 732 aa14.38□□□□□ -0.11
RBM39-206ENST00000403542 EDC3Q96F86 508 aaKnown RBP14.38□□□□□ -0.11
RBM39-206ENST00000403542 PDCL3Q9H2J4 239 aa14.38□□□□□ -0.11
RBM39-206ENST00000403542 SSH2Q76I76 1423 aa14.38□□□□□ -0.11
RBM39-206ENST00000403542 RAB11FIP3O75154 756 aa14.37□□□□□ -0.11
RBM39-206ENST00000403542 PHF14O94880 888 aa14.37□□□□□ -0.11
RBM39-206ENST00000403542 KIAA2012Q0VF49 1180 aa14.37□□□□□ -0.11
RBM39-206ENST00000403542 POLA2Q14181 598 aa14.37□□□□□ -0.11
RBM39-206ENST00000403542 BOLA2Q9H3K6 86 aa14.37□□□□□ -0.11
RBM39-206ENST00000403542 TLR7Q9NYK1 1049 aaKnown RBP14.37□□□□□ -0.11
RBM39-206ENST00000403542 CCDC183Q5T5S1 534 aa14.37□□□□□ -0.11
RBM39-206ENST00000403542 HYPKQ9NX55 129 aa14.37□□□□□ -0.11
RBM39-206ENST00000403542 CHGBP05060 677 aa14.36□□□□□ -0.11
RBM39-206ENST00000403542 AGLP35573 1532 aa14.36□□□□□ -0.11
RBM39-206ENST00000403542 HTATSF1O43719 755 aaKnown RBP14.36□□□□□ -0.11
RBM39-206ENST00000403542 ME3Q16798 604 aa14.36□□□□□ -0.11
RBM39-206ENST00000403542 TFIP11Q9UBB9 837 aaKnown RBP14.36□□□□□ -0.11
RBM39-206ENST00000403542 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.36□□□□□ -0.11
RBM39-206ENST00000403542 DIP2BQ9P265 1576 aa14.36□□□□□ -0.11
RBM39-206ENST00000403542 FOSBP53539 338 aa14.36□□□□□ -0.11
RBM39-206ENST00000403542 RGPD1P0DJD0 1748 aa14.35□□□□□ -0.11
RBM39-206ENST00000403542 RGPD8O14715 1765 aaPredicted RBP14.35□□□□□ -0.11
RBM39-206ENST00000403542 AP5Z1O43299 807 aa14.35□□□□□ -0.11
RBM39-206ENST00000403542 GLRX3O76003 335 aaKnown RBP14.35□□□□□ -0.11
RBM39-206ENST00000403542 MYL6BP14649 208 aa14.35□□□□□ -0.11
RBM39-206ENST00000403542 CKAP2LQ8IYA6 745 aa14.35□□□□□ -0.11
RBM39-206ENST00000403542 CYP46A1Q9Y6A2 500 aa14.35□□□□□ -0.11
RBM39-206ENST00000403542 UBE2HP62256 183 aa14.34□□□□□ -0.11
RBM39-206ENST00000403542 ESCO1Q5FWF5 840 aa14.34□□□□□ -0.11
RBM39-206ENST00000403542 ECHDC1Q9NTX5 307 aa14.34□□□□□ -0.11
RBM39-206ENST00000403542 TPCN1Q9ULQ1 816 aa14.34□□□□□ -0.11
RBM39-206ENST00000403542 RBM8AQ9Y5S9 174 aaKnown RBP14.34□□□□□ -0.11
RBM39-206ENST00000403542 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
RBM39-206ENST00000403542 ST3GAL1Q11201 340 aa14.34□□□□□ -0.11
RBM39-206ENST00000403542 SLC39A6Q13433 755 aa14.34□□□□□ -0.11
RBM39-206ENST00000403542 CSPP1Q1MSJ5 1256 aa14.34□□□□□ -0.11
RBM39-206ENST00000403542 PRDM10Q9NQV6 1147 aa14.34□□□□□ -0.11
RBM39-206ENST00000403542 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
RBM39-206ENST00000403542 PSME1Q06323 249 aa14.33□□□□□ -0.11
RBM39-206ENST00000403542 NMIQ13287 307 aaPredicted RBP14.33□□□□□ -0.11
RBM39-206ENST00000403542 LARP1BQ659C4 914 aaKnown RBP14.33□□□□□ -0.11
RBM39-206ENST00000403542 CDC37L1Q7L3B6 337 aa14.33□□□□□ -0.11
RBM39-206ENST00000403542 ADCY9O60503 1353 aa14.33□□□□□ -0.12
RBM39-206ENST00000403542 EAF2Q96CJ1 260 aaPredicted RBP14.33□□□□□ -0.12
RBM39-206ENST00000403542 PKNOX2Q96KN3 472 aa14.33□□□□□ -0.12
RBM39-206ENST00000403542 BICC1Q9H694 974 aaKnown RBP14.32□□□□□ -0.12
RBM39-206ENST00000403542 A0A0D9SFI3 127 aa14.32□□□□□ -0.12
RBM39-206ENST00000403542 CEBPZQ03701 1054 aaKnown RBP14.32□□□□□ -0.12
RBM39-206ENST00000403542 NOLC1Q14978 699 aaKnown RBP eCLIP14.32□□□□□ -0.12
RBM39-206ENST00000403542 SASS6Q6UVJ0 657 aa14.32□□□□□ -0.12
RBM39-206ENST00000403542 DDX11Q96FC9 970 aa14.32□□□□□ -0.12
RBM39-206ENST00000403542 SUCLG2Q96I99 432 aa14.32□□□□□ -0.12
RBM39-206ENST00000403542 FSD1Q9BTV5 496 aa14.32□□□□□ -0.12
RBM39-206ENST00000403542 AOX1Q06278 1338 aa14.32□□□□□ -0.12
RBM39-206ENST00000403542 ZKSCAN1P17029 563 aaPredicted RBP14.32□□□□□ -0.12
RBM39-206ENST00000403542 CREB3L3Q68CJ9 461 aa14.32□□□□□ -0.12
RBM39-206ENST00000403542 LIG1P18858 919 aa14.31□□□□□ -0.12
RBM39-206ENST00000403542 RUFY2Q8WXA3 655 aa14.31□□□□□ -0.12
RBM39-206ENST00000403542 LRRC2Q9BYS8 371 aa14.31□□□□□ -0.12
RBM39-206ENST00000403542 PHF8Q9UPP1 1060 aa14.31□□□□□ -0.12
RBM39-206ENST00000403542 TAOK2Q9UL54 1235 aa14.31□□□□□ -0.12
RBM39-206ENST00000403542 XRN1Q8IZH2 1706 aaKnown RBP14.3□□□□□ -0.12
RBM39-206ENST00000403542 KDM4AO75164 1064 aa14.3□□□□□ -0.12
RBM39-206ENST00000403542 SASH1O94885 1247 aa14.3□□□□□ -0.12
RBM39-206ENST00000403542 C1orf141Q5JVX7 400 aa14.3□□□□□ -0.12
RBM39-206ENST00000403542 TTC6Q86TZ1 520 aa14.3□□□□□ -0.12
RBM39-206ENST00000403542 LUZP1Q86V48 1076 aa14.3□□□□□ -0.12
RBM39-206ENST00000403542 DBF4Q9UBU7 674 aaPredicted RBP14.3□□□□□ -0.12
RBM39-206ENST00000403542 CCDC171Q6TFL3 1326 aa14.3□□□□□ -0.12
RBM39-206ENST00000403542 MCM5P33992 734 aa14.3□□□□□ -0.12
RBM39-206ENST00000403542 G3BP1Q13283 466 aaKnown RBP eCLIP14.3□□□□□ -0.12
RBM39-206ENST00000403542 HSP90AB4PQ58FF6 505 aa14.3□□□□□ -0.12
RBM39-206ENST00000403542 ZNF589Q86UQ0 364 aaPredicted RBP14.3□□□□□ -0.12
RBM39-206ENST00000403542 TBX22Q9Y458 520 aa14.3□□□□□ -0.12
RBM39-206ENST00000403542 GPATCH3Q96I76 525 aa14.29□□□□□ -0.12
RBM39-206ENST00000403542 PYCARDQ9ULZ3 195 aa14.29□□□□□ -0.12
RBM39-206ENST00000403542 ATP6V1DQ9Y5K8 247 aa14.29□□□□□ -0.12
RBM39-206ENST00000403542 PIK3C2AO00443 1686 aa14.29□□□□□ -0.12
RBM39-206ENST00000403542 SLFNL1Q499Z3 407 aa14.29□□□□□ -0.12
RBM39-206ENST00000403542 CCDC129Q6ZRS4 1044 aa14.29□□□□□ -0.12
RBM39-206ENST00000403542 IP6K1Q92551 441 aa14.29□□□□□ -0.12
RBM39-206ENST00000403542 FAM208AQ9UK61 1670 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms