RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 SLAIN2Q9P270 581 aa21.79■■□□□ 1.08
CHTOP-205ENST00000403433 PCDH11XQ9BZA7 1347 aa21.79■■□□□ 1.08
CHTOP-205ENST00000403433 PCDH11YQ9BZA8 1340 aa21.79■■□□□ 1.08
CHTOP-205ENST00000403433 AFDNP55196 1824 aaKnown RBP21.79■■□□□ 1.08
CHTOP-205ENST00000403433 COL5A2P05997 1499 aaPredicted RBP21.78■■□□□ 1.08
CHTOP-205ENST00000403433 EPB41L2O43491 1005 aaKnown RBP21.78■■□□□ 1.08
CHTOP-205ENST00000403433 MAP4K4O95819 1239 aaPredicted RBP21.78■■□□□ 1.08
CHTOP-205ENST00000403433 TOM1L2Q6ZVM7 507 aa21.78■■□□□ 1.08
CHTOP-205ENST00000403433 BICC1Q9H694 974 aaKnown RBP21.78■■□□□ 1.08
CHTOP-205ENST00000403433 GLI3P10071 1580 aa21.78■■□□□ 1.08
CHTOP-205ENST00000403433 NEURL1BA8MQ27 555 aa21.78■■□□□ 1.08
CHTOP-205ENST00000403433 GLRX3O76003 335 aaKnown RBP21.78■■□□□ 1.08
CHTOP-205ENST00000403433 METTL22Q9BUU2 404 aaPredicted RBP21.78■■□□□ 1.08
CHTOP-205ENST00000403433 ARFGEF2Q9Y6D5 1785 aa21.78■■□□□ 1.08
CHTOP-205ENST00000403433 PTMSP20962 102 aa21.77■■□□□ 1.08
CHTOP-205ENST00000403433 MYD88Q99836 296 aa21.77■■□□□ 1.08
CHTOP-205ENST00000403433 PA2G4Q9UQ80 394 aaKnown RBP21.77■■□□□ 1.08
CHTOP-205ENST00000403433 USP16Q9Y5T5 823 aa21.77■■□□□ 1.08
CHTOP-205ENST00000403433 ZNF335Q9H4Z2 1342 aaPredicted RBP21.77■■□□□ 1.07
CHTOP-205ENST00000403433 IFIT2P09913 472 aaKnown RBP21.76■■□□□ 1.07
CHTOP-205ENST00000403433 MCM2P49736 904 aa21.76■■□□□ 1.07
CHTOP-205ENST00000403433 GCKRQ14397 625 aa21.76■■□□□ 1.07
CHTOP-205ENST00000403433 ANKRD13DQ6ZTN6 518 aa21.76■■□□□ 1.07
CHTOP-205ENST00000403433 KAZALD1Q96I82 304 aa21.76■■□□□ 1.07
CHTOP-205ENST00000403433 CWC22Q9HCG8 908 aaKnown RBP21.76■■□□□ 1.07
CHTOP-205ENST00000403433 NEK4P51957 841 aa21.75■■□□□ 1.07
CHTOP-205ENST00000403433 ZCRB1Q8TBF4 217 aaKnown RBP21.75■■□□□ 1.07
CHTOP-205ENST00000403433 SSFA2P28290 1259 aa21.74■■□□□ 1.07
CHTOP-205ENST00000403433 NUCB2P80303 420 aa21.74■■□□□ 1.07
CHTOP-205ENST00000403433 G3BP1Q13283 466 aaKnown RBP eCLIP21.74■■□□□ 1.07
CHTOP-205ENST00000403433 LRP10Q7Z4F1 713 aa21.74■■□□□ 1.07
CHTOP-205ENST00000403433 ECHDC1Q9NTX5 307 aa21.74■■□□□ 1.07
CHTOP-205ENST00000403433 PALD1Q9ULE6 856 aa21.74■■□□□ 1.07
CHTOP-205ENST00000403433 UBR2Q8IWV8 1755 aa21.74■■□□□ 1.07
CHTOP-205ENST00000403433 AACSQ86V21 672 aa21.73■■□□□ 1.07
CHTOP-205ENST00000403433 SGSM2O43147 1006 aa21.72■■□□□ 1.07
CHTOP-205ENST00000403433 L1TD1Q5T7N2 865 aaKnown RBP21.72■■□□□ 1.07
CHTOP-205ENST00000403433 IL17RAQ96F46 866 aa21.72■■□□□ 1.07
CHTOP-205ENST00000403433 PAPPAQ13219 1627 aa21.72■■□□□ 1.07
CHTOP-205ENST00000403433 PIP4K2AP48426 406 aaPredicted RBP21.72■■□□□ 1.07
CHTOP-205ENST00000403433 GZF1Q9H116 711 aaPredicted RBP21.72■■□□□ 1.07
CHTOP-205ENST00000403433 NHSL1Q5SYE7 1610 aa21.72■■□□□ 1.07
CHTOP-205ENST00000403433 SHANK3Q9BYB0 1731 aa21.72■■□□□ 1.07
CHTOP-205ENST00000403433 GOLGA6L22H0YM25 854 aa21.71■■□□□ 1.07
CHTOP-205ENST00000403433 IL25Q9H293 177 aa21.71■■□□□ 1.07
CHTOP-205ENST00000403433 ERBB4Q15303 1308 aa21.71■■□□□ 1.07
CHTOP-205ENST00000403433 RAD50Q92878 1312 aa21.71■■□□□ 1.07
CHTOP-205ENST00000403433 ERVV-2B6SEH9 535 aa21.7■■□□□ 1.07
CHTOP-205ENST00000403433 IL2RBP14784 551 aa21.7■■□□□ 1.07
CHTOP-205ENST00000403433 HSPA4P34932 840 aa21.7■■□□□ 1.07
CHTOP-205ENST00000403433 CLEC17AQ6ZS10 378 aa21.7■■□□□ 1.07
CHTOP-205ENST00000403433 CARD10Q9BWT7 1032 aa21.7■■□□□ 1.07
CHTOP-205ENST00000403433 DIAPH3Q9NSV4 1193 aa21.7■■□□□ 1.07
CHTOP-205ENST00000403433 SKOR2Q2VWA4 1001 aaPredicted RBP21.7■■□□□ 1.06
CHTOP-205ENST00000403433 KIAA1211Q6ZU35 1233 aa21.7■■□□□ 1.06
CHTOP-205ENST00000403433 SASH1O94885 1247 aa21.69■■□□□ 1.06
CHTOP-205ENST00000403433 IL27Q8NEV9 243 aa21.69■■□□□ 1.06
CHTOP-205ENST00000403433 RUFY2Q8WXA3 655 aa21.69■■□□□ 1.06
CHTOP-205ENST00000403433 ZGPATQ8N5A5 531 aaKnown RBP21.68■■□□□ 1.06
CHTOP-205ENST00000403433 PLBD2Q8NHP8 589 aa21.68■■□□□ 1.06
CHTOP-205ENST00000403433 KDM4FA0A1W2PPD8 638 aa21.68■■□□□ 1.06
CHTOP-205ENST00000403433 CWC27Q6UX04 472 aaKnown RBP21.68■■□□□ 1.06
CHTOP-205ENST00000403433 TMX3Q96JJ7 454 aa21.68■■□□□ 1.06
CHTOP-205ENST00000403433 SIL1Q9H173 461 aa21.68■■□□□ 1.06
CHTOP-205ENST00000403433 KCPQ6ZWJ8 1503 aa21.67■■□□□ 1.06
CHTOP-205ENST00000403433 COL15A1P39059 1388 aa21.67■■□□□ 1.06
CHTOP-205ENST00000403433 NKX1-1Q15270 411 aaPredicted RBP21.67■■□□□ 1.06
CHTOP-205ENST00000403433 EVI5LQ96CN4 794 aa21.67■■□□□ 1.06
CHTOP-205ENST00000403433 STRN4Q9NRL3 753 aa21.67■■□□□ 1.06
CHTOP-205ENST00000403433 BRPF3Q9ULD4 1205 aa21.67■■□□□ 1.06
CHTOP-205ENST00000403433 GOLGA6L3A6NEY3 463 aa21.67■■□□□ 1.06
CHTOP-205ENST00000403433 BAG4O95429 457 aaKnown RBP21.67■■□□□ 1.06
CHTOP-205ENST00000403433 CYP2E1P05181 493 aaPredicted RBP21.67■■□□□ 1.06
CHTOP-205ENST00000403433 EVA1CP58658 441 aa21.67■■□□□ 1.06
CHTOP-205ENST00000403433 EPHA10Q5JZY3 1008 aa21.67■■□□□ 1.06
CHTOP-205ENST00000403433 LSG1Q9H089 658 aaKnown RBP21.67■■□□□ 1.06
CHTOP-205ENST00000403433 NUP188Q5SRE5 1749 aa21.66■■□□□ 1.06
CHTOP-205ENST00000403433 UBE3BQ7Z3V4 1068 aa21.66■■□□□ 1.06
CHTOP-205ENST00000403433 EAF2Q96CJ1 260 aaPredicted RBP21.66■■□□□ 1.06
CHTOP-205ENST00000403433 DDX54Q8TDD1 881 aaKnown RBP21.65■■□□□ 1.06
CHTOP-205ENST00000403433 ATP5J2-PTCD1G3V325 749 aa21.64■■□□□ 1.05
CHTOP-205ENST00000403433 PTCD1O75127 700 aaKnown RBP21.64■■□□□ 1.05
CHTOP-205ENST00000403433 KLHDC4Q8TBB5 520 aa21.64■■□□□ 1.05
CHTOP-205ENST00000403433 UPF3BQ9BZI7 483 aaKnown RBP21.64■■□□□ 1.05
CHTOP-205ENST00000403433 CCDC8Q9H0W5 538 aaPredicted RBP21.64■■□□□ 1.05
CHTOP-205ENST00000403433 A0A087WZG4 1122 aa21.63■■□□□ 1.05
CHTOP-205ENST00000403433 CUL4AQ13619 759 aa21.63■■□□□ 1.05
CHTOP-205ENST00000403433 COPRSQ9NQ92 184 aa21.63■■□□□ 1.05
CHTOP-205ENST00000403433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.63■■□□□ 1.05
CHTOP-205ENST00000403433 FSD2A1L4K1 749 aa21.63■■□□□ 1.05
CHTOP-205ENST00000403433 NBPF26B4DH59 902 aa21.63■■□□□ 1.05
CHTOP-205ENST00000403433 HIP1O00291 1037 aa21.63■■□□□ 1.05
CHTOP-205ENST00000403433 PKP1Q13835 747 aa21.63■■□□□ 1.05
CHTOP-205ENST00000403433 RABL6Q3YEC7 729 aaPredicted RBP21.63■■□□□ 1.05
CHTOP-205ENST00000403433 NBPF14Q5TI25 921 aa21.63■■□□□ 1.05
CHTOP-205ENST00000403433 NBPF10Q6P3W6 841 aaKnown RBP21.63■■□□□ 1.05
CHTOP-205ENST00000403433 NBPF15Q8N660 670 aa21.63■■□□□ 1.05
CHTOP-205ENST00000403433 JARID2Q92833 1246 aaPredicted RBP21.63■■□□□ 1.05
CHTOP-205ENST00000403433 TNS2Q63HR2 1409 aa21.62■■□□□ 1.05
CHTOP-205ENST00000403433 NOL8Q76FK4 1167 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms