RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 FAM227BQ96M60 508 aa12.71□□□□□ -0.38
PPP4R1-203ENST00000400556 NDUFB9Q9Y6M9 179 aa12.71□□□□□ -0.38
PPP4R1-203ENST00000400556 TTC21AQ8NDW8 1320 aa12.71□□□□□ -0.38
PPP4R1-203ENST00000400556 STK3Q13188 491 aa12.7□□□□□ -0.38
PPP4R1-203ENST00000400556 LIMCH1Q9UPQ0 1083 aa12.7□□□□□ -0.38
PPP4R1-203ENST00000400556 TAF6LQ9Y6J9 622 aa12.7□□□□□ -0.38
PPP4R1-203ENST00000400556 PPFIA3O75145 1194 aa12.7□□□□□ -0.38
PPP4R1-203ENST00000400556 PIP4K2AP48426 406 aaPredicted RBP12.7□□□□□ -0.38
PPP4R1-203ENST00000400556 BEND3Q5T5X7 828 aa12.7□□□□□ -0.38
PPP4R1-203ENST00000400556 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
PPP4R1-203ENST00000400556 TTC14Q96N46 770 aa12.7□□□□□ -0.38
PPP4R1-203ENST00000400556 MAP3K2Q9Y2U5 619 aa12.7□□□□□ -0.38
PPP4R1-203ENST00000400556 BTBD11A6QL63 1104 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 EIF4A1P60842 406 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 HS1BP3Q53T59 392 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 AACSQ86V21 672 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 SSH2Q76I76 1423 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 RGPD1P0DJD0 1748 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 F13A1P00488 732 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 ZNF530Q6P9A1 599 aaPredicted RBP12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 PDCL3Q9H2J4 239 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 CHGBP05060 677 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 IFIT2P09913 472 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 CLASRPQ8N2M8 674 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 PDRG1Q9NUG6 133 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 TLR7Q9NYK1 1049 aaKnown RBP12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 KIAA2012Q0VF49 1180 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 POLA2Q14181 598 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 BOLA2Q9H3K6 86 aa12.69□□□□□ -0.38
PPP4R1-203ENST00000400556 FOSBP53539 338 aa12.68□□□□□ -0.38
PPP4R1-203ENST00000400556 TFIP11Q9UBB9 837 aaKnown RBP12.68□□□□□ -0.38
PPP4R1-203ENST00000400556 AGLP35573 1532 aa12.68□□□□□ -0.38
PPP4R1-203ENST00000400556 ME3Q16798 604 aa12.68□□□□□ -0.38
PPP4R1-203ENST00000400556 CCDC183Q5T5S1 534 aa12.68□□□□□ -0.38
PPP4R1-203ENST00000400556 AP5Z1O43299 807 aa12.68□□□□□ -0.38
PPP4R1-203ENST00000400556 PRDM10Q9NQV6 1147 aa12.68□□□□□ -0.38
PPP4R1-203ENST00000400556 HYPKQ9NX55 129 aa12.68□□□□□ -0.38
PPP4R1-203ENST00000400556 RAB11FIP3O75154 756 aa12.67□□□□□ -0.38
PPP4R1-203ENST00000400556 PHF14O94880 888 aa12.67□□□□□ -0.38
PPP4R1-203ENST00000400556 ST3GAL1Q11201 340 aa12.67□□□□□ -0.38
PPP4R1-203ENST00000400556 PKNOX2Q96KN3 472 aa12.67□□□□□ -0.38
PPP4R1-203ENST00000400556 CKAP2LQ8IYA6 745 aa12.67□□□□□ -0.38
PPP4R1-203ENST00000400556 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.67□□□□□ -0.38
PPP4R1-203ENST00000400556 MTMR6Q9Y217 621 aa12.66□□□□□ -0.38
PPP4R1-203ENST00000400556 HTATSF1O43719 755 aaKnown RBP12.66□□□□□ -0.38
PPP4R1-203ENST00000400556 GLRX3O76003 335 aaKnown RBP12.66□□□□□ -0.38
PPP4R1-203ENST00000400556 RBM8AQ9Y5S9 174 aaKnown RBP12.66□□□□□ -0.38
PPP4R1-203ENST00000400556 MYL6BP14649 208 aa12.66□□□□□ -0.38
PPP4R1-203ENST00000400556 UBE2HP62256 183 aa12.66□□□□□ -0.38
PPP4R1-203ENST00000400556 CDC37L1Q7L3B6 337 aa12.66□□□□□ -0.38
PPP4R1-203ENST00000400556 TPCN1Q9ULQ1 816 aa12.66□□□□□ -0.38
PPP4R1-203ENST00000400556 XRN1Q8IZH2 1706 aaKnown RBP12.66□□□□□ -0.38
PPP4R1-203ENST00000400556 ADCY9O60503 1353 aa12.65□□□□□ -0.38
PPP4R1-203ENST00000400556 NMIQ13287 307 aaPredicted RBP12.65□□□□□ -0.38
PPP4R1-203ENST00000400556 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
PPP4R1-203ENST00000400556 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
PPP4R1-203ENST00000400556 CYP46A1Q9Y6A2 500 aa12.65□□□□□ -0.38
PPP4R1-203ENST00000400556 PLEKHG1Q9ULL1 1385 aa12.65□□□□□ -0.38
PPP4R1-203ENST00000400556 EAF2Q96CJ1 260 aaPredicted RBP12.65□□□□□ -0.38
PPP4R1-203ENST00000400556 CSPP1Q1MSJ5 1256 aa12.65□□□□□ -0.39
PPP4R1-203ENST00000400556 ESCO1Q5FWF5 840 aa12.65□□□□□ -0.39
PPP4R1-203ENST00000400556 LARP1BQ659C4 914 aaKnown RBP12.65□□□□□ -0.39
PPP4R1-203ENST00000400556 SASS6Q6UVJ0 657 aa12.65□□□□□ -0.39
PPP4R1-203ENST00000400556 FMN2Q9NZ56 1722 aa12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 A0A0D9SFI3 127 aa12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 DDX11Q96FC9 970 aa12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 FAM208AQ9UK61 1670 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 CEBPZQ03701 1054 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 NOLC1Q14978 699 aaKnown RBP eCLIP12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 SUCLG2Q96I99 432 aa12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 LIG1P18858 919 aa12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 FSD1Q9BTV5 496 aa12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 LRRC2Q9BYS8 371 aa12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 BICC1Q9H694 974 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-203ENST00000400556 TTC6Q86TZ1 520 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 AOX1Q06278 1338 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 PSME1Q06323 249 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 CREB3L3Q68CJ9 461 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 TUBGCP6Q96RT7 1819 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 UBR1Q8IWV7 1749 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 NALCNQ8IZF0 1738 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 SASH1O94885 1247 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 LUZP1Q86V48 1076 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 PYCARDQ9ULZ3 195 aa12.63□□□□□ -0.39
PPP4R1-203ENST00000400556 ZKSCAN1P17029 563 aaPredicted RBP12.62□□□□□ -0.39
PPP4R1-203ENST00000400556 ZNF589Q86UQ0 364 aaPredicted RBP12.62□□□□□ -0.39
PPP4R1-203ENST00000400556 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
PPP4R1-203ENST00000400556 CCDC171Q6TFL3 1326 aa12.62□□□□□ -0.39
PPP4R1-203ENST00000400556 KDM4AO75164 1064 aa12.62□□□□□ -0.39
PPP4R1-203ENST00000400556 SLFNL1Q499Z3 407 aa12.62□□□□□ -0.39
PPP4R1-203ENST00000400556 RUFY2Q8WXA3 655 aa12.62□□□□□ -0.39
PPP4R1-203ENST00000400556 TOPAZ1Q8N9V7 1692 aa12.62□□□□□ -0.39
PPP4R1-203ENST00000400556 A0A087WWV3 80 aa12.61□□□□□ -0.39
PPP4R1-203ENST00000400556 MCM5P33992 734 aa12.61□□□□□ -0.39
PPP4R1-203ENST00000400556 CCDC129Q6ZRS4 1044 aa12.61□□□□□ -0.39
PPP4R1-203ENST00000400556 DBF4Q9UBU7 674 aaPredicted RBP12.61□□□□□ -0.39
PPP4R1-203ENST00000400556 DIP2AQ14689 1571 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms